RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 NSD2O96028 1365 aa25.2■■□□□ 1.63
PRKCSH-209ENST00000589838 NINLQ9Y2I6 1382 aa25.2■■□□□ 1.63
PRKCSH-209ENST00000589838 ANKRD36BQ8N2N9 1353 aa25.19■■□□□ 1.62
PRKCSH-209ENST00000589838 SLFN5Q08AF3 891 aa25.18■■□□□ 1.62
PRKCSH-209ENST00000589838 ANP32EQ9BTT0 268 aa25.17■■□□□ 1.62
PRKCSH-209ENST00000589838 CCDC146Q8IYE0 955 aa25.17■■□□□ 1.62
PRKCSH-209ENST00000589838 APAF1O14727 1248 aa25.16■■□□□ 1.62
PRKCSH-209ENST00000589838 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.16■■□□□ 1.62
PRKCSH-209ENST00000589838 TRMT2AQ8IZ69 625 aaKnown RBP25.15■■□□□ 1.62
PRKCSH-209ENST00000589838 STAG3Q9UJ98 1225 aa25.15■■□□□ 1.62
PRKCSH-209ENST00000589838 FBXO31Q5XUX0 539 aaPredicted RBP25.14■■□□□ 1.61
PRKCSH-209ENST00000589838 CFAP53Q96M91 514 aa25.14■■□□□ 1.61
PRKCSH-209ENST00000589838 CLTCQ00610 1675 aaKnown RBP25.13■■□□□ 1.61
PRKCSH-209ENST00000589838 E9PSI1 815 aa25.13■■□□□ 1.61
PRKCSH-209ENST00000589838 STK26Q9P289 416 aa25.12■■□□□ 1.61
PRKCSH-209ENST00000589838 YTHDC2Q9H6S0 1430 aaKnown RBP25.12■■□□□ 1.61
PRKCSH-209ENST00000589838 PTPRMP28827 1452 aa25.11■■□□□ 1.61
PRKCSH-209ENST00000589838 SHPRHQ149N8 1683 aa25.11■■□□□ 1.61
PRKCSH-209ENST00000589838 ATAD2Q6PL18 1390 aa25.11■■□□□ 1.61
PRKCSH-209ENST00000589838 PLIN1O60240 522 aa25.11■■□□□ 1.61
PRKCSH-209ENST00000589838 CABP2Q9NPB3 220 aa25.11■■□□□ 1.61
PRKCSH-209ENST00000589838 ALKQ9UM73 1620 aa25.1■■□□□ 1.61
PRKCSH-209ENST00000589838 POGKQ9P215 609 aa25.09■■□□□ 1.61
PRKCSH-209ENST00000589838 SPATA31D1Q6ZQQ2 1576 aa25.09■■□□□ 1.61
PRKCSH-209ENST00000589838 NKTRP30414 1462 aaKnown RBP25.09■■□□□ 1.61
PRKCSH-209ENST00000589838 CRBNQ96SW2 442 aa25.09■■□□□ 1.61
PRKCSH-209ENST00000589838 SRPK2P78362 688 aaKnown RBP25.08■■□□□ 1.61
PRKCSH-209ENST00000589838 TCERG1O14776 1098 aaKnown RBP25.07■■□□□ 1.6
PRKCSH-209ENST00000589838 RUNDC1Q96C34 613 aa25.07■■□□□ 1.6
PRKCSH-209ENST00000589838 TNNT2P45379 298 aaPredicted RBP25.06■■□□□ 1.6
PRKCSH-209ENST00000589838 SAFB2Q14151 953 aaKnown RBP eCLIP25.06■■□□□ 1.6
PRKCSH-209ENST00000589838 TERF2IPQ9NYB0 399 aa25.06■■□□□ 1.6
PRKCSH-209ENST00000589838 MTHFSP49914 203 aa25.05■■□□□ 1.6
PRKCSH-209ENST00000589838 PRAM1Q96QH2 718 aa25.04■■□□□ 1.6
PRKCSH-209ENST00000589838 ARHGEF40Q8TER5 1519 aa25.04■■□□□ 1.6
PRKCSH-209ENST00000589838 ABCC11Q96J66 1382 aa25.04■■□□□ 1.6
PRKCSH-209ENST00000589838 NCBP3Q53F19 620 aaKnown RBP25.03■■□□□ 1.6
PRKCSH-209ENST00000589838 A2ML1A8K2U0 1454 aa25.03■■□□□ 1.6
PRKCSH-209ENST00000589838 DLC1Q96QB1 1528 aa25.02■■□□□ 1.6
PRKCSH-209ENST00000589838 A0A1W2PP64 1363 aa25.01■■□□□ 1.59
PRKCSH-209ENST00000589838 MSH5O43196 834 aa25.01■■□□□ 1.59
PRKCSH-209ENST00000589838 MINK1Q8N4C8 1332 aaPredicted RBP25.01■■□□□ 1.59
PRKCSH-209ENST00000589838 KIF13AQ9H1H9 1805 aa25.01■■□□□ 1.59
PRKCSH-209ENST00000589838 WWC1Q8IX03 1113 aa25■■□□□ 1.59
PRKCSH-209ENST00000589838 RIMS2Q9UQ26 1411 aa25■■□□□ 1.59
PRKCSH-209ENST00000589838 MS4A1P11836 297 aa25■■□□□ 1.59
PRKCSH-209ENST00000589838 ANKRD26Q9UPS8 1709 aa24.99■■□□□ 1.59
PRKCSH-209ENST00000589838 MED14O60244 1454 aa24.99■■□□□ 1.59
PRKCSH-209ENST00000589838 ESF1Q9H501 851 aaKnown RBP24.98■■□□□ 1.59
PRKCSH-209ENST00000589838 ERICH6Q7L0X2 663 aa24.98■■□□□ 1.59
PRKCSH-209ENST00000589838 HDGFL2Q7Z4V5 671 aaPredicted RBP24.98■■□□□ 1.59
PRKCSH-209ENST00000589838 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.98■■□□□ 1.59
PRKCSH-209ENST00000589838 SPINK5Q9NQ38 1064 aaPredicted RBP24.98■■□□□ 1.59
PRKCSH-209ENST00000589838 C20orf194Q5TEA3 1177 aa24.97■■□□□ 1.59
PRKCSH-209ENST00000589838 IQSEC2Q5JU85 1478 aa24.96■■□□□ 1.59
PRKCSH-209ENST00000589838 CCDC27Q2M243 656 aa24.96■■□□□ 1.59
PRKCSH-209ENST00000589838 WDR63Q8IWG1 891 aa24.96■■□□□ 1.59
PRKCSH-209ENST00000589838 TCP11L2Q8N4U5 519 aa24.96■■□□□ 1.59
PRKCSH-209ENST00000589838 MLECQ14165 292 aa24.95■■□□□ 1.58
PRKCSH-209ENST00000589838 CDK19Q9BWU1 502 aa24.95■■□□□ 1.58
PRKCSH-209ENST00000589838 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
PRKCSH-209ENST00000589838 HDGFP51858 240 aaKnown RBP24.94■■□□□ 1.58
PRKCSH-209ENST00000589838 SETD1AO15047 1707 aaKnown RBP24.93■■□□□ 1.58
PRKCSH-209ENST00000589838 PHF23Q9BUL5 403 aaPredicted RBP24.93■■□□□ 1.58
PRKCSH-209ENST00000589838 ANP32AP39687 249 aaKnown RBP24.92■■□□□ 1.58
PRKCSH-209ENST00000589838 CENPQQ7L2Z9 268 aaPredicted RBP24.92■■□□□ 1.58
PRKCSH-209ENST00000589838 CD163L1Q9NR16 1453 aa24.91■■□□□ 1.58
PRKCSH-209ENST00000589838 U2AF1L5P0DN76 240 aaPredicted RBP24.9■■□□□ 1.58
PRKCSH-209ENST00000589838 U2AF1Q01081 240 aaKnown RBP eCLIP24.9■■□□□ 1.58
PRKCSH-209ENST00000589838 ZMYM3Q14202 1370 aa24.9■■□□□ 1.58
PRKCSH-209ENST00000589838 FYB1O15117 783 aa24.89■■□□□ 1.58
PRKCSH-209ENST00000589838 DMRT2Q9Y5R5 561 aa24.89■■□□□ 1.58
PRKCSH-209ENST00000589838 KIF20BQ96Q89 1820 aa24.89■■□□□ 1.57
PRKCSH-209ENST00000589838 GGNBP2Q9H3C7 697 aa24.89■■□□□ 1.57
PRKCSH-209ENST00000589838 PDE3AQ14432 1141 aa24.87■■□□□ 1.57
PRKCSH-209ENST00000589838 NEUROD2Q15784 382 aa24.87■■□□□ 1.57
PRKCSH-209ENST00000589838 KDM2BQ8NHM5 1336 aa24.87■■□□□ 1.57
PRKCSH-209ENST00000589838 ATP7BP35670 1465 aa24.86■■□□□ 1.57
PRKCSH-209ENST00000589838 BCAR3O75815 825 aa24.86■■□□□ 1.57
PRKCSH-209ENST00000589838 ADGRB2O60241 1585 aa24.86■■□□□ 1.57
PRKCSH-209ENST00000589838 CABP1Q9NZU7 370 aa24.85■■□□□ 1.57
PRKCSH-209ENST00000589838 RRP7AQ9Y3A4 280 aaKnown RBP24.85■■□□□ 1.57
PRKCSH-209ENST00000589838 NLRP1Q9C000 1473 aa24.85■■□□□ 1.57
PRKCSH-209ENST00000589838 PDE4AP27815 886 aa24.85■■□□□ 1.57
PRKCSH-209ENST00000589838 PNNQ9H307 717 aaKnown RBP24.85■■□□□ 1.57
PRKCSH-209ENST00000589838 MYH16Q9H6N6 1097 aa24.85■■□□□ 1.57
PRKCSH-209ENST00000589838 SIRT1Q96EB6 747 aa24.83■■□□□ 1.57
PRKCSH-209ENST00000589838 NRXN3Q9Y4C0 1643 aa24.83■■□□□ 1.57
PRKCSH-209ENST00000589838 COL3A1P02461 1466 aaPredicted RBP24.83■■□□□ 1.57
PRKCSH-209ENST00000589838 BACH2Q9BYV9 841 aa24.82■■□□□ 1.56
PRKCSH-209ENST00000589838 TNRQ92752 1358 aa24.82■■□□□ 1.56
PRKCSH-209ENST00000589838 KNDC1Q76NI1 1749 aa24.81■■□□□ 1.56
PRKCSH-209ENST00000589838 CANXP27824 592 aaKnown RBP24.81■■□□□ 1.56
PRKCSH-209ENST00000589838 WAPLQ7Z5K2 1190 aa24.81■■□□□ 1.56
PRKCSH-209ENST00000589838 IPO9Q96P70 1041 aaKnown RBP24.8■■□□□ 1.56
PRKCSH-209ENST00000589838 U2SURPO15042 1029 aaKnown RBP24.79■■□□□ 1.56
PRKCSH-209ENST00000589838 AAMPQ13685 434 aa24.79■■□□□ 1.56
PRKCSH-209ENST00000589838 FAM135BQ49AJ0 1406 aa24.79■■□□□ 1.56
PRKCSH-209ENST00000589838 NOP58Q9Y2X3 529 aaKnown RBP24.79■■□□□ 1.56
PRKCSH-209ENST00000589838 MAPK8IP3Q9UPT6 1336 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms