RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 APAF1O14727 1248 aa21.77■■□□□ 1.08
PRKCSH-217ENST00000592741 CRBNQ96SW2 442 aa21.77■■□□□ 1.08
PRKCSH-217ENST00000592741 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.07
PRKCSH-217ENST00000592741 ANKRD36BQ8N2N9 1353 aa21.75■■□□□ 1.07
PRKCSH-217ENST00000592741 REREQ9P2R6 1566 aa21.75■■□□□ 1.07
PRKCSH-217ENST00000592741 SHPRHQ149N8 1683 aa21.74■■□□□ 1.07
PRKCSH-217ENST00000592741 TRMT2AQ8IZ69 625 aaKnown RBP21.74■■□□□ 1.07
PRKCSH-217ENST00000592741 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.74■■□□□ 1.07
PRKCSH-217ENST00000592741 NSD2O96028 1365 aa21.74■■□□□ 1.07
PRKCSH-217ENST00000592741 ERICH6Q7L0X2 663 aa21.73■■□□□ 1.07
PRKCSH-217ENST00000592741 TSPOAP1O95153 1857 aa21.72■■□□□ 1.07
PRKCSH-217ENST00000592741 NKTRP30414 1462 aaKnown RBP21.72■■□□□ 1.07
PRKCSH-217ENST00000592741 TCERG1O14776 1098 aaKnown RBP21.72■■□□□ 1.07
PRKCSH-217ENST00000592741 AGLP35573 1532 aa21.72■■□□□ 1.07
PRKCSH-217ENST00000592741 E9PSI1 815 aa21.71■■□□□ 1.07
PRKCSH-217ENST00000592741 NINLQ9Y2I6 1382 aa21.71■■□□□ 1.07
PRKCSH-217ENST00000592741 TNNT2P45379 298 aaPredicted RBP21.7■■□□□ 1.06
PRKCSH-217ENST00000592741 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
PRKCSH-217ENST00000592741 CABP2Q9NPB3 220 aa21.69■■□□□ 1.06
PRKCSH-217ENST00000592741 STK26Q9P289 416 aa21.69■■□□□ 1.06
PRKCSH-217ENST00000592741 PTPRMP28827 1452 aa21.68■■□□□ 1.06
PRKCSH-217ENST00000592741 C20orf194Q5TEA3 1177 aa21.68■■□□□ 1.06
PRKCSH-217ENST00000592741 CFAP53Q96M91 514 aa21.68■■□□□ 1.06
PRKCSH-217ENST00000592741 SAFB2Q14151 953 aaKnown RBP eCLIP21.68■■□□□ 1.06
PRKCSH-217ENST00000592741 FBXO31Q5XUX0 539 aaPredicted RBP21.68■■□□□ 1.06
PRKCSH-217ENST00000592741 YTHDC2Q9H6S0 1430 aaKnown RBP21.67■■□□□ 1.06
PRKCSH-217ENST00000592741 SPINK5Q9NQ38 1064 aaPredicted RBP21.66■■□□□ 1.06
PRKCSH-217ENST00000592741 RUNDC1Q96C34 613 aa21.65■■□□□ 1.06
PRKCSH-217ENST00000592741 CLTCQ00610 1675 aaKnown RBP21.65■■□□□ 1.06
PRKCSH-217ENST00000592741 ATAD2Q6PL18 1390 aa21.65■■□□□ 1.06
PRKCSH-217ENST00000592741 MTHFSP49914 203 aa21.65■■□□□ 1.06
PRKCSH-217ENST00000592741 SRPK2P78362 688 aaKnown RBP21.65■■□□□ 1.06
PRKCSH-217ENST00000592741 STAG3Q9UJ98 1225 aa21.65■■□□□ 1.06
PRKCSH-217ENST00000592741 ALKQ9UM73 1620 aa21.65■■□□□ 1.06
PRKCSH-217ENST00000592741 MS4A1P11836 297 aa21.64■■□□□ 1.06
PRKCSH-217ENST00000592741 ANP32AP39687 249 aaKnown RBP21.64■■□□□ 1.05
PRKCSH-217ENST00000592741 IQSEC2Q5JU85 1478 aa21.63■■□□□ 1.05
PRKCSH-217ENST00000592741 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
PRKCSH-217ENST00000592741 POGKQ9P215 609 aa21.63■■□□□ 1.05
PRKCSH-217ENST00000592741 A0A1W2PP64 1363 aa21.63■■□□□ 1.05
PRKCSH-217ENST00000592741 ABCC11Q96J66 1382 aa21.63■■□□□ 1.05
PRKCSH-217ENST00000592741 WWC1Q8IX03 1113 aa21.62■■□□□ 1.05
PRKCSH-217ENST00000592741 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
PRKCSH-217ENST00000592741 SPATA31D1Q6ZQQ2 1576 aa21.61■■□□□ 1.05
PRKCSH-217ENST00000592741 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
PRKCSH-217ENST00000592741 MINK1Q8N4C8 1332 aaPredicted RBP21.6■■□□□ 1.05
PRKCSH-217ENST00000592741 TERF2IPQ9NYB0 399 aa21.59■■□□□ 1.05
PRKCSH-217ENST00000592741 TCP11L2Q8N4U5 519 aa21.58■■□□□ 1.04
PRKCSH-217ENST00000592741 KDM2BQ8NHM5 1336 aa21.58■■□□□ 1.04
PRKCSH-217ENST00000592741 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.04
PRKCSH-217ENST00000592741 ANKRD26Q9UPS8 1709 aa21.58■■□□□ 1.04
PRKCSH-217ENST00000592741 CENPQQ7L2Z9 268 aaPredicted RBP21.57■■□□□ 1.04
PRKCSH-217ENST00000592741 ARHGEF40Q8TER5 1519 aa21.57■■□□□ 1.04
PRKCSH-217ENST00000592741 NOP58Q9Y2X3 529 aaKnown RBP21.56■■□□□ 1.04
PRKCSH-217ENST00000592741 PDE4AP27815 886 aa21.56■■□□□ 1.04
PRKCSH-217ENST00000592741 BCAR3O75815 825 aa21.55■■□□□ 1.04
PRKCSH-217ENST00000592741 DLC1Q96QB1 1528 aa21.55■■□□□ 1.04
PRKCSH-217ENST00000592741 MED14O60244 1454 aa21.55■■□□□ 1.04
PRKCSH-217ENST00000592741 RIMS2Q9UQ26 1411 aa21.55■■□□□ 1.04
PRKCSH-217ENST00000592741 NEUROD2Q15784 382 aa21.55■■□□□ 1.04
PRKCSH-217ENST00000592741 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
PRKCSH-217ENST00000592741 WDR63Q8IWG1 891 aa21.55■■□□□ 1.04
PRKCSH-217ENST00000592741 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
PRKCSH-217ENST00000592741 RRP7AQ9Y3A4 280 aaKnown RBP21.55■■□□□ 1.04
PRKCSH-217ENST00000592741 CCDC27Q2M243 656 aa21.54■■□□□ 1.04
PRKCSH-217ENST00000592741 IPO9Q96P70 1041 aaKnown RBP21.54■■□□□ 1.04
PRKCSH-217ENST00000592741 CD163L1Q9NR16 1453 aa21.54■■□□□ 1.04
PRKCSH-217ENST00000592741 BACH2Q9BYV9 841 aa21.53■■□□□ 1.04
PRKCSH-217ENST00000592741 HDGFL2Q7Z4V5 671 aaPredicted RBP21.53■■□□□ 1.04
PRKCSH-217ENST00000592741 U2AF1L5P0DN76 240 aaPredicted RBP21.52■■□□□ 1.04
PRKCSH-217ENST00000592741 U2AF1Q01081 240 aaKnown RBP eCLIP21.52■■□□□ 1.04
PRKCSH-217ENST00000592741 ADGRB2O60241 1585 aa21.52■■□□□ 1.04
PRKCSH-217ENST00000592741 MLECQ14165 292 aa21.52■■□□□ 1.03
PRKCSH-217ENST00000592741 CDK19Q9BWU1 502 aa21.52■■□□□ 1.03
PRKCSH-217ENST00000592741 GGNBP2Q9H3C7 697 aa21.52■■□□□ 1.03
PRKCSH-217ENST00000592741 SETD1AO15047 1707 aaKnown RBP21.51■■□□□ 1.03
PRKCSH-217ENST00000592741 PDE3AQ14432 1141 aa21.5■■□□□ 1.03
PRKCSH-217ENST00000592741 NLRP1Q9C000 1473 aa21.49■■□□□ 1.03
PRKCSH-217ENST00000592741 COL3A1P02461 1466 aaPredicted RBP21.49■■□□□ 1.03
PRKCSH-217ENST00000592741 KIF20BQ96Q89 1820 aa21.49■■□□□ 1.03
PRKCSH-217ENST00000592741 FYB1O15117 783 aa21.49■■□□□ 1.03
PRKCSH-217ENST00000592741 KIF13AQ9H1H9 1805 aa21.48■■□□□ 1.03
PRKCSH-217ENST00000592741 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
PRKCSH-217ENST00000592741 ESF1Q9H501 851 aaKnown RBP21.46■■□□□ 1.03
PRKCSH-217ENST00000592741 MYH16Q9H6N6 1097 aa21.46■■□□□ 1.03
PRKCSH-217ENST00000592741 SKAP1Q86WV1 359 aa21.45■■□□□ 1.02
PRKCSH-217ENST00000592741 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.45■■□□□ 1.02
PRKCSH-217ENST00000592741 CABP1Q9NZU7 370 aa21.45■■□□□ 1.02
PRKCSH-217ENST00000592741 ATP7BP35670 1465 aa21.45■■□□□ 1.02
PRKCSH-217ENST00000592741 ZBTB47Q9UFB7 747 aaPredicted RBP21.44■■□□□ 1.02
PRKCSH-217ENST00000592741 NRXN3Q9Y4C0 1643 aa21.43■■□□□ 1.02
PRKCSH-217ENST00000592741 U2SURPO15042 1029 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-217ENST00000592741 RARSP54136 660 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-217ENST00000592741 NPM2Q86SE8 214 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-217ENST00000592741 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
PRKCSH-217ENST00000592741 ZMYM3Q14202 1370 aa21.42■■□□□ 1.02
PRKCSH-217ENST00000592741 WAPLQ7Z5K2 1190 aa21.42■■□□□ 1.02
PRKCSH-217ENST00000592741 MAPK8IP3Q9UPT6 1336 aa21.41■■□□□ 1.02
PRKCSH-217ENST00000592741 PLEKHF1Q96S99 279 aa21.41■■□□□ 1.02
PRKCSH-217ENST00000592741 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms