RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 LMTK3Q96Q04 1460 aa24.04■■□□□ 1.44
CXXC1-212ENST00000589940 ANP32CO43423 234 aa24.04■■□□□ 1.44
CXXC1-212ENST00000589940 PUS7Q96PZ0 661 aaKnown RBP24.04■■□□□ 1.44
CXXC1-212ENST00000589940 PTCH1Q13635 1447 aa24.03■■□□□ 1.44
CXXC1-212ENST00000589940 XRN1Q8IZH2 1706 aaKnown RBP24.02■■□□□ 1.43
CXXC1-212ENST00000589940 MYOM1P52179 1685 aa24.01■■□□□ 1.43
CXXC1-212ENST00000589940 HSPA2P54652 639 aa23.99■■□□□ 1.43
CXXC1-212ENST00000589940 PANK3Q9H999 370 aa23.99■■□□□ 1.43
CXXC1-212ENST00000589940 CABP2Q9NPB3 220 aa23.96■■□□□ 1.43
CXXC1-212ENST00000589940 SRPK2P78362 688 aaKnown RBP23.96■■□□□ 1.43
CXXC1-212ENST00000589940 CHD2O14647 1828 aaKnown RBP23.96■■□□□ 1.43
CXXC1-212ENST00000589940 KCNA6P17658 529 aa23.95■■□□□ 1.42
CXXC1-212ENST00000589940 CDK19Q9BWU1 502 aa23.95■■□□□ 1.42
CXXC1-212ENST00000589940 PER1O15534 1290 aaPredicted RBP23.94■■□□□ 1.42
CXXC1-212ENST00000589940 ATAD2Q6PL18 1390 aa23.94■■□□□ 1.42
CXXC1-212ENST00000589940 ADGRB2O60241 1585 aa23.92■■□□□ 1.42
CXXC1-212ENST00000589940 WASLO00401 505 aaPredicted RBP23.92■■□□□ 1.42
CXXC1-212ENST00000589940 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.91■■□□□ 1.42
CXXC1-212ENST00000589940 PRKRIP1Q9H875 184 aaPredicted RBP23.91■■□□□ 1.42
CXXC1-212ENST00000589940 NINLQ9Y2I6 1382 aa23.91■■□□□ 1.42
CXXC1-212ENST00000589940 TMC1Q8TDI8 760 aa23.91■■□□□ 1.42
CXXC1-212ENST00000589940 SLC12A5Q9H2X9 1139 aa23.9■■□□□ 1.42
CXXC1-212ENST00000589940 NWD1Q149M9 1564 aa23.88■■□□□ 1.41
CXXC1-212ENST00000589940 CCER2I3L3R5 266 aa23.86■■□□□ 1.41
CXXC1-212ENST00000589940 KNSTRNQ9Y448 316 aa23.86■■□□□ 1.41
CXXC1-212ENST00000589940 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
CXXC1-212ENST00000589940 KTN1Q86UP2 1357 aaKnown RBP23.84■■□□□ 1.41
CXXC1-212ENST00000589940 ANKRD36BQ8N2N9 1353 aa23.84■■□□□ 1.41
CXXC1-212ENST00000589940 CARD14Q9BXL6 1004 aa23.83■■□□□ 1.4
CXXC1-212ENST00000589940 CNGB1Q14028 1251 aaPredicted RBP23.81■■□□□ 1.4
CXXC1-212ENST00000589940 NKTRP30414 1462 aaKnown RBP23.81■■□□□ 1.4
CXXC1-212ENST00000589940 AMER1Q5JTC6 1135 aaPredicted RBP23.8■■□□□ 1.4
CXXC1-212ENST00000589940 NUDT16Q96DE0 195 aaKnown RBP23.8■■□□□ 1.4
CXXC1-212ENST00000589940 ATP7BP35670 1465 aa23.8■■□□□ 1.4
CXXC1-212ENST00000589940 RALBP1Q15311 655 aa23.8■■□□□ 1.4
CXXC1-212ENST00000589940 CABP1Q9NZU7 370 aa23.8■■□□□ 1.4
CXXC1-212ENST00000589940 NPC1L1Q9UHC9 1359 aa23.79■■□□□ 1.4
CXXC1-212ENST00000589940 TERF2IPQ9NYB0 399 aa23.79■■□□□ 1.4
CXXC1-212ENST00000589940 NSD3Q9BZ95 1437 aa23.78■■□□□ 1.4
CXXC1-212ENST00000589940 A0A1W2PP64 1363 aa23.78■■□□□ 1.4
CXXC1-212ENST00000589940 PARD3Q8TEW0 1356 aa23.78■■□□□ 1.4
CXXC1-212ENST00000589940 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
CXXC1-212ENST00000589940 PRR36Q9H6K5 1346 aa23.78■■□□□ 1.4
CXXC1-212ENST00000589940 CD163L1Q9NR16 1453 aa23.78■■□□□ 1.4
CXXC1-212ENST00000589940 PPIP5K1Q6PFW1 1433 aa23.77■■□□□ 1.4
CXXC1-212ENST00000589940 CC2D1BQ5T0F9 858 aaKnown RBP23.77■■□□□ 1.4
CXXC1-212ENST00000589940 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
CXXC1-212ENST00000589940 NALCNQ8IZF0 1738 aa23.76■■□□□ 1.39
CXXC1-212ENST00000589940 CDC42BPGQ6DT37 1551 aa23.75■■□□□ 1.39
CXXC1-212ENST00000589940 HDGFL2Q7Z4V5 671 aaPredicted RBP23.75■■□□□ 1.39
CXXC1-212ENST00000589940 USP32Q8NFA0 1604 aa23.74■■□□□ 1.39
CXXC1-212ENST00000589940 PROSER2Q86WR7 435 aaPredicted RBP23.74■■□□□ 1.39
CXXC1-212ENST00000589940 RBM33Q96EV2 1170 aaKnown RBP23.74■■□□□ 1.39
CXXC1-212ENST00000589940 TOPAZ1Q8N9V7 1692 aa23.72■■□□□ 1.39
CXXC1-212ENST00000589940 MYBBP1AQ9BQG0 1328 aaKnown RBP23.72■■□□□ 1.39
CXXC1-212ENST00000589940 ANKARQ7Z5J8 1434 aa23.72■■□□□ 1.39
CXXC1-212ENST00000589940 STRCP1A6NGW2 1772 aa23.72■■□□□ 1.39
CXXC1-212ENST00000589940 CGNL1Q0VF96 1302 aa23.71■■□□□ 1.39
CXXC1-212ENST00000589940 NUTM2FA1L443 756 aa23.71■■□□□ 1.39
CXXC1-212ENST00000589940 FMN2Q9NZ56 1722 aa23.71■■□□□ 1.39
CXXC1-212ENST00000589940 CPSF1Q10570 1443 aaKnown RBP23.7■■□□□ 1.38
CXXC1-212ENST00000589940 C14orf37Q86TY3 774 aa23.69■■□□□ 1.38
CXXC1-212ENST00000589940 DMRT2Q9Y5R5 561 aa23.69■■□□□ 1.38
CXXC1-212ENST00000589940 PLEKHG3A1L390 1219 aa23.68■■□□□ 1.38
CXXC1-212ENST00000589940 ITSN1Q15811 1721 aa23.67■■□□□ 1.38
CXXC1-212ENST00000589940 NCOA3Q9Y6Q9 1424 aa23.67■■□□□ 1.38
CXXC1-212ENST00000589940 NSD2O96028 1365 aa23.67■■□□□ 1.38
CXXC1-212ENST00000589940 TMEM94Q12767 1356 aa23.66■■□□□ 1.38
CXXC1-212ENST00000589940 CCDC184Q52MB2 194 aa23.66■■□□□ 1.38
CXXC1-212ENST00000589940 MRS2Q9HD23 443 aa23.66■■□□□ 1.38
CXXC1-212ENST00000589940 NLRP13Q86W25 1043 aa23.65■■□□□ 1.38
CXXC1-212ENST00000589940 ZNF692Q9BU19 519 aaPredicted RBP23.64■■□□□ 1.38
CXXC1-212ENST00000589940 EDC4Q6P2E9 1401 aaKnown RBP23.64■■□□□ 1.37
CXXC1-212ENST00000589940 BRD4O60885 1362 aaPredicted RBP23.63■■□□□ 1.37
CXXC1-212ENST00000589940 C19orf44Q9H6X5 657 aa23.63■■□□□ 1.37
CXXC1-212ENST00000589940 AKAP12Q02952 1782 aa23.63■■□□□ 1.37
CXXC1-212ENST00000589940 ACEP12821 1306 aa23.63■■□□□ 1.37
CXXC1-212ENST00000589940 ZNF335Q9H4Z2 1342 aaPredicted RBP23.62■■□□□ 1.37
CXXC1-212ENST00000589940 MON2Q7Z3U7 1717 aa23.62■■□□□ 1.37
CXXC1-212ENST00000589940 RGPD8O14715 1765 aaPredicted RBP23.62■■□□□ 1.37
CXXC1-212ENST00000589940 POLR3AO14802 1390 aaPredicted RBP23.6■■□□□ 1.37
CXXC1-212ENST00000589940 PPP2R1AP30153 589 aa23.6■■□□□ 1.37
CXXC1-212ENST00000589940 MORC1Q86VD1 984 aa23.6■■□□□ 1.37
CXXC1-212ENST00000589940 DCCP43146 1447 aa23.6■■□□□ 1.37
CXXC1-212ENST00000589940 FYB1O15117 783 aa23.59■■□□□ 1.37
CXXC1-212ENST00000589940 YTHDC1Q96MU7 727 aaKnown RBP23.59■■□□□ 1.37
CXXC1-212ENST00000589940 PMFBP1Q8TBY8 1022 aa23.59■■□□□ 1.37
CXXC1-212ENST00000589940 LRRC7Q96NW7 1537 aa23.58■■□□□ 1.36
CXXC1-212ENST00000589940 USP6P35125 1406 aa23.57■■□□□ 1.36
CXXC1-212ENST00000589940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.57■■□□□ 1.36
CXXC1-212ENST00000589940 NGDNQ8NEJ9 315 aaKnown RBP23.56■■□□□ 1.36
CXXC1-212ENST00000589940 GGNBP2Q9H3C7 697 aa23.56■■□□□ 1.36
CXXC1-212ENST00000589940 KIF20BQ96Q89 1820 aa23.56■■□□□ 1.36
CXXC1-212ENST00000589940 NRKQ7Z2Y5 1582 aa23.55■■□□□ 1.36
CXXC1-212ENST00000589940 ATF3P18847 181 aa23.55■■□□□ 1.36
CXXC1-212ENST00000589940 PHF8Q9UPP1 1060 aa23.55■■□□□ 1.36
CXXC1-212ENST00000589940 ANKRD26Q9UPS8 1709 aa23.55■■□□□ 1.36
CXXC1-212ENST00000589940 MSH6P52701 1360 aa23.54■■□□□ 1.36
CXXC1-212ENST00000589940 XIRP1Q702N8 1843 aaKnown RBP23.53■■□□□ 1.36
CXXC1-212ENST00000589940 SSH2Q76I76 1423 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms