RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
SPC24-206ENST00000592540 TCP11L2Q8N4U5 519 aa22.9■■□□□ 1.26
SPC24-206ENST00000592540 MYO3AQ8NEV4 1616 aa22.89■■□□□ 1.26
SPC24-206ENST00000592540 MYOM2P54296 1465 aa22.89■■□□□ 1.26
SPC24-206ENST00000592540 WDR63Q8IWG1 891 aa22.89■■□□□ 1.25
SPC24-206ENST00000592540 RTEL1-TNFRSF6BF6WH68 1400 aa22.88■■□□□ 1.25
SPC24-206ENST00000592540 ZFYVE16Q7Z3T8 1539 aa22.88■■□□□ 1.25
SPC24-206ENST00000592540 BCL2L13Q9BXK5 485 aa22.87■■□□□ 1.25
SPC24-206ENST00000592540 ADGRF5Q8IZF2 1346 aa22.86■■□□□ 1.25
SPC24-206ENST00000592540 MORC1Q86VD1 984 aa22.86■■□□□ 1.25
SPC24-206ENST00000592540 KIF1BO60333 1816 aa22.86■■□□□ 1.25
SPC24-206ENST00000592540 CHD1O14646 1710 aa22.86■■□□□ 1.25
SPC24-206ENST00000592540 IFT172Q9UG01 1749 aa22.86■■□□□ 1.25
SPC24-206ENST00000592540 VWDEQ8N2E2 1590 aa22.85■■□□□ 1.25
SPC24-206ENST00000592540 SBNO2Q9Y2G9 1366 aa22.85■■□□□ 1.25
SPC24-206ENST00000592540 XRCC6P12956 609 aaKnown RBP eCLIP22.85■■□□□ 1.25
SPC24-206ENST00000592540 MCM4P33991 863 aa22.85■■□□□ 1.25
SPC24-206ENST00000592540 NSD3Q9BZ95 1437 aa22.85■■□□□ 1.25
SPC24-206ENST00000592540 FSD2A1L4K1 749 aa22.85■■□□□ 1.25
SPC24-206ENST00000592540 GOLGA6L3A6NEY3 463 aa22.84■■□□□ 1.25
SPC24-206ENST00000592540 KANK1Q14678 1352 aa22.84■■□□□ 1.25
SPC24-206ENST00000592540 TNNT2P45379 298 aaPredicted RBP22.83■■□□□ 1.25
SPC24-206ENST00000592540 AFAP1Q8N556 730 aa22.83■■□□□ 1.25
SPC24-206ENST00000592540 SPRYD3Q8NCJ5 442 aa22.83■■□□□ 1.25
SPC24-206ENST00000592540 UGGT1Q9NYU2 1555 aa22.83■■□□□ 1.24
SPC24-206ENST00000592540 ZCCHC11Q5TAX3 1644 aaKnown RBP22.83■■□□□ 1.24
SPC24-206ENST00000592540 CCDC27Q2M243 656 aa22.82■■□□□ 1.24
SPC24-206ENST00000592540 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
SPC24-206ENST00000592540 MVPQ14764 893 aaKnown RBP22.81■■□□□ 1.24
SPC24-206ENST00000592540 ARXQ96QS3 562 aa22.8■■□□□ 1.24
SPC24-206ENST00000592540 C22orf23Q9BZE7 217 aa22.8■■□□□ 1.24
SPC24-206ENST00000592540 CHMP5Q9NZZ3 219 aa22.8■■□□□ 1.24
SPC24-206ENST00000592540 MYH16Q9H6N6 1097 aa22.79■■□□□ 1.24
SPC24-206ENST00000592540 MROH2AA6NES4 1674 aa22.78■■□□□ 1.24
SPC24-206ENST00000592540 ZNF518AQ6AHZ1 1483 aa22.78■■□□□ 1.24
SPC24-206ENST00000592540 GZF1Q9H116 711 aaPredicted RBP22.78■■□□□ 1.24
SPC24-206ENST00000592540 ZC3H13Q5T200 1668 aaKnown RBP22.78■■□□□ 1.24
SPC24-206ENST00000592540 NRXN1Q9ULB1 1477 aa22.77■■□□□ 1.24
SPC24-206ENST00000592540 USP32Q8NFA0 1604 aa22.77■■□□□ 1.24
SPC24-206ENST00000592540 MTHFSP49914 203 aa22.76■■□□□ 1.23
SPC24-206ENST00000592540 ZKSCAN2Q63HK3 967 aa22.76■■□□□ 1.23
SPC24-206ENST00000592540 MFAP1P55081 439 aaKnown RBP22.76■■□□□ 1.23
SPC24-206ENST00000592540 PANK2Q9BZ23 570 aa22.76■■□□□ 1.23
SPC24-206ENST00000592540 SLC12A5Q9H2X9 1139 aa22.76■■□□□ 1.23
SPC24-206ENST00000592540 TRAK2O60296 914 aa22.75■■□□□ 1.23
SPC24-206ENST00000592540 DZIP1LQ8IYY4 767 aaKnown RBP22.75■■□□□ 1.23
SPC24-206ENST00000592540 QRICH2Q9H0J4 1663 aa22.75■■□□□ 1.23
SPC24-206ENST00000592540 NCBP3Q53F19 620 aaKnown RBP22.75■■□□□ 1.23
SPC24-206ENST00000592540 FTSJ3Q8IY81 847 aaKnown RBP22.75■■□□□ 1.23
SPC24-206ENST00000592540 SETBP1Q9Y6X0 1596 aa22.75■■□□□ 1.23
SPC24-206ENST00000592540 KIF3BO15066 747 aa22.74■■□□□ 1.23
SPC24-206ENST00000592540 CFAP53Q96M91 514 aa22.74■■□□□ 1.23
SPC24-206ENST00000592540 ATP7AQ04656 1500 aa22.74■■□□□ 1.23
SPC24-206ENST00000592540 INO80Q9ULG1 1556 aaPredicted RBP22.74■■□□□ 1.23
SPC24-206ENST00000592540 ARAP3Q8WWN8 1544 aa22.73■■□□□ 1.23
SPC24-206ENST00000592540 MROH1Q8NDA8 1641 aa22.73■■□□□ 1.23
SPC24-206ENST00000592540 ADGRB2O60241 1585 aa22.72■■□□□ 1.23
SPC24-206ENST00000592540 HDAC1Q13547 482 aaPredicted RBP22.71■■□□□ 1.23
SPC24-206ENST00000592540 CLCN1P35523 988 aa22.71■■□□□ 1.23
SPC24-206ENST00000592540 CT47B1P0C2W7 299 aaPredicted RBP22.7■■□□□ 1.22
SPC24-206ENST00000592540 MRE11P49959 708 aa22.7■■□□□ 1.22
SPC24-206ENST00000592540 TRAK1Q9UPV9 953 aa22.69■■□□□ 1.22
SPC24-206ENST00000592540 ADGRL1O94910 1474 aa22.69■■□□□ 1.22
SPC24-206ENST00000592540 EFCAB6Q5THR3 1501 aa22.69■■□□□ 1.22
SPC24-206ENST00000592540 HSCBQ8IWL3 235 aa22.69■■□□□ 1.22
SPC24-206ENST00000592540 ZNF692Q9BU19 519 aaPredicted RBP22.69■■□□□ 1.22
SPC24-206ENST00000592540 NOS1P29475 1434 aa22.68■■□□□ 1.22
SPC24-206ENST00000592540 PNNQ9H307 717 aaKnown RBP22.68■■□□□ 1.22
SPC24-206ENST00000592540 U2AF1L5P0DN76 240 aaPredicted RBP22.68■■□□□ 1.22
SPC24-206ENST00000592540 U2AF1Q01081 240 aaKnown RBP eCLIP22.68■■□□□ 1.227e-7■■□□□ 13.3
SPC24-206ENST00000592540 DDX11L8A8MPP1 907 aa22.67■■□□□ 1.22
SPC24-206ENST00000592540 SMC4Q9NTJ3 1288 aa22.67■■□□□ 1.22
SPC24-206ENST00000592540 TRIM27P14373 513 aa22.66■■□□□ 1.22
SPC24-206ENST00000592540 TSR2Q969E8 191 aaKnown RBP22.66■■□□□ 1.22
SPC24-206ENST00000592540 DDX19BQ9UMR2 479 aa22.66■■□□□ 1.22
SPC24-206ENST00000592540 NCOA3Q9Y6Q9 1424 aa22.66■■□□□ 1.22
SPC24-206ENST00000592540 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
SPC24-206ENST00000592540 SMC5Q8IY18 1101 aa22.65■■□□□ 1.22
SPC24-206ENST00000592540 PPRC1Q5VV67 1664 aaKnown RBP22.65■■□□□ 1.22
SPC24-206ENST00000592540 NAP1L5Q96NT1 182 aaPredicted RBP22.65■■□□□ 1.22
SPC24-206ENST00000592540 ADGRB3O60242 1522 aa22.64■■□□□ 1.22
SPC24-206ENST00000592540 EXOSC9Q06265 439 aaKnown RBP22.64■■□□□ 1.22
SPC24-206ENST00000592540 ITPRIPQ8IWB1 547 aa22.64■■□□□ 1.22
SPC24-206ENST00000592540 DDIT3P35638 169 aa22.64■■□□□ 1.21
SPC24-206ENST00000592540 GRPEL1Q9HAV7 217 aa22.64■■□□□ 1.21
SPC24-206ENST00000592540 PPLO60437 1756 aa22.63■■□□□ 1.21
SPC24-206ENST00000592540 ATF7IPQ6VMQ6 1270 aa22.63■■□□□ 1.21
SPC24-206ENST00000592540 SSH1Q8WYL5 1049 aa22.63■■□□□ 1.21
SPC24-206ENST00000592540 ADGRB1O14514 1584 aa22.62■■□□□ 1.21
SPC24-206ENST00000592540 C14orf93Q9H972 538 aaKnown RBP22.62■■□□□ 1.21
SPC24-206ENST00000592540 ISY1Q9ULR0 285 aaKnown RBP22.62■■□□□ 1.21
SPC24-206ENST00000592540 NSD2O96028 1365 aa22.61■■□□□ 1.21
SPC24-206ENST00000592540 RBM25P49756 843 aaKnown RBP22.61■■□□□ 1.21
SPC24-206ENST00000592540 ABCA9Q8IUA7 1624 aa22.61■■□□□ 1.21
SPC24-206ENST00000592540 SNX21Q969T3 373 aa22.6■■□□□ 1.21
SPC24-206ENST00000592540 FANCAO15360 1455 aa22.6■■□□□ 1.21
SPC24-206ENST00000592540 CD109Q6YHK3 1445 aa22.59■■□□□ 1.21
SPC24-206ENST00000592540 CHGAP10645 457 aaKnown RBP22.58■■□□□ 1.21
SPC24-206ENST00000592540 TMEM132EQ6IEE7 984 aa22.58■■□□□ 1.21
SPC24-206ENST00000592540 ZBTB40Q9NUA8 1239 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms