RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 QRICH2Q9H0J4 1663 aa26.95■■□□□ 1.91
CLPTM1-209ENST00000588855 CDC42BPGQ6DT37 1551 aa26.92■■□□□ 1.9
CLPTM1-209ENST00000588855 C19orf44Q9H6X5 657 aa26.92■■□□□ 1.9
CLPTM1-209ENST00000588855 ADGRB2O60241 1585 aa26.91■■□□□ 1.9
CLPTM1-209ENST00000588855 EIF3AQ14152 1382 aaKnown RBP26.91■■□□□ 1.9
CLPTM1-209ENST00000588855 DCCP43146 1447 aa26.91■■□□□ 1.9
CLPTM1-209ENST00000588855 CENPJQ9HC77 1338 aaPredicted RBP26.9■■□□□ 1.9
CLPTM1-209ENST00000588855 MINK1Q8N4C8 1332 aaPredicted RBP26.88■■□□□ 1.89
CLPTM1-209ENST00000588855 USP47Q96K76 1375 aa26.86■■□□□ 1.89
CLPTM1-209ENST00000588855 FMN2Q9NZ56 1722 aa26.86■■□□□ 1.89
CLPTM1-209ENST00000588855 UBAP1LF5GYI3 381 aa26.85■■□□□ 1.89
CLPTM1-209ENST00000588855 ATF3P18847 181 aa26.85■■□□□ 1.89
CLPTM1-209ENST00000588855 HIRIP3Q9BW71 556 aaPredicted RBP26.85■■□□□ 1.89
CLPTM1-209ENST00000588855 CADPS2Q86UW7 1296 aa26.84■■□□□ 1.89
CLPTM1-209ENST00000588855 MST1RQ04912 1400 aa26.83■■□□□ 1.88
CLPTM1-209ENST00000588855 TOM1O60784 492 aa26.82■■□□□ 1.88
CLPTM1-209ENST00000588855 TULP4Q9NRJ4 1543 aa26.79■■□□□ 1.88
CLPTM1-209ENST00000588855 ST20-MTHFSA0A0A6YYL1 179 aa26.78■■□□□ 1.88
CLPTM1-209ENST00000588855 RGPD8O14715 1765 aaPredicted RBP26.78■■□□□ 1.88
CLPTM1-209ENST00000588855 SBNO2Q9Y2G9 1366 aa26.78■■□□□ 1.88
CLPTM1-209ENST00000588855 USP32Q8NFA0 1604 aa26.77■■□□□ 1.88
CLPTM1-209ENST00000588855 SLAIN2Q9P270 581 aa26.77■■□□□ 1.88
CLPTM1-209ENST00000588855 C1orf167Q5SNV9 1468 aa26.76■■□□□ 1.87
CLPTM1-209ENST00000588855 ROBO1Q9Y6N7 1651 aa26.76■■□□□ 1.87
CLPTM1-209ENST00000588855 NUTM2FA1L443 756 aa26.75■■□□□ 1.87
CLPTM1-209ENST00000588855 WASLO00401 505 aaPredicted RBP26.75■■□□□ 1.87
CLPTM1-209ENST00000588855 PIP4K2BP78356 416 aa26.75■■□□□ 1.87
CLPTM1-209ENST00000588855 SCAF1Q9H7N4 1312 aaKnown RBP26.73■■□□□ 1.87
CLPTM1-209ENST00000588855 ZEB1P37275 1124 aaPredicted RBP26.73■■□□□ 1.87
CLPTM1-209ENST00000588855 TESK2Q96S53 571 aa26.72■■□□□ 1.87
CLPTM1-209ENST00000588855 EIF4G2P78344 907 aaKnown RBP eCLIP26.71■■□□□ 1.87
CLPTM1-209ENST00000588855 FBXO41Q8TF61 875 aa26.71■■□□□ 1.87
CLPTM1-209ENST00000588855 CDK19Q9BWU1 502 aa26.71■■□□□ 1.87
CLPTM1-209ENST00000588855 ANKARQ7Z5J8 1434 aa26.71■■□□□ 1.87
CLPTM1-209ENST00000588855 HSPA5P11021 654 aaKnown RBP26.7■■□□□ 1.87
CLPTM1-209ENST00000588855 ATP7BP35670 1465 aa26.7■■□□□ 1.87
CLPTM1-209ENST00000588855 PRR36Q9H6K5 1346 aa26.69■■□□□ 1.86
CLPTM1-209ENST00000588855 EVC2Q86UK5 1308 aa26.69■■□□□ 1.86
CLPTM1-209ENST00000588855 TOPAZ1Q8N9V7 1692 aa26.68■■□□□ 1.86
CLPTM1-209ENST00000588855 ITSN1Q15811 1721 aa26.68■■□□□ 1.86
CLPTM1-209ENST00000588855 SRPK2P78362 688 aaKnown RBP26.66■■□□□ 1.86
CLPTM1-209ENST00000588855 BRINP3Q76B58 766 aa26.66■■□□□ 1.86
CLPTM1-209ENST00000588855 ORAI2Q96SN7 254 aa26.66■■□□□ 1.86
CLPTM1-209ENST00000588855 CABP2Q9NPB3 220 aa26.66■■□□□ 1.86
CLPTM1-209ENST00000588855 KIF1AQ12756 1690 aa26.65■■□□□ 1.86
CLPTM1-209ENST00000588855 ESCO1Q5FWF5 840 aa26.64■■□□□ 1.85
CLPTM1-209ENST00000588855 NHSL1Q5SYE7 1610 aa26.63■■□□□ 1.85
CLPTM1-209ENST00000588855 DISP3Q9P2K9 1392 aa26.63■■□□□ 1.85
CLPTM1-209ENST00000588855 NUDT16Q96DE0 195 aaKnown RBP26.63■■□□□ 1.85
CLPTM1-209ENST00000588855 AHDC1Q5TGY3 1603 aaPredicted RBP26.6■■□□□ 1.85
CLPTM1-209ENST00000588855 PHLPP1O60346 1717 aa26.59■■□□□ 1.85
CLPTM1-209ENST00000588855 TMF1P82094 1093 aa26.59■■□□□ 1.85
CLPTM1-209ENST00000588855 SLC24A1O60721 1099 aa26.58■■□□□ 1.85
CLPTM1-209ENST00000588855 PHF8Q9UPP1 1060 aa26.58■■□□□ 1.85
CLPTM1-209ENST00000588855 PPIP5K1Q6PFW1 1433 aa26.56■■□□□ 1.84
CLPTM1-209ENST00000588855 DDX17Q92841 729 aaKnown RBP26.56■■□□□ 1.84
CLPTM1-209ENST00000588855 CCDC61Q9Y6R9 512 aa26.56■■□□□ 1.84
CLPTM1-209ENST00000588855 ATAD2Q6PL18 1390 aa26.56■■□□□ 1.84
CLPTM1-209ENST00000588855 PMFBP1Q8TBY8 1022 aa26.55■■□□□ 1.84
CLPTM1-209ENST00000588855 COL16A1Q07092 1604 aaPredicted RBP26.53■■□□□ 1.84
CLPTM1-209ENST00000588855 FOXO3O43524 673 aa26.51■■□□□ 1.83
CLPTM1-209ENST00000588855 HSPA1LP34931 641 aa26.51■■□□□ 1.83
CLPTM1-209ENST00000588855 PUS7Q96PZ0 661 aaKnown RBP26.51■■□□□ 1.83
CLPTM1-209ENST00000588855 ILDR1Q86SU0 546 aaPredicted RBP26.49■■□□□ 1.83
CLPTM1-209ENST00000588855 CABP1Q9NZU7 370 aa26.49■■□□□ 1.83
CLPTM1-209ENST00000588855 PXDNQ92626 1479 aa26.49■■□□□ 1.83
CLPTM1-209ENST00000588855 MYOM1P52179 1685 aa26.49■■□□□ 1.83
CLPTM1-209ENST00000588855 NPHP3Q7Z494 1330 aa26.49■■□□□ 1.83
CLPTM1-209ENST00000588855 PLEKHG3A1L390 1219 aa26.49■■□□□ 1.83
CLPTM1-209ENST00000588855 AKAP12Q02952 1782 aa26.48■■□□□ 1.83
CLPTM1-209ENST00000588855 CDCA8Q53HL2 280 aa26.48■■□□□ 1.83
CLPTM1-209ENST00000588855 POLR3AO14802 1390 aaPredicted RBP26.48■■□□□ 1.83
CLPTM1-209ENST00000588855 XPCQ01831 940 aaPredicted RBP26.47■■□□□ 1.83
CLPTM1-209ENST00000588855 NGDNQ8NEJ9 315 aaKnown RBP26.47■■□□□ 1.83
CLPTM1-209ENST00000588855 ACEP12821 1306 aa26.47■■□□□ 1.83
CLPTM1-209ENST00000588855 C11orf95C9JLR9 678 aaPredicted RBP26.46■■□□□ 1.83
CLPTM1-209ENST00000588855 TRPM3Q9HCF6 1732 aaPredicted RBP26.45■■□□□ 1.83
CLPTM1-209ENST00000588855 SOS2Q07890 1332 aaPredicted RBP26.45■■□□□ 1.83
CLPTM1-209ENST00000588855 TMC1Q8TDI8 760 aa26.44■■□□□ 1.82
CLPTM1-209ENST00000588855 CD163L1Q9NR16 1453 aa26.43■■□□□ 1.82
CLPTM1-209ENST00000588855 POLR3GLQ9BT43 218 aa26.43■■□□□ 1.82
CLPTM1-209ENST00000588855 SLC12A5Q9H2X9 1139 aa26.43■■□□□ 1.82
CLPTM1-209ENST00000588855 PSME1Q06323 249 aa26.42■■□□□ 1.82
CLPTM1-209ENST00000588855 KRT28Q7Z3Y7 464 aa26.42■■□□□ 1.82
CLPTM1-209ENST00000588855 MON2Q7Z3U7 1717 aa26.42■■□□□ 1.82
CLPTM1-209ENST00000588855 NINLQ9Y2I6 1382 aa26.41■■□□□ 1.82
CLPTM1-209ENST00000588855 CPSF1Q10570 1443 aaKnown RBP26.4■■□□□ 1.82
CLPTM1-209ENST00000588855 KIF7Q2M1P5 1343 aa26.4■■□□□ 1.82
CLPTM1-209ENST00000588855 NRKQ7Z2Y5 1582 aa26.39■■□□□ 1.81
CLPTM1-209ENST00000588855 USP6P35125 1406 aa26.38■■□□□ 1.81
CLPTM1-209ENST00000588855 SHPRHQ149N8 1683 aa26.37■■□□□ 1.81
CLPTM1-209ENST00000588855 ALS2Q96Q42 1657 aa26.37■■□□□ 1.81
CLPTM1-209ENST00000588855 A0A1W2PP64 1363 aa26.37■■□□□ 1.81
CLPTM1-209ENST00000588855 TNS3Q68CZ2 1445 aa26.36■■□□□ 1.81
CLPTM1-209ENST00000588855 SBNO1A3KN83 1393 aa26.36■■□□□ 1.81
CLPTM1-209ENST00000588855 LRRC59Q96AG4 307 aaKnown RBP26.35■■□□□ 1.81
CLPTM1-209ENST00000588855 CCDC7Q96M83 1385 aa26.35■■□□□ 1.81
CLPTM1-209ENST00000588855 KTN1Q86UP2 1357 aaKnown RBP26.34■■□□□ 1.81
CLPTM1-209ENST00000588855 ANKRD36BQ8N2N9 1353 aa26.34■■□□□ 1.81
CLPTM1-209ENST00000588855 SPATA31A3Q5VYP0 1347 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms