RNA–Protein interactions for RNA: ENST00000592320.6

GFAP-222, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-222ENST00000592320 LAMC1P11047 1609 aa17.12■□□□□ 0.33
GFAP-222ENST00000592320 AFF2P51816 1311 aa17.12■□□□□ 0.33
GFAP-222ENST00000592320 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.12■□□□□ 0.33
GFAP-222ENST00000592320 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
GFAP-222ENST00000592320 TRPM1Q7Z4N2 1603 aa17.1■□□□□ 0.33
GFAP-222ENST00000592320 KIAA1210Q9ULL0 1709 aa17.1■□□□□ 0.33
GFAP-222ENST00000592320 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
GFAP-222ENST00000592320 NBPF1Q3BBV0 1214 aa17.09■□□□□ 0.33
GFAP-222ENST00000592320 METP08581 1390 aa17.08■□□□□ 0.32
GFAP-222ENST00000592320 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.32
GFAP-222ENST00000592320 PIK3R4Q99570 1358 aa17.08■□□□□ 0.32
GFAP-222ENST00000592320 ADGRB1O14514 1584 aa17.07■□□□□ 0.32
GFAP-222ENST00000592320 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
GFAP-222ENST00000592320 RGS12O14924 1447 aa17.07■□□□□ 0.32
GFAP-222ENST00000592320 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
GFAP-222ENST00000592320 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
GFAP-222ENST00000592320 QTRT2Q9H974 415 aaKnown RBP17.06■□□□□ 0.32
GFAP-222ENST00000592320 C8orf37Q96NL8 207 aa17.05■□□□□ 0.32
GFAP-222ENST00000592320 CARD11Q9BXL7 1154 aa17.05■□□□□ 0.32
GFAP-222ENST00000592320 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
GFAP-222ENST00000592320 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
GFAP-222ENST00000592320 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
GFAP-222ENST00000592320 LRRC59Q96AG4 307 aaKnown RBP17.03■□□□□ 0.32
GFAP-222ENST00000592320 DCCP43146 1447 aa17.03■□□□□ 0.32
GFAP-222ENST00000592320 PTPRUQ92729 1446 aa17.03■□□□□ 0.32
GFAP-222ENST00000592320 STK26Q9P289 416 aa17.02■□□□□ 0.32
GFAP-222ENST00000592320 ABCC11Q96J66 1382 aa17.02■□□□□ 0.31
GFAP-222ENST00000592320 TECPR2O15040 1411 aa16.99■□□□□ 0.31
GFAP-222ENST00000592320 MST1RQ04912 1400 aa16.99■□□□□ 0.31
GFAP-222ENST00000592320 NGLY1Q96IV0 654 aa16.99■□□□□ 0.31
GFAP-222ENST00000592320 TRAK1Q9UPV9 953 aa16.99■□□□□ 0.31
GFAP-222ENST00000592320 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
GFAP-222ENST00000592320 DLC1Q96QB1 1528 aa16.98■□□□□ 0.31
GFAP-222ENST00000592320 NHSL1Q5SYE7 1610 aa16.98■□□□□ 0.31
GFAP-222ENST00000592320 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
GFAP-222ENST00000592320 PNPLA6Q8IY17 1366 aa16.98■□□□□ 0.31
GFAP-222ENST00000592320 USP47Q96K76 1375 aa16.98■□□□□ 0.31
GFAP-222ENST00000592320 XRN1Q8IZH2 1706 aaKnown RBP16.98■□□□□ 0.31
GFAP-222ENST00000592320 PTCH1Q13635 1447 aa16.97■□□□□ 0.31
GFAP-222ENST00000592320 SIRT1Q96EB6 747 aa16.97■□□□□ 0.31
GFAP-222ENST00000592320 ZRANB1Q9UGI0 708 aa16.97■□□□□ 0.31
GFAP-222ENST00000592320 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
GFAP-222ENST00000592320 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.3
GFAP-222ENST00000592320 ROBO2Q9HCK4 1378 aa16.95■□□□□ 0.3
GFAP-222ENST00000592320 ADAMTS2O95450 1211 aa16.95■□□□□ 0.3
GFAP-222ENST00000592320 EIF4G2P78344 907 aaKnown RBP eCLIP16.95■□□□□ 0.3
GFAP-222ENST00000592320 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
GFAP-222ENST00000592320 POGKQ9P215 609 aa16.94■□□□□ 0.3
GFAP-222ENST00000592320 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
GFAP-222ENST00000592320 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
GFAP-222ENST00000592320 USP21Q9UK80 565 aa16.92■□□□□ 0.3
GFAP-222ENST00000592320 PLEKHH1Q9ULM0 1364 aa16.91■□□□□ 0.3
GFAP-222ENST00000592320 ARHGEF28Q8N1W1 1705 aaKnown RBP16.91■□□□□ 0.3
GFAP-222ENST00000592320 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
GFAP-222ENST00000592320 TRPC5Q9UL62 973 aaPredicted RBP16.91■□□□□ 0.3
GFAP-222ENST00000592320 ADGRL3Q9HAR2 1447 aa16.9■□□□□ 0.3
GFAP-222ENST00000592320 ST20-MTHFSA0A0A6YYL1 179 aa16.9■□□□□ 0.3
GFAP-222ENST00000592320 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
GFAP-222ENST00000592320 SBNO2Q9Y2G9 1366 aa16.87■□□□□ 0.29
GFAP-222ENST00000592320 CCDC125Q86Z20 511 aa16.86■□□□□ 0.29
GFAP-222ENST00000592320 C1orf167Q5SNV9 1468 aa16.86■□□□□ 0.29
GFAP-222ENST00000592320 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
GFAP-222ENST00000592320 FNBP4Q8N3X1 1017 aaPredicted RBP16.85■□□□□ 0.29
GFAP-222ENST00000592320 TESK2Q96S53 571 aa16.85■□□□□ 0.29
GFAP-222ENST00000592320 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
GFAP-222ENST00000592320 ATRNO75882 1429 aa16.85■□□□□ 0.29
GFAP-222ENST00000592320 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
GFAP-222ENST00000592320 SOS2Q07890 1332 aaPredicted RBP16.84■□□□□ 0.29
GFAP-222ENST00000592320 QRICH2Q9H0J4 1663 aa16.84■□□□□ 0.29
GFAP-222ENST00000592320 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
GFAP-222ENST00000592320 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
GFAP-222ENST00000592320 ADGRB2O60241 1585 aa16.81■□□□□ 0.28
GFAP-222ENST00000592320 TMF1P82094 1093 aa16.81■□□□□ 0.28
GFAP-222ENST00000592320 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
GFAP-222ENST00000592320 SRCAPQ6ZRS2 3230 aa16.8■□□□□ 0.28
GFAP-222ENST00000592320 WASLO00401 505 aaPredicted RBP16.79■□□□□ 0.28
GFAP-222ENST00000592320 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
GFAP-222ENST00000592320 CDC42BPGQ6DT37 1551 aa16.78■□□□□ 0.28
GFAP-222ENST00000592320 CDCA8Q53HL2 280 aa16.77■□□□□ 0.28
GFAP-222ENST00000592320 CDK19Q9BWU1 502 aa16.77■□□□□ 0.28
GFAP-222ENST00000592320 BCL9LQ86UU0 1499 aa16.77■□□□□ 0.28
GFAP-222ENST00000592320 GJD4Q96KN9 370 aaPredicted RBP16.76■□□□□ 0.27
GFAP-222ENST00000592320 COL22A1Q8NFW1 1626 aaPredicted RBP16.76■□□□□ 0.27
GFAP-222ENST00000592320 SRPK2P78362 688 aaKnown RBP16.75■□□□□ 0.27
GFAP-222ENST00000592320 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
GFAP-222ENST00000592320 BLMP54132 1417 aaPredicted RBP16.74■□□□□ 0.27
GFAP-222ENST00000592320 CABP2Q9NPB3 220 aa16.74■□□□□ 0.27
GFAP-222ENST00000592320 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
GFAP-222ENST00000592320 NPHP3Q7Z494 1330 aa16.72■□□□□ 0.27
GFAP-222ENST00000592320 ANKARQ7Z5J8 1434 aa16.72■□□□□ 0.27
GFAP-222ENST00000592320 ZNF316A6NFI3 1004 aaPredicted RBP16.72■□□□□ 0.27
GFAP-222ENST00000592320 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.27
GFAP-222ENST00000592320 SF3B2Q13435 895 aaKnown RBP16.71■□□□□ 0.27
GFAP-222ENST00000592320 ESCO1Q5FWF5 840 aa16.71■□□□□ 0.27
GFAP-222ENST00000592320 DEFB132Q7Z7B7 95 aa16.71■□□□□ 0.27
GFAP-222ENST00000592320 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
GFAP-222ENST00000592320 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
GFAP-222ENST00000592320 ATP7BP35670 1465 aa16.7■□□□□ 0.26
GFAP-222ENST00000592320 NUTM2FA1L443 756 aa16.7■□□□□ 0.26
GFAP-222ENST00000592320 NUDT16Q96DE0 195 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms