RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 BRINP3Q76B58 766 aa14.21□□□□□ -0.13
BRCA1-226ENST00000591534 MYO5BQ9ULV0 1848 aa14.2□□□□□ -0.14
BRCA1-226ENST00000591534 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-226ENST00000591534 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
BRCA1-226ENST00000591534 REM2Q8IYK8 340 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-226ENST00000591534 LRRC59Q96AG4 307 aaKnown RBP14.19□□□□□ -0.14
BRCA1-226ENST00000591534 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
BRCA1-226ENST00000591534 COL16A1Q07092 1604 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-226ENST00000591534 AHDC1Q5TGY3 1603 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-226ENST00000591534 PTPRUQ92729 1446 aa14.17□□□□□ -0.14
BRCA1-226ENST00000591534 RXRBP28702 533 aa14.17□□□□□ -0.14
BRCA1-226ENST00000591534 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-226ENST00000591534 SETBP1Q9Y6X0 1596 aa14.17□□□□□ -0.14
BRCA1-226ENST00000591534 NUTM2BA6NNL0 878 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-226ENST00000591534 NUTM2EB1AL46 878 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-226ENST00000591534 NUTM2AQ8IVF1 878 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-226ENST00000591534 TRIM52Q96A61 297 aa14.16□□□□□ -0.14
BRCA1-226ENST00000591534 RPGRIP1LQ68CZ1 1315 aa14.15□□□□□ -0.14
BRCA1-226ENST00000591534 METP08581 1390 aa14.15□□□□□ -0.14
BRCA1-226ENST00000591534 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-226ENST00000591534 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-226ENST00000591534 SETD5Q9C0A6 1442 aa14.14□□□□□ -0.15
BRCA1-226ENST00000591534 SPHKAPQ2M3C7 1700 aa14.13□□□□□ -0.15
BRCA1-226ENST00000591534 MST1RQ04912 1400 aa14.13□□□□□ -0.15
BRCA1-226ENST00000591534 ADGRL3Q9HAR2 1447 aa14.13□□□□□ -0.15
BRCA1-226ENST00000591534 RRBP1Q9P2E9 1410 aaKnown RBP14.13□□□□□ -0.15
BRCA1-226ENST00000591534 LRP6O75581 1613 aa14.12□□□□□ -0.15
BRCA1-226ENST00000591534 ASXL1Q8IXJ9 1541 aa14.12□□□□□ -0.15
BRCA1-226ENST00000591534 PLCB2Q00722 1185 aa14.12□□□□□ -0.15
BRCA1-226ENST00000591534 NAIPQ13075 1403 aa14.12□□□□□ -0.15
BRCA1-226ENST00000591534 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
BRCA1-226ENST00000591534 RGL2O15211 777 aa14.11□□□□□ -0.15
BRCA1-226ENST00000591534 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-226ENST00000591534 XRN1Q8IZH2 1706 aaKnown RBP14.1□□□□□ -0.15
BRCA1-226ENST00000591534 AFF2P51816 1311 aa14.1□□□□□ -0.15
BRCA1-226ENST00000591534 NRXN3Q9Y4C0 1643 aa14.09□□□□□ -0.15
BRCA1-226ENST00000591534 C8orf37Q96NL8 207 aa14.09□□□□□ -0.15
BRCA1-226ENST00000591534 NEXMIFQ5QGS0 1516 aa14.09□□□□□ -0.15
BRCA1-226ENST00000591534 HFM1A2PYH4 1435 aa14.08□□□□□ -0.15
BRCA1-226ENST00000591534 PTCH1Q13635 1447 aa14.08□□□□□ -0.15
BRCA1-226ENST00000591534 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-226ENST00000591534 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
BRCA1-226ENST00000591534 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
BRCA1-226ENST00000591534 UPF1Q92900 1129 aaKnown RBP eCLIP14.08□□□□□ -0.16
BRCA1-226ENST00000591534 RBM6P78332 1123 aaKnown RBP14.07□□□□□ -0.16
BRCA1-226ENST00000591534 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
BRCA1-226ENST00000591534 QTRT2Q9H974 415 aaKnown RBP14.07□□□□□ -0.16
BRCA1-226ENST00000591534 ACIN1Q9UKV3 1341 aaKnown RBP14.07□□□□□ -0.16
BRCA1-226ENST00000591534 CLTCL1P53675 1640 aa14.07□□□□□ -0.16
BRCA1-226ENST00000591534 C1orf167Q5SNV9 1468 aa14.06□□□□□ -0.16
BRCA1-226ENST00000591534 PNPLA6Q8IY17 1366 aa14.06□□□□□ -0.16
BRCA1-226ENST00000591534 KIF1BO60333 1816 aa14.04□□□□□ -0.16
BRCA1-226ENST00000591534 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
BRCA1-226ENST00000591534 DDX17Q92841 729 aaKnown RBP14.04□□□□□ -0.16
BRCA1-226ENST00000591534 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
BRCA1-226ENST00000591534 ROBO2Q9HCK4 1378 aa14.04□□□□□ -0.16
BRCA1-226ENST00000591534 ADAMTS2O95450 1211 aa14.03□□□□□ -0.16
BRCA1-226ENST00000591534 SOS2Q07890 1332 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-226ENST00000591534 PRAG1Q86YV5 1406 aa14.03□□□□□ -0.16
BRCA1-226ENST00000591534 NHSL1Q5SYE7 1610 aa14.03□□□□□ -0.16
BRCA1-226ENST00000591534 LRPPRCP42704 1394 aaKnown RBP14.02□□□□□ -0.17
BRCA1-226ENST00000591534 NPHP3Q7Z494 1330 aa14.02□□□□□ -0.17
BRCA1-226ENST00000591534 ORAI2Q96SN7 254 aa14.02□□□□□ -0.17
BRCA1-226ENST00000591534 CCDC144AA2RUR9 1427 aa14.01□□□□□ -0.17
BRCA1-226ENST00000591534 ANKRD30BQ9BXX2 1392 aa14.01□□□□□ -0.17
BRCA1-226ENST00000591534 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
BRCA1-226ENST00000591534 TRPC5Q9UL62 973 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-226ENST00000591534 NUBP1P53384 320 aa14□□□□□ -0.17
BRCA1-226ENST00000591534 USP21Q9UK80 565 aa14□□□□□ -0.17
BRCA1-226ENST00000591534 SETD1AO15047 1707 aaKnown RBP14□□□□□ -0.17
BRCA1-226ENST00000591534 RGL3Q3MIN7 710 aa13.99□□□□□ -0.17
BRCA1-226ENST00000591534 NALCNQ8IZF0 1738 aa13.98□□□□□ -0.17
BRCA1-226ENST00000591534 HAP1P54257 671 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-226ENST00000591534 FNBP4Q8N3X1 1017 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-226ENST00000591534 MPHOSPH9Q99550 1183 aa13.97□□□□□ -0.17
BRCA1-226ENST00000591534 STK26Q9P289 416 aa13.97□□□□□ -0.17
BRCA1-226ENST00000591534 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.17
BRCA1-226ENST00000591534 ADGRF5Q8IZF2 1346 aa13.95□□□□□ -0.18
BRCA1-226ENST00000591534 LAMC1P11047 1609 aa13.95□□□□□ -0.18
BRCA1-226ENST00000591534 FOXO3O43524 673 aa13.95□□□□□ -0.18
BRCA1-226ENST00000591534 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-226ENST00000591534 DCAF8Q5TAQ9 597 aa13.95□□□□□ -0.18
BRCA1-226ENST00000591534 RGS12O14924 1447 aa13.95□□□□□ -0.18
BRCA1-226ENST00000591534 ABCC11Q96J66 1382 aa13.95□□□□□ -0.18
BRCA1-226ENST00000591534 SIRT1Q96EB6 747 aa13.94□□□□□ -0.18
BRCA1-226ENST00000591534 CDC42BPGQ6DT37 1551 aa13.93□□□□□ -0.18
BRCA1-226ENST00000591534 TECPR2O15040 1411 aa13.93□□□□□ -0.18
BRCA1-226ENST00000591534 WAPLQ7Z5K2 1190 aa13.93□□□□□ -0.18
BRCA1-226ENST00000591534 PSME1Q06323 249 aa13.92□□□□□ -0.18
BRCA1-226ENST00000591534 CCDC125Q86Z20 511 aa13.92□□□□□ -0.18
BRCA1-226ENST00000591534 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-226ENST00000591534 PPLO60437 1756 aa13.91□□□□□ -0.18
BRCA1-226ENST00000591534 SPATA31E1Q6ZUB1 1445 aa13.91□□□□□ -0.18
BRCA1-226ENST00000591534 TMEM132EQ6IEE7 984 aa13.91□□□□□ -0.18
BRCA1-226ENST00000591534 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
BRCA1-226ENST00000591534 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
BRCA1-226ENST00000591534 GSE1Q14687 1217 aa13.9□□□□□ -0.18
BRCA1-226ENST00000591534 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
BRCA1-226ENST00000591534 ATRNO75882 1429 aa13.9□□□□□ -0.19
BRCA1-226ENST00000591534 MYOM2P54296 1465 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms