RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 VPS37DQ86XT2 251 aa15.61■□□□□ 0.09
DNMT1-228ENST00000592705 PANK1Q8TE04 598 aa15.61■□□□□ 0.09
DNMT1-228ENST00000592705 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
DNMT1-228ENST00000592705 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
DNMT1-228ENST00000592705 AMOTL1Q8IY63 956 aa15.6■□□□□ 0.09
DNMT1-228ENST00000592705 PCF11O94913 1555 aaKnown RBP15.59■□□□□ 0.09
DNMT1-228ENST00000592705 C22orf23Q9BZE7 217 aa15.59■□□□□ 0.09
DNMT1-228ENST00000592705 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
DNMT1-228ENST00000592705 HSP90B1P14625 803 aaKnown RBP15.59■□□□□ 0.09
DNMT1-228ENST00000592705 TMEM132EQ6IEE7 984 aa15.59■□□□□ 0.09
DNMT1-228ENST00000592705 TATP17735 454 aaPredicted RBP15.59■□□□□ 0.09
DNMT1-228ENST00000592705 TPM4P67936 248 aa15.59■□□□□ 0.09
DNMT1-228ENST00000592705 EIF2S2P20042 333 aaKnown RBP15.58■□□□□ 0.09
DNMT1-228ENST00000592705 CCDC184Q52MB2 194 aa15.58■□□□□ 0.09
DNMT1-228ENST00000592705 ATP6V1DQ9Y5K8 247 aa15.58■□□□□ 0.08
DNMT1-228ENST00000592705 RILPL2Q969X0 211 aa15.58■□□□□ 0.08
DNMT1-228ENST00000592705 TOMM22Q9NS69 142 aa15.58■□□□□ 0.08
DNMT1-228ENST00000592705 MAGI1Q96QZ7 1491 aaPredicted RBP15.58■□□□□ 0.08
DNMT1-228ENST00000592705 GNAI1P63096 354 aa15.57■□□□□ 0.08
DNMT1-228ENST00000592705 PDE3AQ14432 1141 aa15.57■□□□□ 0.08
DNMT1-228ENST00000592705 NBPF1Q3BBV0 1214 aa15.57■□□□□ 0.08
DNMT1-228ENST00000592705 FOXD4L5Q5VV16 416 aaPredicted RBP15.57■□□□□ 0.08
DNMT1-228ENST00000592705 FOXD4L4Q8WXT5 416 aaPredicted RBP15.57■□□□□ 0.08
DNMT1-228ENST00000592705 RBM42Q9BTD8 480 aaKnown RBP15.57■□□□□ 0.08
DNMT1-228ENST00000592705 BACH2Q9BYV9 841 aa15.57■□□□□ 0.08
DNMT1-228ENST00000592705 ADAMTS2O95450 1211 aa15.55■□□□□ 0.08
DNMT1-228ENST00000592705 HSP90AA2PQ14568 343 aaPredicted RBP15.55■□□□□ 0.08
DNMT1-228ENST00000592705 KIF3AQ9Y496 699 aa15.55■□□□□ 0.08
DNMT1-228ENST00000592705 NINLQ9Y2I6 1382 aa15.55■□□□□ 0.08
DNMT1-228ENST00000592705 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
DNMT1-228ENST00000592705 TCP11L2Q8N4U5 519 aa15.55■□□□□ 0.08
DNMT1-228ENST00000592705 ABCA10Q8WWZ4 1543 aa15.54■□□□□ 0.08
DNMT1-228ENST00000592705 CEBPAP49715 358 aaPredicted RBP15.54■□□□□ 0.08
DNMT1-228ENST00000592705 PLEKHO1Q53GL0 409 aaPredicted RBP15.54■□□□□ 0.08
DNMT1-228ENST00000592705 INTS3Q68E01 1043 aaKnown RBP15.54■□□□□ 0.08
DNMT1-228ENST00000592705 EPRSP07814 1512 aaKnown RBP15.54■□□□□ 0.08
DNMT1-228ENST00000592705 ERBINQ96RT1 1412 aa15.53■□□□□ 0.08
DNMT1-228ENST00000592705 NUCB2P80303 420 aa15.53■□□□□ 0.08
DNMT1-228ENST00000592705 LNPKQ9C0E8 428 aa15.53■□□□□ 0.08
DNMT1-228ENST00000592705 MTHFSP49914 203 aa15.53■□□□□ 0.08
DNMT1-228ENST00000592705 PRAM1Q96QH2 718 aa15.53■□□□□ 0.08
DNMT1-228ENST00000592705 C9orf78Q9NZ63 289 aaPredicted RBP15.53■□□□□ 0.08
DNMT1-228ENST00000592705 DDX54Q8TDD1 881 aaKnown RBP15.52■□□□□ 0.08
DNMT1-228ENST00000592705 CABP2Q9NPB3 220 aa15.52■□□□□ 0.08
DNMT1-228ENST00000592705 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.07
DNMT1-228ENST00000592705 LRRFIP1Q32MZ4 808 aaKnown RBP15.51■□□□□ 0.07
DNMT1-228ENST00000592705 CFAP70Q5T0N1 1121 aa15.51■□□□□ 0.07
DNMT1-228ENST00000592705 PTPN23Q9H3S7 1636 aa15.51■□□□□ 0.07
DNMT1-228ENST00000592705 TEX14Q8IWB6 1497 aa15.51■□□□□ 0.07
DNMT1-228ENST00000592705 RUFY2Q8WXA3 655 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 CCDC34Q96HJ3 373 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 ANKRD30BQ9BXX2 1392 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 PLB1Q6P1J6 1458 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 CUL7Q14999 1698 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 CHMP4CQ96CF2 233 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 CDC45O75419 566 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 ARID3AQ99856 593 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 GGNBP2Q9H3C7 697 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 VPS53Q5VIR6 699 aa15.5■□□□□ 0.07
DNMT1-228ENST00000592705 DIAPH3Q9NSV4 1193 aa15.49■□□□□ 0.07
DNMT1-228ENST00000592705 PDZRN3Q9UPQ7 1066 aa15.49■□□□□ 0.07
DNMT1-228ENST00000592705 CADPS2Q86UW7 1296 aa15.49■□□□□ 0.07
DNMT1-228ENST00000592705 DENND4BO75064 1496 aaPredicted RBP15.49■□□□□ 0.07
DNMT1-228ENST00000592705 MRE11P49959 708 aa15.49■□□□□ 0.07
DNMT1-228ENST00000592705 RPGRIP1LQ68CZ1 1315 aa15.48■□□□□ 0.07
DNMT1-228ENST00000592705 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
DNMT1-228ENST00000592705 RAD21O60216 631 aa15.48■□□□□ 0.07
DNMT1-228ENST00000592705 MARCH6O60337 910 aa15.47■□□□□ 0.07
DNMT1-228ENST00000592705 SPG7Q9UQ90 795 aa15.47■□□□□ 0.07
DNMT1-228ENST00000592705 XPCQ01831 940 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-228ENST00000592705 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
DNMT1-228ENST00000592705 ANO8Q9HCE9 1232 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-228ENST00000592705 H3BQV1 296 aa15.46■□□□□ 0.07
DNMT1-228ENST00000592705 BCAR3O75815 825 aa15.46■□□□□ 0.07
DNMT1-228ENST00000592705 CT47B1P0C2W7 299 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-228ENST00000592705 IFFO2Q5TF58 517 aa15.46■□□□□ 0.07
DNMT1-228ENST00000592705 WDR63Q8IWG1 891 aa15.46■□□□□ 0.07
DNMT1-228ENST00000592705 CCAR1Q8IX12 1150 aaKnown RBP15.46■□□□□ 0.07
DNMT1-228ENST00000592705 KIF6Q6ZMV9 814 aa15.46■□□□□ 0.07
DNMT1-228ENST00000592705 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.07
DNMT1-228ENST00000592705 ZKSCAN1P17029 563 aaPredicted RBP15.46■□□□□ 0.06
DNMT1-228ENST00000592705 GRIN2AQ12879 1464 aa15.45■□□□□ 0.06
DNMT1-228ENST00000592705 NCOA1Q15788 1441 aa15.45■□□□□ 0.06
DNMT1-228ENST00000592705 HMOX1P09601 288 aa15.45■□□□□ 0.06
DNMT1-228ENST00000592705 ADGRL1O94910 1474 aa15.45■□□□□ 0.06
DNMT1-228ENST00000592705 ANO2Q9NQ90 1003 aa15.45■□□□□ 0.06
DNMT1-228ENST00000592705 LRPPRCP42704 1394 aaKnown RBP15.45■□□□□ 0.06
DNMT1-228ENST00000592705 EXOSC9Q06265 439 aaKnown RBP15.44■□□□□ 0.06
DNMT1-228ENST00000592705 C11orf95C9JLR9 678 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-228ENST00000592705 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
DNMT1-228ENST00000592705 SF3A1Q15459 793 aaKnown RBP15.44■□□□□ 0.06
DNMT1-228ENST00000592705 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
DNMT1-228ENST00000592705 FAM184AQ8NB25 1140 aa15.44■□□□□ 0.06
DNMT1-228ENST00000592705 TCEAL9Q9UHQ7 104 aa15.44■□□□□ 0.06
DNMT1-228ENST00000592705 IQGAP2Q13576 1575 aa15.44■□□□□ 0.06
DNMT1-228ENST00000592705 CABP4P57796 275 aa15.44■□□□□ 0.06
DNMT1-228ENST00000592705 TSPYL4Q9UJ04 414 aa15.44■□□□□ 0.06
DNMT1-228ENST00000592705 FKBP5Q13451 457 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-228ENST00000592705 FOXD4L6Q3SYB3 417 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-228ENST00000592705 FOXD4L3Q6VB84 417 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms