RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 PSDA5PKW4 1024 aaPredicted RBP20.96■□□□□ 0.95
LSM12-203ENST00000590563 PXDNQ92626 1479 aa20.95■□□□□ 0.94
LSM12-203ENST00000590563 SLIT2O94813 1529 aa20.95■□□□□ 0.94
LSM12-203ENST00000590563 ROBO2Q9HCK4 1378 aa20.9■□□□□ 0.94
LSM12-203ENST00000590563 SF3B2Q13435 895 aaKnown RBP20.89■□□□□ 0.93
LSM12-203ENST00000590563 UNC5CLQ8IV45 518 aa20.89■□□□□ 0.93
LSM12-203ENST00000590563 NEXMIFQ5QGS0 1516 aa20.88■□□□□ 0.93
LSM12-203ENST00000590563 PRAG1Q86YV5 1406 aa20.88■□□□□ 0.93
LSM12-203ENST00000590563 SEPT12Q8IYM1 358 aa20.87■□□□□ 0.93
LSM12-203ENST00000590563 NPHP3Q7Z494 1330 aa20.84■□□□□ 0.93
LSM12-203ENST00000590563 USP32Q8NFA0 1604 aa20.84■□□□□ 0.93
LSM12-203ENST00000590563 CDC42BPGQ6DT37 1551 aa20.82■□□□□ 0.92
LSM12-203ENST00000590563 XPCQ01831 940 aaPredicted RBP20.82■□□□□ 0.92
LSM12-203ENST00000590563 YY1P25490 414 aa20.81■□□□□ 0.92
LSM12-203ENST00000590563 ONECUT3O60422 494 aaPredicted RBP20.8■□□□□ 0.92
LSM12-203ENST00000590563 BAG6P46379 1132 aa20.79■□□□□ 0.92
LSM12-203ENST00000590563 KRT27Q7Z3Y8 459 aa20.79■□□□□ 0.92
LSM12-203ENST00000590563 PLCH1Q4KWH8 1693 aa20.78■□□□□ 0.92
LSM12-203ENST00000590563 VPS72Q15906 364 aa20.78■□□□□ 0.92
LSM12-203ENST00000590563 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
LSM12-203ENST00000590563 R3HDM1Q15032 1099 aaKnown RBP20.77■□□□□ 0.92
LSM12-203ENST00000590563 ESCO1Q5FWF5 840 aa20.77■□□□□ 0.92
LSM12-203ENST00000590563 HFM1A2PYH4 1435 aa20.77■□□□□ 0.91
LSM12-203ENST00000590563 CLTCL1P53675 1640 aa20.76■□□□□ 0.91
LSM12-203ENST00000590563 FOXO3O43524 673 aa20.76■□□□□ 0.91
LSM12-203ENST00000590563 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
LSM12-203ENST00000590563 NUP155O75694 1391 aa20.74■□□□□ 0.91
LSM12-203ENST00000590563 DISP2A7MBM2 1401 aa20.74■□□□□ 0.91
LSM12-203ENST00000590563 RGPD1P0DJD0 1748 aa20.74■□□□□ 0.91
LSM12-203ENST00000590563 EN1Q05925 392 aaPredicted RBP20.74■□□□□ 0.91
LSM12-203ENST00000590563 SPATA31A3Q5VYP0 1347 aa20.73■□□□□ 0.91
LSM12-203ENST00000590563 TNS1Q9HBL0 1735 aaKnown RBP20.73■□□□□ 0.91
LSM12-203ENST00000590563 FAM50AQ14320 339 aaKnown RBP20.72■□□□□ 0.91
LSM12-203ENST00000590563 ABCA3Q99758 1704 aa20.7■□□□□ 0.9
LSM12-203ENST00000590563 LRPPRCP42704 1394 aaKnown RBP20.7■□□□□ 0.9
LSM12-203ENST00000590563 ROCK1Q13464 1354 aa20.69■□□□□ 0.9
LSM12-203ENST00000590563 NRAPQ86VF7 1730 aa20.68■□□□□ 0.9
LSM12-203ENST00000590563 NAIPQ13075 1403 aa20.68■□□□□ 0.9
LSM12-203ENST00000590563 KIF1AQ12756 1690 aa20.65■□□□□ 0.9
LSM12-203ENST00000590563 CCDC144AA2RUR9 1427 aa20.65■□□□□ 0.9
LSM12-203ENST00000590563 CCDC9Q9Y3X0 531 aaKnown RBP20.65■□□□□ 0.9
LSM12-203ENST00000590563 TNS3Q68CZ2 1445 aa20.64■□□□□ 0.89
LSM12-203ENST00000590563 NUTM2FA1L443 756 aa20.63■□□□□ 0.89
LSM12-203ENST00000590563 EZH2Q15910 746 aaKnown RBP20.63■□□□□ 0.89
LSM12-203ENST00000590563 FAM182BQ5T319 152 aa20.63■□□□□ 0.89
LSM12-203ENST00000590563 CABLES1Q8TDN4 633 aa20.63■□□□□ 0.89
LSM12-203ENST00000590563 FMN2Q9NZ56 1722 aa20.62■□□□□ 0.89
LSM12-203ENST00000590563 FAM98CQ17RN3 349 aaKnown RBP20.62■□□□□ 0.89
LSM12-203ENST00000590563 THSD7AQ9UPZ6 1657 aa20.61■□□□□ 0.89
LSM12-203ENST00000590563 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
LSM12-203ENST00000590563 APLP2Q06481 763 aa20.61■□□□□ 0.89
LSM12-203ENST00000590563 KIF1BO60333 1816 aa20.6■□□□□ 0.89
LSM12-203ENST00000590563 ADGRB2O60241 1585 aa20.6■□□□□ 0.89
LSM12-203ENST00000590563 CAMKK2Q96RR4 588 aa20.6■□□□□ 0.89
LSM12-203ENST00000590563 RREB1Q92766 1687 aa20.59■□□□□ 0.89
LSM12-203ENST00000590563 A0A0G2JS52 829 aa20.59■□□□□ 0.89
LSM12-203ENST00000590563 MYT1Q01538 1121 aa20.59■□□□□ 0.89
LSM12-203ENST00000590563 TECPR2O15040 1411 aa20.59■□□□□ 0.89
LSM12-203ENST00000590563 FAM83GA6ND36 823 aa20.58■□□□□ 0.89
LSM12-203ENST00000590563 VGFO15240 615 aaPredicted RBP20.58■□□□□ 0.89
LSM12-203ENST00000590563 KRT28Q7Z3Y7 464 aa20.58■□□□□ 0.89
LSM12-203ENST00000590563 IFFO2Q5TF58 517 aa20.57■□□□□ 0.88
LSM12-203ENST00000590563 HAP1P54257 671 aaPredicted RBP20.56■□□□□ 0.88
LSM12-203ENST00000590563 PPLO60437 1756 aa20.56■□□□□ 0.88
LSM12-203ENST00000590563 PLEKHH1Q9ULM0 1364 aa20.56■□□□□ 0.88
LSM12-203ENST00000590563 NUP188Q5SRE5 1749 aa20.56■□□□□ 0.88
LSM12-203ENST00000590563 CAMTA1Q9Y6Y1 1673 aa20.55■□□□□ 0.88
LSM12-203ENST00000590563 WAPLQ7Z5K2 1190 aa20.54■□□□□ 0.88
LSM12-203ENST00000590563 PLEKHG5O94827 1062 aa20.53■□□□□ 0.88
LSM12-203ENST00000590563 SBNO1A3KN83 1393 aa20.53■□□□□ 0.88
LSM12-203ENST00000590563 NINLQ9Y2I6 1382 aa20.53■□□□□ 0.88
LSM12-203ENST00000590563 PARD3Q8TEW0 1356 aa20.52■□□□□ 0.88
LSM12-203ENST00000590563 KNDC1Q76NI1 1749 aa20.52■□□□□ 0.88
LSM12-203ENST00000590563 NRXN1Q9ULB1 1477 aa20.5■□□□□ 0.87
LSM12-203ENST00000590563 COL14A1Q05707 1796 aaKnown RBP20.5■□□□□ 0.87
LSM12-203ENST00000590563 SPATA31A5Q5VU36 1347 aa20.5■□□□□ 0.87
LSM12-203ENST00000590563 SPATA31A7Q8IWB4 1347 aa20.5■□□□□ 0.87
LSM12-203ENST00000590563 ARHGEF10O15013 1369 aa20.49■□□□□ 0.87
LSM12-203ENST00000590563 BTG4Q9NY30 223 aa20.49■□□□□ 0.87
LSM12-203ENST00000590563 RPGRIP1LQ68CZ1 1315 aa20.49■□□□□ 0.87
LSM12-203ENST00000590563 IFT172Q9UG01 1749 aa20.48■□□□□ 0.87
LSM12-203ENST00000590563 TRIM37O94972 964 aa20.48■□□□□ 0.87
LSM12-203ENST00000590563 ZNF784Q8NCA9 323 aaPredicted RBP20.48■□□□□ 0.87
LSM12-203ENST00000590563 RGPD8O14715 1765 aaPredicted RBP20.48■□□□□ 0.87
LSM12-203ENST00000590563 SENP3-EIF4A1A0A087X0R7 540 aa20.46■□□□□ 0.87
LSM12-203ENST00000590563 PHF8Q9UPP1 1060 aa20.46■□□□□ 0.87
LSM12-203ENST00000590563 ABCC11Q96J66 1382 aa20.46■□□□□ 0.87
LSM12-203ENST00000590563 RRBP1Q9P2E9 1410 aaKnown RBP20.45■□□□□ 0.86
LSM12-203ENST00000590563 TRPM3Q9HCF6 1732 aaPredicted RBP20.45■□□□□ 0.86
LSM12-203ENST00000590563 PSME1Q06323 249 aa20.45■□□□□ 0.86
LSM12-203ENST00000590563 STK26Q9P289 416 aa20.45■□□□□ 0.86
LSM12-203ENST00000590563 APBA3O96018 575 aa20.44■□□□□ 0.86
LSM12-203ENST00000590563 SPON1Q9HCB6 807 aa20.44■□□□□ 0.86
LSM12-203ENST00000590563 CRYBG1Q9Y4K1 1723 aa20.44■□□□□ 0.86
LSM12-203ENST00000590563 KCNQ2O43526 872 aa20.43■□□□□ 0.86
LSM12-203ENST00000590563 PPP1R1BQ9UD71 204 aaPredicted RBP20.43■□□□□ 0.86
LSM12-203ENST00000590563 ADGRF5Q8IZF2 1346 aa20.43■□□□□ 0.86
LSM12-203ENST00000590563 ALS2Q96Q42 1657 aa20.42■□□□□ 0.86
LSM12-203ENST00000590563 LMOD2Q6P5Q4 547 aa20.42■□□□□ 0.86
LSM12-203ENST00000590563 FAM196AQ6ZSG2 479 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms