RNA–Protein interactions for RNA: ENST00000591745.1

LSM7-207, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 543 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-207ENST00000591745 LAMC1P11047 1609 aa19.84■□□□□ 0.77
LSM7-207ENST00000591745 SIN3AQ96ST3 1273 aa19.83■□□□□ 0.77
LSM7-207ENST00000591745 CHGAP10645 457 aaKnown RBP19.82■□□□□ 0.76
LSM7-207ENST00000591745 ATAD2Q6PL18 1390 aa19.8■□□□□ 0.76
LSM7-207ENST00000591745 ADAMTS2O95450 1211 aa19.79■□□□□ 0.76
LSM7-207ENST00000591745 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
LSM7-207ENST00000591745 ADGRL3Q9HAR2 1447 aa19.77■□□□□ 0.76
LSM7-207ENST00000591745 LRRC59Q96AG4 307 aaKnown RBP19.77■□□□□ 0.76
LSM7-207ENST00000591745 METP08581 1390 aa19.77■□□□□ 0.76
LSM7-207ENST00000591745 STAC3Q96MF2 364 aa19.76■□□□□ 0.75
LSM7-207ENST00000591745 MARF1Q9Y4F3 1742 aaKnown RBP19.76■□□□□ 0.75
LSM7-207ENST00000591745 ATRNO75882 1429 aa19.76■□□□□ 0.75
LSM7-207ENST00000591745 HDGFP51858 240 aaKnown RBP19.75■□□□□ 0.75
LSM7-207ENST00000591745 COL22A1Q8NFW1 1626 aaPredicted RBP19.75■□□□□ 0.75
LSM7-207ENST00000591745 NGLY1Q96IV0 654 aa19.74■□□□□ 0.75
LSM7-207ENST00000591745 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
LSM7-207ENST00000591745 C1orf167Q5SNV9 1468 aa19.73■□□□□ 0.75
LSM7-207ENST00000591745 BRWD3Q6RI45 1802 aa19.72■□□□□ 0.75
LSM7-207ENST00000591745 ZRANB1Q9UGI0 708 aa19.72■□□□□ 0.75
LSM7-207ENST00000591745 CCDC144AA2RUR9 1427 aa19.71■□□□□ 0.75
LSM7-207ENST00000591745 USP21Q9UK80 565 aa19.71■□□□□ 0.75
LSM7-207ENST00000591745 SPHKAPQ2M3C7 1700 aa19.71■□□□□ 0.75
LSM7-207ENST00000591745 MYOM2P54296 1465 aa19.67■□□□□ 0.74
LSM7-207ENST00000591745 BCL9LQ86UU0 1499 aa19.67■□□□□ 0.74
LSM7-207ENST00000591745 NEXMIFQ5QGS0 1516 aa19.67■□□□□ 0.74
LSM7-207ENST00000591745 GLI3P10071 1580 aa19.67■□□□□ 0.74
LSM7-207ENST00000591745 LRP5O75197 1615 aa19.67■□□□□ 0.74
LSM7-207ENST00000591745 FNBP4Q8N3X1 1017 aaPredicted RBP19.67■□□□□ 0.74
LSM7-207ENST00000591745 ORAI2Q96SN7 254 aa19.67■□□□□ 0.74
LSM7-207ENST00000591745 SOS2Q07890 1332 aaPredicted RBP19.67■□□□□ 0.74
LSM7-207ENST00000591745 PTCH1Q13635 1447 aa19.67■□□□□ 0.74
LSM7-207ENST00000591745 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
LSM7-207ENST00000591745 TRPC5Q9UL62 973 aaPredicted RBP19.66■□□□□ 0.74
LSM7-207ENST00000591745 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.65■□□□□ 0.74
LSM7-207ENST00000591745 CLTCL1P53675 1640 aa19.64■□□□□ 0.73
LSM7-207ENST00000591745 ROBO2Q9HCK4 1378 aa19.6■□□□□ 0.73
LSM7-207ENST00000591745 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
LSM7-207ENST00000591745 PXDNQ92626 1479 aa19.6■□□□□ 0.73
LSM7-207ENST00000591745 DEFB132Q7Z7B7 95 aa19.59■□□□□ 0.73
LSM7-207ENST00000591745 DIEXFQ68CQ4 756 aaKnown RBP19.58■□□□□ 0.72
LSM7-207ENST00000591745 RALGAPBQ86X10 1494 aa19.56■□□□□ 0.72
LSM7-207ENST00000591745 BLMP54132 1417 aaPredicted RBP19.55■□□□□ 0.72
LSM7-207ENST00000591745 KIF1BO60333 1816 aa19.53■□□□□ 0.72
LSM7-207ENST00000591745 EIF4G2P78344 907 aaKnown RBP eCLIP19.53■□□□□ 0.72
LSM7-207ENST00000591745 CCDC125Q86Z20 511 aa19.53■□□□□ 0.72
LSM7-207ENST00000591745 GJD4Q96KN9 370 aaPredicted RBP19.53■□□□□ 0.72
LSM7-207ENST00000591745 SLIT2O94813 1529 aa19.52■□□□□ 0.72
LSM7-207ENST00000591745 XPCQ01831 940 aaPredicted RBP19.52■□□□□ 0.72
LSM7-207ENST00000591745 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.72
LSM7-207ENST00000591745 PRAG1Q86YV5 1406 aa19.51■□□□□ 0.71
LSM7-207ENST00000591745 CDC42BPGQ6DT37 1551 aa19.51■□□□□ 0.71
LSM7-207ENST00000591745 PLCH1Q4KWH8 1693 aa19.5■□□□□ 0.71
LSM7-207ENST00000591745 USP32Q8NFA0 1604 aa19.5■□□□□ 0.71
LSM7-207ENST00000591745 ABCA3Q99758 1704 aa19.48■□□□□ 0.71
LSM7-207ENST00000591745 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
LSM7-207ENST00000591745 DCAF11Q8TEB1 546 aa19.47■□□□□ 0.71
LSM7-207ENST00000591745 RPGRIP1LQ68CZ1 1315 aa19.47■□□□□ 0.71
LSM7-207ENST00000591745 PPLO60437 1756 aa19.47■□□□□ 0.71
LSM7-207ENST00000591745 PSDA5PKW4 1024 aaPredicted RBP19.46■□□□□ 0.71
LSM7-207ENST00000591745 SLC24A1O60721 1099 aa19.44■□□□□ 0.7
LSM7-207ENST00000591745 RGPD8O14715 1765 aaPredicted RBP19.44■□□□□ 0.7
LSM7-207ENST00000591745 UNC5CLQ8IV45 518 aa19.43■□□□□ 0.7
LSM7-207ENST00000591745 FMN2Q9NZ56 1722 aa19.42■□□□□ 0.7
LSM7-207ENST00000591745 FOXO3O43524 673 aa19.42■□□□□ 0.7
LSM7-207ENST00000591745 ESCO1Q5FWF5 840 aa19.42■□□□□ 0.7
LSM7-207ENST00000591745 NPHP3Q7Z494 1330 aa19.42■□□□□ 0.7
LSM7-207ENST00000591745 NWD2Q9ULI1 1742 aa19.42■□□□□ 0.7
LSM7-207ENST00000591745 NBPF8Q3BBV2 869 aa19.41■□□□□ 0.7
LSM7-207ENST00000591745 SEPT12Q8IYM1 358 aa19.41■□□□□ 0.7
LSM7-207ENST00000591745 NRAPQ86VF7 1730 aa19.41■□□□□ 0.7
LSM7-207ENST00000591745 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.7
LSM7-207ENST00000591745 NUTM2FA1L443 756 aa19.39■□□□□ 0.69
LSM7-207ENST00000591745 GPRASP1Q5JY77 1395 aa19.39■□□□□ 0.69
LSM7-207ENST00000591745 KIF1AQ12756 1690 aa19.37■□□□□ 0.69
LSM7-207ENST00000591745 RGL3Q3MIN7 710 aa19.37■□□□□ 0.69
LSM7-207ENST00000591745 ROCK2O75116 1388 aaKnown RBP19.36■□□□□ 0.69
LSM7-207ENST00000591745 HSPA5P11021 654 aaKnown RBP19.36■□□□□ 0.69
LSM7-207ENST00000591745 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
LSM7-207ENST00000591745 RGPD1P0DJD0 1748 aa19.36■□□□□ 0.69
LSM7-207ENST00000591745 KIAA1210Q9ULL0 1709 aa19.36■□□□□ 0.69
LSM7-207ENST00000591745 PLEKHH1Q9ULM0 1364 aa19.35■□□□□ 0.69
LSM7-207ENST00000591745 SPATA31A3Q5VYP0 1347 aa19.35■□□□□ 0.69
LSM7-207ENST00000591745 KNDC1Q76NI1 1749 aa19.35■□□□□ 0.69
LSM7-207ENST00000591745 IFT172Q9UG01 1749 aa19.35■□□□□ 0.69
LSM7-207ENST00000591745 KDM2AQ9Y2K7 1162 aa19.35■□□□□ 0.69
LSM7-207ENST00000591745 TRPM1Q7Z4N2 1603 aa19.34■□□□□ 0.69
LSM7-207ENST00000591745 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.68
LSM7-207ENST00000591745 CABLES1Q8TDN4 633 aa19.33■□□□□ 0.68
LSM7-207ENST00000591745 USP47Q96K76 1375 aa19.32■□□□□ 0.68
LSM7-207ENST00000591745 VPS72Q15906 364 aa19.32■□□□□ 0.68
LSM7-207ENST00000591745 WAPLQ7Z5K2 1190 aa19.32■□□□□ 0.68
LSM7-207ENST00000591745 ONECUT3O60422 494 aaPredicted RBP19.31■□□□□ 0.68
LSM7-207ENST00000591745 SF3B2Q13435 895 aaKnown RBP19.31■□□□□ 0.68
LSM7-207ENST00000591745 KRT27Q7Z3Y8 459 aa19.31■□□□□ 0.68
LSM7-207ENST00000591745 VGFO15240 615 aaPredicted RBP19.3■□□□□ 0.68
LSM7-207ENST00000591745 PLEKHG5O94827 1062 aa19.3■□□□□ 0.68
LSM7-207ENST00000591745 TECPR2O15040 1411 aa19.29■□□□□ 0.68
LSM7-207ENST00000591745 EN1Q05925 392 aaPredicted RBP19.29■□□□□ 0.68
LSM7-207ENST00000591745 FAM182BQ5T319 152 aa19.29■□□□□ 0.68
LSM7-207ENST00000591745 NRXN1Q9ULB1 1477 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms