RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 PIK3R4Q99570 1358 aa26.56■■□□□ 1.84
SPHK1-207ENST00000590959 WAPLQ7Z5K2 1190 aa26.55■■□□□ 1.84
SPHK1-207ENST00000590959 ROBO2Q9HCK4 1378 aa26.54■■□□□ 1.84
SPHK1-207ENST00000590959 DMRT2Q9Y5R5 561 aa26.53■■□□□ 1.84
SPHK1-207ENST00000590959 PLEKHH1Q9ULM0 1364 aa26.53■■□□□ 1.84
SPHK1-207ENST00000590959 SAFB2Q14151 953 aaKnown RBP eCLIP26.53■■□□□ 1.84
SPHK1-207ENST00000590959 STRCP1A6NGW2 1772 aa26.52■■□□□ 1.84
SPHK1-207ENST00000590959 XRN1Q8IZH2 1706 aaKnown RBP26.52■■□□□ 1.84
SPHK1-207ENST00000590959 TECPR2O15040 1411 aa26.52■■□□□ 1.84
SPHK1-207ENST00000590959 PRAM1Q96QH2 718 aa26.52■■□□□ 1.84
SPHK1-207ENST00000590959 PANK3Q9H999 370 aa26.52■■□□□ 1.84
SPHK1-207ENST00000590959 ZNF335Q9H4Z2 1342 aaPredicted RBP26.51■■□□□ 1.83
SPHK1-207ENST00000590959 RBM33Q96EV2 1170 aaKnown RBP26.51■■□□□ 1.83
SPHK1-207ENST00000590959 PER1O15534 1290 aaPredicted RBP26.5■■□□□ 1.83
SPHK1-207ENST00000590959 KNDC1Q76NI1 1749 aa26.5■■□□□ 1.83
SPHK1-207ENST00000590959 CPS1P31327 1500 aa26.48■■□□□ 1.83
SPHK1-207ENST00000590959 DLC1Q96QB1 1528 aa26.48■■□□□ 1.83
SPHK1-207ENST00000590959 POGKQ9P215 609 aa26.47■■□□□ 1.83
SPHK1-207ENST00000590959 KTN1Q86UP2 1357 aaKnown RBP26.47■■□□□ 1.83
SPHK1-207ENST00000590959 EVC2Q86UK5 1308 aa26.47■■□□□ 1.83
SPHK1-207ENST00000590959 NWD1Q149M9 1564 aa26.47■■□□□ 1.83
SPHK1-207ENST00000590959 PUS7Q96PZ0 661 aaKnown RBP26.45■■□□□ 1.83
SPHK1-207ENST00000590959 MYOM1P52179 1685 aa26.44■■□□□ 1.82
SPHK1-207ENST00000590959 PTCH1Q13635 1447 aa26.44■■□□□ 1.82
SPHK1-207ENST00000590959 SIRT1Q96EB6 747 aa26.44■■□□□ 1.82
SPHK1-207ENST00000590959 FAM135BQ49AJ0 1406 aa26.44■■□□□ 1.82
SPHK1-207ENST00000590959 CNGB1Q14028 1251 aaPredicted RBP26.43■■□□□ 1.82
SPHK1-207ENST00000590959 RALBP1Q15311 655 aa26.42■■□□□ 1.82
SPHK1-207ENST00000590959 MINK1Q8N4C8 1332 aaPredicted RBP26.41■■□□□ 1.82
SPHK1-207ENST00000590959 TULP4Q9NRJ4 1543 aa26.41■■□□□ 1.82
SPHK1-207ENST00000590959 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.39■■□□□ 1.82
SPHK1-207ENST00000590959 PROSER2Q86WR7 435 aaPredicted RBP26.39■■□□□ 1.82
SPHK1-207ENST00000590959 KNSTRNQ9Y448 316 aa26.39■■□□□ 1.82
SPHK1-207ENST00000590959 MRS2Q9HD23 443 aa26.37■■□□□ 1.81
SPHK1-207ENST00000590959 NKTRP30414 1462 aaKnown RBP26.37■■□□□ 1.81
SPHK1-207ENST00000590959 PARD3Q8TEW0 1356 aa26.36■■□□□ 1.81
SPHK1-207ENST00000590959 CCDC184Q52MB2 194 aa26.35■■□□□ 1.81
SPHK1-207ENST00000590959 MYBBP1AQ9BQG0 1328 aaKnown RBP26.34■■□□□ 1.81
SPHK1-207ENST00000590959 TMEM94Q12767 1356 aa26.34■■□□□ 1.81
SPHK1-207ENST00000590959 TMC1Q8TDI8 760 aa26.34■■□□□ 1.81
SPHK1-207ENST00000590959 SRPK2P78362 688 aaKnown RBP26.33■■□□□ 1.81
SPHK1-207ENST00000590959 CC2D1BQ5T0F9 858 aaKnown RBP26.33■■□□□ 1.81
SPHK1-207ENST00000590959 CABP2Q9NPB3 220 aa26.33■■□□□ 1.81
SPHK1-207ENST00000590959 LRRC7Q96NW7 1537 aa26.32■■□□□ 1.8
SPHK1-207ENST00000590959 ATAD2Q6PL18 1390 aa26.31■■□□□ 1.8
SPHK1-207ENST00000590959 XIRP1Q702N8 1843 aaKnown RBP26.3■■□□□ 1.8
SPHK1-207ENST00000590959 LTBP4Q8N2S1 1624 aa26.3■■□□□ 1.8
SPHK1-207ENST00000590959 AMER1Q5JTC6 1135 aaPredicted RBP26.3■■□□□ 1.8
SPHK1-207ENST00000590959 SLC12A5Q9H2X9 1139 aa26.3■■□□□ 1.8
SPHK1-207ENST00000590959 NALCNQ8IZF0 1738 aa26.3■■□□□ 1.8
SPHK1-207ENST00000590959 NPC1L1Q9UHC9 1359 aa26.29■■□□□ 1.8
SPHK1-207ENST00000590959 NINLQ9Y2I6 1382 aa26.29■■□□□ 1.8
SPHK1-207ENST00000590959 C14orf37Q86TY3 774 aa26.28■■□□□ 1.8
SPHK1-207ENST00000590959 CDK19Q9BWU1 502 aa26.28■■□□□ 1.8
SPHK1-207ENST00000590959 CARD14Q9BXL6 1004 aa26.27■■□□□ 1.8
SPHK1-207ENST00000590959 BRD4O60885 1362 aaPredicted RBP26.26■■□□□ 1.79
SPHK1-207ENST00000590959 WASLO00401 505 aaPredicted RBP26.25■■□□□ 1.79
SPHK1-207ENST00000590959 NLRP13Q86W25 1043 aa26.25■■□□□ 1.79
SPHK1-207ENST00000590959 ADGRL3Q9HAR2 1447 aa26.25■■□□□ 1.79
SPHK1-207ENST00000590959 NUTM2FA1L443 756 aa26.25■■□□□ 1.79
SPHK1-207ENST00000590959 ANKRD36BQ8N2N9 1353 aa26.24■■□□□ 1.79
SPHK1-207ENST00000590959 ADGRB2O60241 1585 aa26.24■■□□□ 1.79
SPHK1-207ENST00000590959 NEFLP07196 543 aa26.21■■□□□ 1.79
SPHK1-207ENST00000590959 FAM9BQ8IZU0 186 aa26.21■■□□□ 1.79
SPHK1-207ENST00000590959 C19orf44Q9H6X5 657 aa26.21■■□□□ 1.79
SPHK1-207ENST00000590959 NSD3Q9BZ95 1437 aa26.2■■□□□ 1.79
SPHK1-207ENST00000590959 NCOA3Q9Y6Q9 1424 aa26.2■■□□□ 1.79
SPHK1-207ENST00000590959 PRR36Q9H6K5 1346 aa26.19■■□□□ 1.78
SPHK1-207ENST00000590959 TSHZ2Q9NRE2 1034 aa26.17■■□□□ 1.78
SPHK1-207ENST00000590959 TERF2IPQ9NYB0 399 aa26.17■■□□□ 1.78
SPHK1-207ENST00000590959 CDC42BPGQ6DT37 1551 aa26.16■■□□□ 1.78
SPHK1-207ENST00000590959 MSH6P52701 1360 aa26.15■■□□□ 1.78
SPHK1-207ENST00000590959 PNISRQ8TF01 805 aaKnown RBP26.15■■□□□ 1.78
SPHK1-207ENST00000590959 USP32Q8NFA0 1604 aa26.14■■□□□ 1.78
SPHK1-207ENST00000590959 A0A1W2PP64 1363 aa26.14■■□□□ 1.78
SPHK1-207ENST00000590959 RGPD8O14715 1765 aaPredicted RBP26.14■■□□□ 1.78
SPHK1-207ENST00000590959 CGNL1Q0VF96 1302 aa26.14■■□□□ 1.78
SPHK1-207ENST00000590959 NUDT16Q96DE0 195 aaKnown RBP26.14■■□□□ 1.78
SPHK1-207ENST00000590959 FMN2Q9NZ56 1722 aa26.14■■□□□ 1.77
SPHK1-207ENST00000590959 ATP7BP35670 1465 aa26.13■■□□□ 1.77
SPHK1-207ENST00000590959 CABP1Q9NZU7 370 aa26.13■■□□□ 1.77
SPHK1-207ENST00000590959 PPP2R1AP30153 589 aa26.12■■□□□ 1.77
SPHK1-207ENST00000590959 HNRNPUQ00839 825 aaKnown RBP eCLIP26.12■■□□□ 1.77
SPHK1-207ENST00000590959 HDGFL2Q7Z4V5 671 aaPredicted RBP26.12■■□□□ 1.77
SPHK1-207ENST00000590959 ATF3P18847 181 aa26.11■■□□□ 1.77
SPHK1-207ENST00000590959 CD163L1Q9NR16 1453 aa26.1■■□□□ 1.77
SPHK1-207ENST00000590959 NSD2O96028 1365 aa26.09■■□□□ 1.77
SPHK1-207ENST00000590959 DCCP43146 1447 aa26.09■■□□□ 1.77
SPHK1-207ENST00000590959 CADPS2Q86UW7 1296 aa26.08■■□□□ 1.77
SPHK1-207ENST00000590959 CCDC61Q9Y6R9 512 aa26.08■■□□□ 1.77
SPHK1-207ENST00000590959 FKBP8Q14318 412 aa26.07■■□□□ 1.76
SPHK1-207ENST00000590959 MST1RQ04912 1400 aa26.07■■□□□ 1.76
SPHK1-207ENST00000590959 PPIP5K1Q6PFW1 1433 aa26.06■■□□□ 1.76
SPHK1-207ENST00000590959 ORAI2Q96SN7 254 aa26.06■■□□□ 1.76
SPHK1-207ENST00000590959 C1orf167Q5SNV9 1468 aa26.05■■□□□ 1.76
SPHK1-207ENST00000590959 MORC1Q86VD1 984 aa26.05■■□□□ 1.76
SPHK1-207ENST00000590959 PMFBP1Q8TBY8 1022 aa26.04■■□□□ 1.76
SPHK1-207ENST00000590959 ANKARQ7Z5J8 1434 aa26.04■■□□□ 1.76
SPHK1-207ENST00000590959 TOPAZ1Q8N9V7 1692 aa26.03■■□□□ 1.76
SPHK1-207ENST00000590959 ESCO1Q5FWF5 840 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms