RNA–Protein interactions for RNA: ENST00000588631.5

PIK3C3-209, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 4

Gene PIK3C3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-209ENST00000588631 CTC1Q2NKJ3 1217 aa9.79□□□□□ -0.84
PIK3C3-209ENST00000588631 TREML4Q6UXN2 200 aa9.79□□□□□ -0.84
PIK3C3-209ENST00000588631 CYP4X1Q8N118 509 aa9.79□□□□□ -0.84
PIK3C3-209ENST00000588631 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
PIK3C3-209ENST00000588631 AXIN1O15169 862 aa9.76□□□□□ -0.85
PIK3C3-209ENST00000588631 GPIHBP1Q8IV16 184 aa9.76□□□□□ -0.85
PIK3C3-209ENST00000588631 MMP16P51512 607 aa9.75□□□□□ -0.85
PIK3C3-209ENST00000588631 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
PIK3C3-209ENST00000588631 GMPR2Q9P2T1 348 aaKnown RBP9.75□□□□□ -0.85
PIK3C3-209ENST00000588631 WNT7AO00755 349 aa9.74□□□□□ -0.85
PIK3C3-209ENST00000588631 CD46P15529 392 aa9.74□□□□□ -0.85
PIK3C3-209ENST00000588631 ZBTB24O43167 697 aaPredicted RBP9.73□□□□□ -0.85
PIK3C3-209ENST00000588631 TRIM32Q13049 653 aa9.73□□□□□ -0.85
PIK3C3-209ENST00000588631 Q3C1V9 767 aa9.72□□□□□ -0.85
PIK3C3-209ENST00000588631 SMPD1P17405 629 aa9.71□□□□□ -0.86
PIK3C3-209ENST00000588631 TTC24A2A3L6 582 aaPredicted RBP9.7□□□□□ -0.86
PIK3C3-209ENST00000588631 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
PIK3C3-209ENST00000588631 DXOO77932 396 aaKnown RBP9.7□□□□□ -0.86
PIK3C3-209ENST00000588631 SNIP1Q8TAD8 396 aaKnown RBP9.7□□□□□ -0.86
PIK3C3-209ENST00000588631 MAP2K5Q13163 448 aa9.69□□□□□ -0.86
PIK3C3-209ENST00000588631 NFX1Q12986 1120 aaKnown RBP9.68□□□□□ -0.86
PIK3C3-209ENST00000588631 MRGPRX2Q96LB1 330 aa9.68□□□□□ -0.86
PIK3C3-209ENST00000588631 USB1Q9BQ65 265 aaKnown RBP9.68□□□□□ -0.86
PIK3C3-209ENST00000588631 KDM4AO75164 1064 aa9.67□□□□□ -0.86
PIK3C3-209ENST00000588631 WFS1O76024 890 aa9.67□□□□□ -0.86
PIK3C3-209ENST00000588631 J3QL48 77 aa9.65□□□□□ -0.86
PIK3C3-209ENST00000588631 USP46P62068 366 aa9.65□□□□□ -0.86
PIK3C3-209ENST00000588631 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
PIK3C3-209ENST00000588631 HLA-CQ95604 372 aa9.65□□□□□ -0.86
PIK3C3-209ENST00000588631 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
PIK3C3-209ENST00000588631 ATP13A2Q9NQ11 1180 aa9.65□□□□□ -0.86
PIK3C3-209ENST00000588631 HOXA2O43364 376 aa9.64□□□□□ -0.87
PIK3C3-209ENST00000588631 IRF6O14896 467 aa9.63□□□□□ -0.87
PIK3C3-209ENST00000588631 WIPF1O43516 503 aa9.63□□□□□ -0.87
PIK3C3-209ENST00000588631 TULP1O00294 542 aaPredicted RBP9.62□□□□□ -0.87
PIK3C3-209ENST00000588631 SKOR1P84550 965 aa9.62□□□□□ -0.87
PIK3C3-209ENST00000588631 LCE2CQ5TA81 110 aa9.62□□□□□ -0.87
PIK3C3-209ENST00000588631 TRIM47Q96LD4 638 aa9.62□□□□□ -0.87
PIK3C3-209ENST00000588631 SNRPBP14678 240 aaKnown RBP9.61□□□□□ -0.87
PIK3C3-209ENST00000588631 WNT7BP56706 349 aa9.61□□□□□ -0.87
PIK3C3-209ENST00000588631 MDM2Q00987 491 aaPredicted RBP9.61□□□□□ -0.87
PIK3C3-209ENST00000588631 HPS1Q92902 700 aa9.61□□□□□ -0.87
PIK3C3-209ENST00000588631 RC3H1Q5TC82 1133 aaKnown RBP9.59□□□□□ -0.87
PIK3C3-209ENST00000588631 SENP2Q9HC62 589 aa9.59□□□□□ -0.87
PIK3C3-209ENST00000588631 MINK1Q8N4C8 1332 aaPredicted RBP9.58□□□□□ -0.88
PIK3C3-209ENST00000588631 JUNDP17535 347 aa9.58□□□□□ -0.88
PIK3C3-209ENST00000588631 GUCA2AQ02747 115 aa9.58□□□□□ -0.88
PIK3C3-209ENST00000588631 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
PIK3C3-209ENST00000588631 CCDC102AQ96A19 550 aa9.57□□□□□ -0.88
PIK3C3-209ENST00000588631 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
PIK3C3-209ENST00000588631 STK17AQ9UEE5 414 aa9.56□□□□□ -0.88
PIK3C3-209ENST00000588631 TERTO14746 1132 aaKnown RBP9.55□□□□□ -0.88
PIK3C3-209ENST00000588631 KIFC2Q96AC6 838 aa9.55□□□□□ -0.88
PIK3C3-209ENST00000588631 GPCPD1Q9NPB8 672 aa9.55□□□□□ -0.88
PIK3C3-209ENST00000588631 INSM1Q01101 510 aaPredicted RBP9.54□□□□□ -0.88
PIK3C3-209ENST00000588631 RETREG3Q86VR2 466 aa9.54□□□□□ -0.88
PIK3C3-209ENST00000588631 SYMPKQ92797 1274 aaKnown RBP9.54□□□□□ -0.88
PIK3C3-209ENST00000588631 SIAH2O43255 324 aa9.53□□□□□ -0.88
PIK3C3-209ENST00000588631 CLCN1P35523 988 aa9.53□□□□□ -0.88
PIK3C3-209ENST00000588631 NUDT12Q9BQG2 462 aa9.52□□□□□ -0.89
PIK3C3-209ENST00000588631 ALDH1A1P00352 501 aa9.51□□□□□ -0.89
PIK3C3-209ENST00000588631 PTCRAQ6ISU1 281 aaPredicted RBP9.51□□□□□ -0.89
PIK3C3-209ENST00000588631 ZC3H15Q8WU90 426 aaKnown RBP9.49□□□□□ -0.89
PIK3C3-209ENST00000588631 PCDHGC3Q9UN70 934 aa9.49□□□□□ -0.89
PIK3C3-209ENST00000588631 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
PIK3C3-209ENST00000588631 EHBP1Q8NDI1 1231 aa9.48□□□□□ -0.89
PIK3C3-209ENST00000588631 FDX1P10109 184 aa9.47□□□□□ -0.89
PIK3C3-209ENST00000588631 TRIM46Q7Z4K8 759 aa9.47□□□□□ -0.89
PIK3C3-209ENST00000588631 CCNYL3P0C7X3 344 aa9.46□□□□□ -0.9
PIK3C3-209ENST00000588631 SH3BP2P78314 561 aa9.46□□□□□ -0.9
PIK3C3-209ENST00000588631 BMP1P13497 986 aa9.45□□□□□ -0.9
PIK3C3-209ENST00000588631 MS4A1P11836 297 aa9.44□□□□□ -0.9
PIK3C3-209ENST00000588631 PTPRNQ16849 979 aa9.44□□□□□ -0.9
PIK3C3-209ENST00000588631 C6orf229H3BNL8 230 aa9.43□□□□□ -0.9
PIK3C3-209ENST00000588631 CAPN5O15484 640 aaPredicted RBP9.43□□□□□ -0.9
PIK3C3-209ENST00000588631 UNC93B1Q9H1C4 597 aa9.43□□□□□ -0.9
PIK3C3-209ENST00000588631 NXF1Q9UBU9 619 aaKnown RBP9.43□□□□□ -0.9
PIK3C3-209ENST00000588631 SPIRE2Q8WWL2 714 aa9.42□□□□□ -0.9
PIK3C3-209ENST00000588631 WASF2Q9Y6W5 498 aa9.42□□□□□ -0.9
PIK3C3-209ENST00000588631 NPAS3Q8IXF0 933 aa9.41□□□□□ -0.9
PIK3C3-209ENST00000588631 EVA1BQ9NVM1 165 aa9.41□□□□□ -0.9
PIK3C3-209ENST00000588631 TLL2Q9Y6L7 1015 aa9.41□□□□□ -0.9
PIK3C3-209ENST00000588631 ZMYND10O75800 440 aa9.4□□□□□ -0.9
PIK3C3-209ENST00000588631 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
PIK3C3-209ENST00000588631 NDUFV2P19404 249 aa9.39□□□□□ -0.91
PIK3C3-209ENST00000588631 LORP23490 312 aaPredicted RBP9.39□□□□□ -0.91
PIK3C3-209ENST00000588631 SSTR3P32745 418 aaPredicted RBP9.39□□□□□ -0.91
PIK3C3-209ENST00000588631 KRI1Q8N9T8 703 aaKnown RBP9.39□□□□□ -0.91
PIK3C3-209ENST00000588631 MOXD2PA6NHM9 499 aa9.38□□□□□ -0.91
PIK3C3-209ENST00000588631 KCNH2Q12809 1159 aa9.38□□□□□ -0.91
PIK3C3-209ENST00000588631 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
PIK3C3-209ENST00000588631 DESI1Q6ICB0 168 aa9.38□□□□□ -0.91
PIK3C3-209ENST00000588631 MPNDQ8N594 471 aa9.38□□□□□ -0.91
PIK3C3-209ENST00000588631 H3BM21 787 aa9.37□□□□□ -0.91
PIK3C3-209ENST00000588631 GMPRP36959 345 aa9.37□□□□□ -0.91
PIK3C3-209ENST00000588631 ZNF511Q8NB15 262 aa9.37□□□□□ -0.91
PIK3C3-209ENST00000588631 PRR7Q8TB68 274 aa9.37□□□□□ -0.91
PIK3C3-209ENST00000588631 BAP1Q92560 729 aa9.37□□□□□ -0.91
PIK3C3-209ENST00000588631 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
PIK3C3-209ENST00000588631 VARSP26640 1264 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms