RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 ARMCX6Q7L4S7 300 aa9.43□□□□□ -0.9
LAMA3-210ENST00000588770 TPM4P67936 248 aa9.43□□□□□ -0.9
LAMA3-210ENST00000588770 DONSONQ9NYP3 566 aa9.43□□□□□ -0.9
LAMA3-210ENST00000588770 GUCY2CP25092 1073 aa9.42□□□□□ -0.9
LAMA3-210ENST00000588770 TERF2Q15554 542 aa9.42□□□□□ -0.9
LAMA3-210ENST00000588770 CCDC184Q52MB2 194 aa9.42□□□□□ -0.9
LAMA3-210ENST00000588770 CAVIN1Q6NZI2 390 aaKnown RBP9.42□□□□□ -0.9
LAMA3-210ENST00000588770 AK7Q96M32 723 aa9.42□□□□□ -0.9
LAMA3-210ENST00000588770 KDM2AQ9Y2K7 1162 aa9.42□□□□□ -0.9
LAMA3-210ENST00000588770 CCNB3Q8WWL7 1395 aa9.42□□□□□ -0.9
LAMA3-210ENST00000588770 HMGB1P1B2RPK0 211 aaPredicted RBP9.42□□□□□ -0.9
LAMA3-210ENST00000588770 ZRSR1Q15695 479 aaKnown RBP9.42□□□□□ -0.9
LAMA3-210ENST00000588770 CXorf56Q9H5V9 222 aa9.42□□□□□ -0.9
LAMA3-210ENST00000588770 MAPK8IP3Q9UPT6 1336 aa9.42□□□□□ -0.9
LAMA3-210ENST00000588770 CPSF2Q9P2I0 782 aaKnown RBP9.42□□□□□ -0.9
LAMA3-210ENST00000588770 RAB3GAP2Q9H2M9 1393 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 PLEKHD1A6NEE1 506 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 NOLC1Q14978 699 aaKnown RBP eCLIP9.41□□□□□ -0.9
LAMA3-210ENST00000588770 C8orf34Q49A92 452 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 CDCA8Q53HL2 280 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 LEKR1Q6ZMV7 388 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 CCDC191Q8NCU4 936 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 TBC1D2Q9BYX2 928 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 RDXP35241 583 aaKnown RBP9.41□□□□□ -0.9
LAMA3-210ENST00000588770 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
LAMA3-210ENST00000588770 PRDM16Q9HAZ2 1276 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 ZCCHC6Q5VYS8 1495 aaKnown RBP9.41□□□□□ -0.9
LAMA3-210ENST00000588770 RAD51AP2Q09MP3 1159 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 RNF214Q8ND24 703 aa9.41□□□□□ -0.9
LAMA3-210ENST00000588770 SYAP1Q96A49 352 aaPredicted RBP9.41□□□□□ -0.9
LAMA3-210ENST00000588770 CCDC97Q96F63 343 aaPredicted RBP9.41□□□□□ -0.9
LAMA3-210ENST00000588770 CAPN2P17655 700 aa9.4□□□□□ -0.9
LAMA3-210ENST00000588770 TTLL5Q6EMB2 1281 aa9.4□□□□□ -0.9
LAMA3-210ENST00000588770 DRC7Q8IY82 874 aa9.4□□□□□ -0.9
LAMA3-210ENST00000588770 FAM212AQ96EL1 285 aa9.4□□□□□ -0.9
LAMA3-210ENST00000588770 HNRNPH2P55795 449 aaKnown RBP9.4□□□□□ -0.9
LAMA3-210ENST00000588770 PDE3BQ13370 1112 aa9.4□□□□□ -0.9
LAMA3-210ENST00000588770 RRP7BPQ9NSQ0 103 aa9.4□□□□□ -0.9
LAMA3-210ENST00000588770 MNAT1P51948 309 aa9.39□□□□□ -0.91
LAMA3-210ENST00000588770 GAS2L3Q86XJ1 694 aa9.39□□□□□ -0.91
LAMA3-210ENST00000588770 DNAAF4Q8WXU2 420 aa9.39□□□□□ -0.91
LAMA3-210ENST00000588770 TPM1P09493 284 aa9.39□□□□□ -0.91
LAMA3-210ENST00000588770 CCDC112Q8NEF3 446 aa9.39□□□□□ -0.91
LAMA3-210ENST00000588770 TMX4Q9H1E5 349 aaPredicted RBP9.39□□□□□ -0.91
LAMA3-210ENST00000588770 CCP110O43303 1012 aa9.39□□□□□ -0.91
LAMA3-210ENST00000588770 SETSIPP0DME0 302 aa9.39□□□□□ -0.91
LAMA3-210ENST00000588770 SART3Q15020 963 aaKnown RBP9.38□□□□□ -0.91
LAMA3-210ENST00000588770 NOC3LQ8WTT2 800 aaKnown RBP9.38□□□□□ -0.91
LAMA3-210ENST00000588770 RNF123Q5XPI4 1314 aa9.38□□□□□ -0.91
LAMA3-210ENST00000588770 PPP1R12AO14974 1030 aaPredicted RBP9.38□□□□□ -0.91
LAMA3-210ENST00000588770 IPO7O95373 1038 aaKnown RBP9.38□□□□□ -0.91
LAMA3-210ENST00000588770 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
LAMA3-210ENST00000588770 AP1ARQ63HQ0 302 aa9.38□□□□□ -0.91
LAMA3-210ENST00000588770 KRBA2Q6ZNG9 492 aa9.38□□□□□ -0.91
LAMA3-210ENST00000588770 NEUROD2Q15784 382 aa9.38□□□□□ -0.91
LAMA3-210ENST00000588770 IRF6O14896 467 aa9.38□□□□□ -0.91
LAMA3-210ENST00000588770 RABEP1Q15276 862 aa9.38□□□□□ -0.91
LAMA3-210ENST00000588770 OTUD6BQ8N6M0 293 aa9.37□□□□□ -0.91
LAMA3-210ENST00000588770 RSF1Q96T23 1441 aaPredicted RBP9.37□□□□□ -0.91
LAMA3-210ENST00000588770 ZKSCAN8Q15776 578 aaPredicted RBP9.37□□□□□ -0.91
LAMA3-210ENST00000588770 TULP2O00295 520 aa9.37□□□□□ -0.91
LAMA3-210ENST00000588770 E2F4Q16254 413 aa9.37□□□□□ -0.91
LAMA3-210ENST00000588770 NBPF3Q9H094 633 aa9.37□□□□□ -0.91
LAMA3-210ENST00000588770 KIF16BQ96L93 1317 aa9.37□□□□□ -0.91
LAMA3-210ENST00000588770 SLFN14P0C7P3 912 aa9.37□□□□□ -0.91
LAMA3-210ENST00000588770 ARGLU1Q9NWB6 273 aaPredicted RBP9.37□□□□□ -0.91
LAMA3-210ENST00000588770 CIZ1Q9ULV3 898 aaPredicted RBP9.37□□□□□ -0.91
LAMA3-210ENST00000588770 ARID3CA6NKF2 412 aa9.36□□□□□ -0.91
LAMA3-210ENST00000588770 KIF3CO14782 793 aa9.36□□□□□ -0.91
LAMA3-210ENST00000588770 NEBLO76041 1014 aa9.36□□□□□ -0.91
LAMA3-210ENST00000588770 TNPO1Q92973 898 aaKnown RBP9.36□□□□□ -0.91
LAMA3-210ENST00000588770 BMS1Q14692 1282 aaKnown RBP9.36□□□□□ -0.91
LAMA3-210ENST00000588770 MCTP1Q6DN14 999 aa9.36□□□□□ -0.91
LAMA3-210ENST00000588770 IRAK4Q9NWZ3 460 aa9.36□□□□□ -0.91
LAMA3-210ENST00000588770 LRRFIP2Q9Y608 721 aaKnown RBP9.36□□□□□ -0.91
LAMA3-210ENST00000588770 SETD5Q9C0A6 1442 aa9.36□□□□□ -0.91
LAMA3-210ENST00000588770 NCAPD3P42695 1498 aa9.35□□□□□ -0.91
LAMA3-210ENST00000588770 POLR3GO15318 223 aaPredicted RBP9.35□□□□□ -0.91
LAMA3-210ENST00000588770 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
LAMA3-210ENST00000588770 MED4Q9NPJ6 270 aa9.35□□□□□ -0.91
LAMA3-210ENST00000588770 TMCO5BA8MYB1 307 aa9.35□□□□□ -0.91
LAMA3-210ENST00000588770 MYO1CO00159 1063 aa9.35□□□□□ -0.91
LAMA3-210ENST00000588770 RIOK3O14730 519 aaKnown RBP9.35□□□□□ -0.91
LAMA3-210ENST00000588770 IPO8O15397 1037 aaKnown RBP9.35□□□□□ -0.91
LAMA3-210ENST00000588770 POLD1P28340 1107 aa9.35□□□□□ -0.91
LAMA3-210ENST00000588770 NAP1L1P55209 391 aaKnown RBP9.35□□□□□ -0.91
LAMA3-210ENST00000588770 NUCB2P80303 420 aa9.35□□□□□ -0.91
LAMA3-210ENST00000588770 DNAJC21Q5F1R6 531 aaKnown RBP9.35□□□□□ -0.91
LAMA3-210ENST00000588770 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
LAMA3-210ENST00000588770 CCDC196A0A1B0GTZ2 297 aa9.35□□□□□ -0.91
LAMA3-210ENST00000588770 NBPF10Q6P3W6 841 aaKnown RBP9.35□□□□□ -0.91
LAMA3-210ENST00000588770 SIRT1Q96EB6 747 aa9.35□□□□□ -0.91
LAMA3-210ENST00000588770 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
LAMA3-210ENST00000588770 KLHL40Q2TBA0 621 aa9.34□□□□□ -0.91
LAMA3-210ENST00000588770 RRP12Q5JTH9 1297 aaKnown RBP9.34□□□□□ -0.91
LAMA3-210ENST00000588770 C22orf23Q9BZE7 217 aa9.34□□□□□ -0.91
LAMA3-210ENST00000588770 WDR97A6NE52 1622 aa9.34□□□□□ -0.91
LAMA3-210ENST00000588770 TRDNQ13061 729 aa9.34□□□□□ -0.91
LAMA3-210ENST00000588770 IFT57Q9NWB7 429 aa9.34□□□□□ -0.91
LAMA3-210ENST00000588770 ZNF397Q8NF99 534 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms