RNA–Protein interactions for RNA: ENST00000590526.5

RTN2-208, Transcript of reticulon 2, human

TSL 5 BASIC

Gene RTN2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN2-208	ENST00000590526	RIMS2	Q9UQ26	1411 aa		32.85	■■■□□ 2.85
RTN2-208	ENST00000590526	WDR43	Q15061	677 aa	Known RBP eCLIP	32.85	■■■□□ 2.85
RTN2-208	ENST00000590526	SRPK2	P78362	688 aa	Known RBP	32.84	■■■□□ 2.85
RTN2-208	ENST00000590526	TSHZ2	Q9NRE2	1034 aa		32.84	■■■□□ 2.85
RTN2-208	ENST00000590526	POGK	Q9P215	609 aa		32.84	■■■□□ 2.85
RTN2-208	ENST00000590526	CEBPA	P49715	358 aa	Predicted RBP	32.83	■■■□□ 2.85
RTN2-208	ENST00000590526	WAPL	Q7Z5K2	1190 aa		32.82	■■■□□ 2.84
RTN2-208	ENST00000590526	B4GALNT3	Q6L9W6	998 aa		32.8	■■■□□ 2.84
RTN2-208	ENST00000590526	TRH	P20396	242 aa	Predicted RBP	32.78	■■■□□ 2.84
RTN2-208	ENST00000590526	MORC1	Q86VD1	984 aa		32.77	■■■□□ 2.84
RTN2-208	ENST00000590526	PLEKHH1	Q9ULM0	1364 aa		32.77	■■■□□ 2.84
RTN2-208	ENST00000590526	SETD1A	O15047	1707 aa	Known RBP	32.76	■■■□□ 2.83
RTN2-208	ENST00000590526	NRXN3	Q9Y4C0	1643 aa		32.72	■■■□□ 2.83
RTN2-208	ENST00000590526	PPP4R2	Q9NY27	417 aa		32.72	■■■□□ 2.83
RTN2-208	ENST00000590526	TNR	Q92752	1358 aa		32.71	■■■□□ 2.83
RTN2-208	ENST00000590526		A0A1W2PP64	1363 aa		32.7	■■■□□ 2.83
RTN2-208	ENST00000590526	RNF123	Q5XPI4	1314 aa		32.7	■■■□□ 2.83
RTN2-208	ENST00000590526	MET	P08581	1390 aa		32.69	■■■□□ 2.82
RTN2-208	ENST00000590526	CDK19	Q9BWU1	502 aa		32.69	■■■□□ 2.82
RTN2-208	ENST00000590526	ANKRD36B	Q8N2N9	1353 aa		32.69	■■■□□ 2.82
RTN2-208	ENST00000590526	CGNL1	Q0VF96	1302 aa		32.66	■■■□□ 2.82
RTN2-208	ENST00000590526	RCAN3	Q9UKA8	241 aa		32.66	■■■□□ 2.82
RTN2-208	ENST00000590526	APAF1	O14727	1248 aa		32.65	■■■□□ 2.82
RTN2-208	ENST00000590526	TXNDC2	Q86VQ3	553 aa		32.65	■■■□□ 2.82
RTN2-208	ENST00000590526	UBR1	Q8IWV7	1749 aa		32.64	■■■□□ 2.82
RTN2-208	ENST00000590526	GGNBP2	Q9H3C7	697 aa		32.64	■■■□□ 2.82
RTN2-208	ENST00000590526	MTHFS	P49914	203 aa		32.62	■■■□□ 2.81
RTN2-208	ENST00000590526	INSR	P06213	1382 aa		32.62	■■■□□ 2.81
RTN2-208	ENST00000590526	PDE3B	Q13370	1112 aa		32.62	■■■□□ 2.81
RTN2-208	ENST00000590526	SHPRH	Q149N8	1683 aa		32.61	■■■□□ 2.81
RTN2-208	ENST00000590526	CABP1	Q9NZU7	370 aa		32.61	■■■□□ 2.81
RTN2-208	ENST00000590526	USP32	Q8NFA0	1604 aa		32.61	■■■□□ 2.81
RTN2-208	ENST00000590526	CD163L1	Q9NR16	1453 aa		32.6	■■■□□ 2.81
RTN2-208	ENST00000590526	PLIN1	O60240	522 aa		32.6	■■■□□ 2.81
RTN2-208	ENST00000590526	PUS7	Q96PZ0	661 aa	Known RBP	32.59	■■■□□ 2.81
RTN2-208	ENST00000590526	RRP1	P56182	461 aa	Known RBP	32.58	■■■□□ 2.81
RTN2-208	ENST00000590526	ERICH6B	Q5W0A0	696 aa		32.58	■■■□□ 2.81
RTN2-208	ENST00000590526	NCKAP5L	Q9HCH0	1330 aa		32.56	■■■□□ 2.8
RTN2-208	ENST00000590526	LTK	P29376	864 aa		32.56	■■■□□ 2.8
RTN2-208	ENST00000590526	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.56	■■■□□ 2.8
RTN2-208	ENST00000590526	DMRT2	Q9Y5R5	561 aa		32.55	■■■□□ 2.8
RTN2-208	ENST00000590526	POLR3A	O14802	1390 aa	Predicted RBP	32.55	■■■□□ 2.8
RTN2-208	ENST00000590526	C3	P01024	1663 aa		32.54	■■■□□ 2.8
RTN2-208	ENST00000590526	TMEM2	Q9UHN6	1383 aa		32.54	■■■□□ 2.8
RTN2-208	ENST00000590526	ZNF521	Q96K83	1311 aa		32.53	■■■□□ 2.8
RTN2-208	ENST00000590526	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
RTN2-208	ENST00000590526	ATAD2	Q6PL18	1390 aa		32.53	■■■□□ 2.8
RTN2-208	ENST00000590526	FBLN1	P23142	703 aa		32.52	■■■□□ 2.8
RTN2-208	ENST00000590526	RRP7A	Q9Y3A4	280 aa	Known RBP	32.52	■■■□□ 2.8
RTN2-208	ENST00000590526	ABCC11	Q96J66	1382 aa		32.51	■■■□□ 2.8
RTN2-208	ENST00000590526	NEUROD2	Q15784	382 aa		32.51	■■■□□ 2.8
RTN2-208	ENST00000590526	FYB1	O15117	783 aa		32.51	■■■□□ 2.79
RTN2-208	ENST00000590526	FER1L4	A9Z1Z3	1794 aa		32.5	■■■□□ 2.79
RTN2-208	ENST00000590526	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.5	■■■□□ 2.79
RTN2-208	ENST00000590526	EXOC6	Q8TAG9	804 aa		32.5	■■■□□ 2.79
RTN2-208	ENST00000590526	DUSP27	Q5VZP5	1158 aa		32.49	■■■□□ 2.79
RTN2-208	ENST00000590526	DLC1	Q96QB1	1528 aa		32.49	■■■□□ 2.79
RTN2-208	ENST00000590526	SLC26A8	Q96RN1	970 aa		32.48	■■■□□ 2.79
RTN2-208	ENST00000590526	TERF2IP	Q9NYB0	399 aa		32.48	■■■□□ 2.79
RTN2-208	ENST00000590526	GOLGA2	Q08379	1002 aa		32.47	■■■□□ 2.79
RTN2-208	ENST00000590526	ADAMTS13	Q76LX8	1427 aa		32.43	■■■□□ 2.78
RTN2-208	ENST00000590526	NINL	Q9Y2I6	1382 aa		32.43	■■■□□ 2.78
RTN2-208	ENST00000590526	NUTM2F	A1L443	756 aa		32.43	■■■□□ 2.78
RTN2-208	ENST00000590526	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.43	■■■□□ 2.78
RTN2-208	ENST00000590526	CCDC136	Q96JN2	1154 aa		32.43	■■■□□ 2.78
RTN2-208	ENST00000590526	NLRP1	Q9C000	1473 aa		32.42	■■■□□ 2.78
RTN2-208	ENST00000590526	WASL	O00401	505 aa	Predicted RBP	32.41	■■■□□ 2.78
RTN2-208	ENST00000590526	PRKCSH	P14314	528 aa	Predicted RBP	32.41	■■■□□ 2.78
RTN2-208	ENST00000590526	SLFN5	Q08AF3	891 aa		32.41	■■■□□ 2.78
RTN2-208	ENST00000590526	ROBO2	Q9HCK4	1378 aa		32.41	■■■□□ 2.78
RTN2-208	ENST00000590526	NSD2	O96028	1365 aa		32.4	■■■□□ 2.78
RTN2-208	ENST00000590526	KIF20B	Q96Q89	1820 aa		32.4	■■■□□ 2.78
RTN2-208	ENST00000590526	C20orf194	Q5TEA3	1177 aa		32.39	■■■□□ 2.78
RTN2-208	ENST00000590526	ANKRD26	Q9UPS8	1709 aa		32.39	■■■□□ 2.78
RTN2-208	ENST00000590526	HDGF	P51858	240 aa	Known RBP	32.39	■■■□□ 2.78
RTN2-208	ENST00000590526	ZRANB1	Q9UGI0	708 aa		32.39	■■■□□ 2.78
RTN2-208	ENST00000590526	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.37	■■■□□ 2.77
RTN2-208	ENST00000590526	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.37	■■■□□ 2.77
RTN2-208	ENST00000590526	CFAP53	Q96M91	514 aa		32.37	■■■□□ 2.77
RTN2-208	ENST00000590526	KNDC1	Q76NI1	1749 aa		32.36	■■■□□ 2.77
RTN2-208	ENST00000590526	TCP11L2	Q8N4U5	519 aa		32.36	■■■□□ 2.77
RTN2-208	ENST00000590526	PPIP5K1	Q6PFW1	1433 aa		32.36	■■■□□ 2.77
RTN2-208	ENST00000590526	NUDT16	Q96DE0	195 aa	Known RBP	32.34	■■■□□ 2.77
RTN2-208	ENST00000590526	RBM19	Q9Y4C8	960 aa	Known RBP	32.34	■■■□□ 2.77
RTN2-208	ENST00000590526	U2SURP	O15042	1029 aa	Known RBP	32.33	■■■□□ 2.77
RTN2-208	ENST00000590526	WWC1	Q8IX03	1113 aa		32.33	■■■□□ 2.77
RTN2-208	ENST00000590526	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.32	■■■□□ 2.76
RTN2-208	ENST00000590526	PRR36	Q9H6K5	1346 aa		32.32	■■■□□ 2.76
RTN2-208	ENST00000590526	PPM1G	O15355	546 aa	Predicted RBP	32.32	■■■□□ 2.76
RTN2-208	ENST00000590526	RUNDC1	Q96C34	613 aa		32.32	■■■□□ 2.76
RTN2-208	ENST00000590526	PTPRU	Q92729	1446 aa		32.31	■■■□□ 2.76
RTN2-208	ENST00000590526	CPS1	P31327	1500 aa		32.31	■■■□□ 2.76
RTN2-208	ENST00000590526	NME9	Q86XW9	330 aa		32.31	■■■□□ 2.76
RTN2-208	ENST00000590526	CRBN	Q96SW2	442 aa		32.31	■■■□□ 2.76
RTN2-208	ENST00000590526	TRMT2A	Q8IZ69	625 aa	Known RBP	32.3	■■■□□ 2.76
RTN2-208	ENST00000590526	PLEKHG1	Q9ULL1	1385 aa		32.29	■■■□□ 2.76
RTN2-208	ENST00000590526	MAP2	P11137	1827 aa	Known RBP	32.29	■■■□□ 2.76
RTN2-208	ENST00000590526	TECPR2	O15040	1411 aa		32.28	■■■□□ 2.76
RTN2-208	ENST00000590526	IQSEC2	Q5JU85	1478 aa		32.27	■■■□□ 2.76
RTN2-208	ENST00000590526	COL3A1	P02461	1466 aa	Predicted RBP	32.26	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms