RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ADAMTS13Q76LX8 1427 aa16.52■□□□□ 0.24
CCBE1-203ENST00000589116 TULP4Q9NRJ4 1543 aa16.52■□□□□ 0.24
CCBE1-203ENST00000589116 DIP2AQ14689 1571 aa16.52■□□□□ 0.24
CCBE1-203ENST00000589116 CENPBP07199 599 aaPredicted RBP16.51■□□□□ 0.23
CCBE1-203ENST00000589116 EVC2Q86UK5 1308 aa16.51■□□□□ 0.23
CCBE1-203ENST00000589116 PER1O15534 1290 aaPredicted RBP16.5■□□□□ 0.23
CCBE1-203ENST00000589116 TXNDC2Q86VQ3 553 aa16.5■□□□□ 0.23
CCBE1-203ENST00000589116 STK26Q9P289 416 aa16.5■□□□□ 0.23
CCBE1-203ENST00000589116 MED14O60244 1454 aa16.5■□□□□ 0.23
CCBE1-203ENST00000589116 METP08581 1390 aa16.5■□□□□ 0.23
CCBE1-203ENST00000589116 LTKP29376 864 aa16.5■□□□□ 0.23
CCBE1-203ENST00000589116 PANK3Q9H999 370 aa16.5■□□□□ 0.23
CCBE1-203ENST00000589116 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
CCBE1-203ENST00000589116 FAM135BQ49AJ0 1406 aa16.48■□□□□ 0.23
CCBE1-203ENST00000589116 RALBP1Q15311 655 aa16.48■□□□□ 0.23
CCBE1-203ENST00000589116 SIRT1Q96EB6 747 aa16.48■□□□□ 0.23
CCBE1-203ENST00000589116 PRAM1Q96QH2 718 aa16.48■□□□□ 0.23
CCBE1-203ENST00000589116 RGS17Q9UGC6 210 aaPredicted RBP16.48■□□□□ 0.23
CCBE1-203ENST00000589116 POGKQ9P215 609 aa16.47■□□□□ 0.23
CCBE1-203ENST00000589116 BCANQ96GW7 911 aa16.46■□□□□ 0.23
CCBE1-203ENST00000589116 PARD3Q8TEW0 1356 aa16.46■□□□□ 0.23
CCBE1-203ENST00000589116 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
CCBE1-203ENST00000589116 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
CCBE1-203ENST00000589116 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
CCBE1-203ENST00000589116 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
CCBE1-203ENST00000589116 TBX22Q9Y458 520 aa16.43■□□□□ 0.22
CCBE1-203ENST00000589116 MYBBP1AQ9BQG0 1328 aaKnown RBP16.43■□□□□ 0.22
CCBE1-203ENST00000589116 SAFB2Q14151 953 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCBE1-203ENST00000589116 USP32Q8NFA0 1604 aa16.42■□□□□ 0.22
CCBE1-203ENST00000589116 PIK3R4Q99570 1358 aa16.41■□□□□ 0.22
CCBE1-203ENST00000589116 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
CCBE1-203ENST00000589116 ANKLE2Q86XL3 938 aa16.4■□□□□ 0.22
CCBE1-203ENST00000589116 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
CCBE1-203ENST00000589116 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
CCBE1-203ENST00000589116 ADGRB2O60241 1585 aa16.4■□□□□ 0.22
CCBE1-203ENST00000589116 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
CCBE1-203ENST00000589116 PLEKHH1Q9ULM0 1364 aa16.4■□□□□ 0.22
CCBE1-203ENST00000589116 XRN1Q8IZH2 1706 aaKnown RBP16.39■□□□□ 0.22
CCBE1-203ENST00000589116 ANKRD36BQ8N2N9 1353 aa16.39■□□□□ 0.21
CCBE1-203ENST00000589116 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
CCBE1-203ENST00000589116 POTEAQ6S8J7 498 aa16.39■□□□□ 0.21
CCBE1-203ENST00000589116 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
CCBE1-203ENST00000589116 WAPLQ7Z5K2 1190 aa16.38■□□□□ 0.21
CCBE1-203ENST00000589116 PTPRUQ92729 1446 aa16.38■□□□□ 0.21
CCBE1-203ENST00000589116 NLRP13Q86W25 1043 aa16.37■□□□□ 0.21
CCBE1-203ENST00000589116 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
CCBE1-203ENST00000589116 CABP2Q9NPB3 220 aa16.37■□□□□ 0.21
CCBE1-203ENST00000589116 NPHP4O75161 1426 aaPredicted RBP16.37■□□□□ 0.21
CCBE1-203ENST00000589116 ROBO2Q9HCK4 1378 aa16.37■□□□□ 0.21
CCBE1-203ENST00000589116 CCDC184Q52MB2 194 aa16.37■□□□□ 0.21
CCBE1-203ENST00000589116 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
CCBE1-203ENST00000589116 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
CCBE1-203ENST00000589116 CDK19Q9BWU1 502 aa16.36■□□□□ 0.21
CCBE1-203ENST00000589116 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
CCBE1-203ENST00000589116 NSD3Q9BZ95 1437 aa16.35■□□□□ 0.21
CCBE1-203ENST00000589116 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
CCBE1-203ENST00000589116 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
CCBE1-203ENST00000589116 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
CCBE1-203ENST00000589116 WASLO00401 505 aaPredicted RBP16.34■□□□□ 0.21
CCBE1-203ENST00000589116 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.33■□□□□ 0.21
CCBE1-203ENST00000589116 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.2
CCBE1-203ENST00000589116 ATP7BP35670 1465 aa16.33■□□□□ 0.2
CCBE1-203ENST00000589116 AMOTL2Q9Y2J4 779 aa16.33■□□□□ 0.2
CCBE1-203ENST00000589116 NSD2O96028 1365 aa16.32■□□□□ 0.2
CCBE1-203ENST00000589116 TERF2IPQ9NYB0 399 aa16.31■□□□□ 0.2
CCBE1-203ENST00000589116 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
CCBE1-203ENST00000589116 CD163L1Q9NR16 1453 aa16.3■□□□□ 0.2
CCBE1-203ENST00000589116 CGNL1Q0VF96 1302 aa16.3■□□□□ 0.2
CCBE1-203ENST00000589116 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
CCBE1-203ENST00000589116 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
CCBE1-203ENST00000589116 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
CCBE1-203ENST00000589116 PNISRQ8TF01 805 aaKnown RBP16.28■□□□□ 0.2
CCBE1-203ENST00000589116 TOPAZ1Q8N9V7 1692 aa16.28■□□□□ 0.2
CCBE1-203ENST00000589116 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
CCBE1-203ENST00000589116 CDC42BPGQ6DT37 1551 aa16.27■□□□□ 0.19
CCBE1-203ENST00000589116 PPP2R1AP30153 589 aa16.27■□□□□ 0.19
CCBE1-203ENST00000589116 PPIP5K1Q6PFW1 1433 aa16.26■□□□□ 0.19
CCBE1-203ENST00000589116 NWD1Q149M9 1564 aa16.26■□□□□ 0.19
CCBE1-203ENST00000589116 INSRP06213 1382 aa16.26■□□□□ 0.19
CCBE1-203ENST00000589116 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
CCBE1-203ENST00000589116 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
CCBE1-203ENST00000589116 CABP1Q9NZU7 370 aa16.25■□□□□ 0.19
CCBE1-203ENST00000589116 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
CCBE1-203ENST00000589116 AKAP12Q02952 1782 aa16.25■□□□□ 0.19
CCBE1-203ENST00000589116 KCNA6P17658 529 aa16.24■□□□□ 0.19
CCBE1-203ENST00000589116 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCBE1-203ENST00000589116 NUDT16Q96DE0 195 aaKnown RBP16.24■□□□□ 0.19
CCBE1-203ENST00000589116 CPSF1Q10570 1443 aaKnown RBP16.24■□□□□ 0.19
CCBE1-203ENST00000589116 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
CCBE1-203ENST00000589116 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
CCBE1-203ENST00000589116 MORC1Q86VD1 984 aa16.21■□□□□ 0.19
CCBE1-203ENST00000589116 UPF1Q92900 1129 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCBE1-203ENST00000589116 PRR36Q9H6K5 1346 aa16.21■□□□□ 0.19
CCBE1-203ENST00000589116 ANKARQ7Z5J8 1434 aa16.21■□□□□ 0.19
CCBE1-203ENST00000589116 FMN2Q9NZ56 1722 aa16.21■□□□□ 0.19
CCBE1-203ENST00000589116 NALCNQ8IZF0 1738 aa16.2■□□□□ 0.18
CCBE1-203ENST00000589116 ZBED9Q6R2W3 1325 aa16.19■□□□□ 0.18
CCBE1-203ENST00000589116 NKTRP30414 1462 aaKnown RBP16.19■□□□□ 0.18
CCBE1-203ENST00000589116 ZNF692Q9BU19 519 aaPredicted RBP16.18■□□□□ 0.18
CCBE1-203ENST00000589116 POLR3AO14802 1390 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms