RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PLCH1Q4KWH8 1693 aa9.77□□□□□ -0.85
VPS25-204ENST00000589577 RGPD1P0DJD0 1748 aa9.76□□□□□ -0.85
VPS25-204ENST00000589577 CEP350Q5VT06 3117 aa9.76□□□□□ -0.85
VPS25-204ENST00000589577 USP32Q8NFA0 1604 aa9.75□□□□□ -0.85
VPS25-204ENST00000589577 CAMTA1Q9Y6Y1 1673 aa9.74□□□□□ -0.85
VPS25-204ENST00000589577 CHGAP10645 457 aaKnown RBP9.74□□□□□ -0.85
VPS25-204ENST00000589577 SF3B2Q13435 895 aaKnown RBP9.74□□□□□ -0.85
VPS25-204ENST00000589577 KANK4Q5T7N3 995 aaPredicted RBP9.74□□□□□ -0.85
VPS25-204ENST00000589577 ANKRD30AQ9BXX3 1397 aa9.74□□□□□ -0.85
VPS25-204ENST00000589577 NWD2Q9ULI1 1742 aa9.73□□□□□ -0.85
VPS25-204ENST00000589577 ADGRL2O95490 1459 aa9.73□□□□□ -0.85
VPS25-204ENST00000589577 R3HDM1Q15032 1099 aaKnown RBP9.73□□□□□ -0.85
VPS25-204ENST00000589577 SEPT12Q8IYM1 358 aa9.73□□□□□ -0.85
VPS25-204ENST00000589577 ABCA3Q99758 1704 aa9.73□□□□□ -0.85
VPS25-204ENST00000589577 UNC5CLQ8IV45 518 aa9.72□□□□□ -0.85
VPS25-204ENST00000589577 CHIC2Q9UKJ5 165 aa9.71□□□□□ -0.86
VPS25-204ENST00000589577 DISP2A7MBM2 1401 aa9.71□□□□□ -0.86
VPS25-204ENST00000589577 RREB1Q92766 1687 aa9.71□□□□□ -0.86
VPS25-204ENST00000589577 NRAPQ86VF7 1730 aa9.7□□□□□ -0.86
VPS25-204ENST00000589577 ONECUT3O60422 494 aaPredicted RBP9.7□□□□□ -0.86
VPS25-204ENST00000589577 BAG6P46379 1132 aa9.7□□□□□ -0.86
VPS25-204ENST00000589577 EN1Q05925 392 aaPredicted RBP9.7□□□□□ -0.86
VPS25-204ENST00000589577 ROBO2Q9HCK4 1378 aa9.7□□□□□ -0.86
VPS25-204ENST00000589577 NEXMIFQ5QGS0 1516 aa9.7□□□□□ -0.86
VPS25-204ENST00000589577 CDC42BPGQ6DT37 1551 aa9.7□□□□□ -0.86
VPS25-204ENST00000589577 NUP188Q5SRE5 1749 aa9.69□□□□□ -0.86
VPS25-204ENST00000589577 KRT27Q7Z3Y8 459 aa9.69□□□□□ -0.86
VPS25-204ENST00000589577 PRAG1Q86YV5 1406 aa9.69□□□□□ -0.86
VPS25-204ENST00000589577 ANKRD50Q9ULJ7 1429 aa9.69□□□□□ -0.86
VPS25-204ENST00000589577 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
VPS25-204ENST00000589577 VPS8Q8N3P4 1428 aa9.67□□□□□ -0.86
VPS25-204ENST00000589577 NPHP3Q7Z494 1330 aa9.67□□□□□ -0.86
VPS25-204ENST00000589577 VPS72Q15906 364 aa9.67□□□□□ -0.86
VPS25-204ENST00000589577 THSD7AQ9UPZ6 1657 aa9.67□□□□□ -0.86
VPS25-204ENST00000589577 SENP3-EIF4A1A0A087X0R7 540 aa9.65□□□□□ -0.86
VPS25-204ENST00000589577 ADGRB2O60241 1585 aa9.65□□□□□ -0.86
VPS25-204ENST00000589577 FOXO3O43524 673 aa9.64□□□□□ -0.87
VPS25-204ENST00000589577 EZH2Q15910 746 aaKnown RBP9.64□□□□□ -0.87
VPS25-204ENST00000589577 FAM182BQ5T319 152 aa9.64□□□□□ -0.87
VPS25-204ENST00000589577 ZNF784Q8NCA9 323 aaPredicted RBP9.64□□□□□ -0.87
VPS25-204ENST00000589577 KIF1AQ12756 1690 aa9.64□□□□□ -0.87
VPS25-204ENST00000589577 CLTCL1P53675 1640 aa9.64□□□□□ -0.87
VPS25-204ENST00000589577 SPATA31A3Q5VYP0 1347 aa9.63□□□□□ -0.87
VPS25-204ENST00000589577 FMN2Q9NZ56 1722 aa9.63□□□□□ -0.87
VPS25-204ENST00000589577 ESCO1Q5FWF5 840 aa9.63□□□□□ -0.87
VPS25-204ENST00000589577 RGPD8O14715 1765 aaPredicted RBP9.63□□□□□ -0.87
VPS25-204ENST00000589577 NINLQ9Y2I6 1382 aa9.63□□□□□ -0.87
VPS25-204ENST00000589577 CHD4Q14839 1912 aa9.62□□□□□ -0.87
VPS25-204ENST00000589577 CAMKK2Q96RR4 588 aa9.62□□□□□ -0.87
VPS25-204ENST00000589577 HFM1A2PYH4 1435 aa9.62□□□□□ -0.87
VPS25-204ENST00000589577 CASZ1Q86V15 1759 aa9.6□□□□□ -0.87
VPS25-204ENST00000589577 C1QTNF8P60827 252 aa9.6□□□□□ -0.87
VPS25-204ENST00000589577 FAM98CQ17RN3 349 aaKnown RBP9.6□□□□□ -0.87
VPS25-204ENST00000589577 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
VPS25-204ENST00000589577 CCDC9Q9Y3X0 531 aaKnown RBP9.6□□□□□ -0.87
VPS25-204ENST00000589577 KIF1BO60333 1816 aa9.6□□□□□ -0.87
VPS25-204ENST00000589577 NRKQ7Z2Y5 1582 aa9.59□□□□□ -0.87
VPS25-204ENST00000589577 GOLGB1Q14789 3259 aaKnown RBP9.59□□□□□ -0.87
VPS25-204ENST00000589577 CCDC144AA2RUR9 1427 aa9.59□□□□□ -0.87
VPS25-204ENST00000589577 NAIPQ13075 1403 aa9.59□□□□□ -0.87
VPS25-204ENST00000589577 TNS3Q68CZ2 1445 aa9.59□□□□□ -0.87
VPS25-204ENST00000589577 MYOM1P52179 1685 aa9.59□□□□□ -0.87
VPS25-204ENST00000589577 CRYBG1Q9Y4K1 1723 aa9.59□□□□□ -0.87
VPS25-204ENST00000589577 COL14A1Q05707 1796 aaKnown RBP9.58□□□□□ -0.88
VPS25-204ENST00000589577 A0A0G2JS52 829 aa9.58□□□□□ -0.88
VPS25-204ENST00000589577 MYT1Q01538 1121 aa9.58□□□□□ -0.88
VPS25-204ENST00000589577 ZNF326Q5BKZ1 582 aaKnown RBP9.58□□□□□ -0.88
VPS25-204ENST00000589577 IFT172Q9UG01 1749 aa9.58□□□□□ -0.88
VPS25-204ENST00000589577 LRPPRCP42704 1394 aaKnown RBP9.58□□□□□ -0.88
VPS25-204ENST00000589577 PARD3Q8TEW0 1356 aa9.58□□□□□ -0.88
VPS25-204ENST00000589577 PPLO60437 1756 aa9.58□□□□□ -0.88
VPS25-204ENST00000589577 FAM83GA6ND36 823 aa9.57□□□□□ -0.88
VPS25-204ENST00000589577 NUTM2FA1L443 756 aa9.56□□□□□ -0.88
VPS25-204ENST00000589577 SPON1Q9HCB6 807 aa9.56□□□□□ -0.88
VPS25-204ENST00000589577 KNDC1Q76NI1 1749 aa9.56□□□□□ -0.88
VPS25-204ENST00000589577 TRPM3Q9HCF6 1732 aaPredicted RBP9.56□□□□□ -0.88
VPS25-204ENST00000589577 KCNQ2O43526 872 aa9.55□□□□□ -0.88
VPS25-204ENST00000589577 TRIM37O94972 964 aa9.55□□□□□ -0.88
VPS25-204ENST00000589577 PPP1R1BQ9UD71 204 aaPredicted RBP9.55□□□□□ -0.88
VPS25-204ENST00000589577 ALS2Q96Q42 1657 aa9.55□□□□□ -0.88
VPS25-204ENST00000589577 NUP155O75694 1391 aa9.54□□□□□ -0.88
VPS25-204ENST00000589577 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
VPS25-204ENST00000589577 KRT28Q7Z3Y7 464 aa9.54□□□□□ -0.88
VPS25-204ENST00000589577 RGPD3A6NKT7 1758 aaPredicted RBP9.54□□□□□ -0.88
VPS25-204ENST00000589577 RGPD4Q7Z3J3 1758 aa9.54□□□□□ -0.88
VPS25-204ENST00000589577 TECPR2O15040 1411 aa9.54□□□□□ -0.88
VPS25-204ENST00000589577 SPATA31A5Q5VU36 1347 aa9.54□□□□□ -0.88
VPS25-204ENST00000589577 SPATA31A7Q8IWB4 1347 aa9.54□□□□□ -0.88
VPS25-204ENST00000589577 DCAF8L1A6NGE4 600 aa9.53□□□□□ -0.88
VPS25-204ENST00000589577 APBA3O96018 575 aa9.53□□□□□ -0.88
VPS25-204ENST00000589577 HAP1P54257 671 aaPredicted RBP9.53□□□□□ -0.88
VPS25-204ENST00000589577 PLEKHH1Q9ULM0 1364 aa9.52□□□□□ -0.88
VPS25-204ENST00000589577 BTG4Q9NY30 223 aa9.52□□□□□ -0.89
VPS25-204ENST00000589577 RRBP1Q9P2E9 1410 aaKnown RBP9.52□□□□□ -0.89
VPS25-204ENST00000589577 NRXN1Q9ULB1 1477 aa9.52□□□□□ -0.89
VPS25-204ENST00000589577 SBNO1A3KN83 1393 aa9.51□□□□□ -0.89
VPS25-204ENST00000589577 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
VPS25-204ENST00000589577 ARHGEF10O15013 1369 aa9.5□□□□□ -0.89
VPS25-204ENST00000589577 ROCK1Q13464 1354 aa9.5□□□□□ -0.89
VPS25-204ENST00000589577 SBF2Q86WG5 1849 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms