RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
KDM4B-206ENST00000588361 MAP3K4Q9Y6R4 1608 aa19.76■□□□□ 0.75
KDM4B-206ENST00000588361 ARXQ96QS3 562 aa19.76■□□□□ 0.75
KDM4B-206ENST00000588361 INO80Q9ULG1 1556 aaPredicted RBP19.76■□□□□ 0.75
KDM4B-206ENST00000588361 U2AF1L5P0DN76 240 aaPredicted RBP19.76■□□□□ 0.75
KDM4B-206ENST00000588361 U2AF1Q01081 240 aaKnown RBP eCLIP19.76■□□□□ 0.75
KDM4B-206ENST00000588361 ARAP3Q8WWN8 1544 aa19.74■□□□□ 0.75
KDM4B-206ENST00000588361 RUNDC1Q96C34 613 aa19.74■□□□□ 0.75
KDM4B-206ENST00000588361 VWDEQ8N2E2 1590 aa19.74■□□□□ 0.75
KDM4B-206ENST00000588361 NPATQ14207 1427 aa19.73■□□□□ 0.75
KDM4B-206ENST00000588361 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
KDM4B-206ENST00000588361 ABCA9Q8IUA7 1624 aa19.72■□□□□ 0.75
KDM4B-206ENST00000588361 MYOM2P54296 1465 aa19.72■□□□□ 0.75
KDM4B-206ENST00000588361 CGNL1Q0VF96 1302 aa19.72■□□□□ 0.75
KDM4B-206ENST00000588361 U2SURPO15042 1029 aaKnown RBP19.71■□□□□ 0.75
KDM4B-206ENST00000588361 EFCAB6Q5THR3 1501 aa19.71■□□□□ 0.75
KDM4B-206ENST00000588361 SRPK2P78362 688 aaKnown RBP19.71■□□□□ 0.75
KDM4B-206ENST00000588361 CFAP53Q96M91 514 aa19.71■□□□□ 0.75
KDM4B-206ENST00000588361 CD109Q6YHK3 1445 aa19.7■□□□□ 0.74
KDM4B-206ENST00000588361 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
KDM4B-206ENST00000588361 PPRC1Q5VV67 1664 aaKnown RBP19.7■□□□□ 0.74
KDM4B-206ENST00000588361 MROH2AA6NES4 1674 aa19.69■□□□□ 0.74
KDM4B-206ENST00000588361 RLBP1P12271 317 aa19.69■□□□□ 0.74
KDM4B-206ENST00000588361 GGNBP2Q9H3C7 697 aa19.69■□□□□ 0.74
KDM4B-206ENST00000588361 KIF1BO60333 1816 aa19.69■□□□□ 0.74
KDM4B-206ENST00000588361 ZNF518AQ6AHZ1 1483 aa19.69■□□□□ 0.74
KDM4B-206ENST00000588361 RARSP54136 660 aaKnown RBP19.69■□□□□ 0.74
KDM4B-206ENST00000588361 PDE3AQ14432 1141 aa19.68■□□□□ 0.74
KDM4B-206ENST00000588361 TSR2Q969E8 191 aaKnown RBP19.67■□□□□ 0.74
KDM4B-206ENST00000588361 EVC2Q86UK5 1308 aa19.67■□□□□ 0.74
KDM4B-206ENST00000588361 KIDINS220Q9ULH0 1771 aa19.67■□□□□ 0.74
KDM4B-206ENST00000588361 SEC24BO95487 1268 aa19.67■□□□□ 0.74
KDM4B-206ENST00000588361 IDI1Q13907 227 aa19.66■□□□□ 0.74
KDM4B-206ENST00000588361 POGKQ9P215 609 aa19.66■□□□□ 0.74
KDM4B-206ENST00000588361 MINK1Q8N4C8 1332 aaPredicted RBP19.66■□□□□ 0.74
KDM4B-206ENST00000588361 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
KDM4B-206ENST00000588361 RSPH6AQ9H0K4 717 aa19.65■□□□□ 0.74
KDM4B-206ENST00000588361 PCDHB15Q9Y5E8 787 aa19.65■□□□□ 0.74
KDM4B-206ENST00000588361 SBNO2Q9Y2G9 1366 aa19.64■□□□□ 0.73
KDM4B-206ENST00000588361 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
KDM4B-206ENST00000588361 FAM43AQ8N2R8 423 aa19.63■□□□□ 0.73
KDM4B-206ENST00000588361 NGEFQ8N5V2 710 aa19.63■□□□□ 0.73
KDM4B-206ENST00000588361 KIAA1210Q9ULL0 1709 aa19.63■□□□□ 0.73
KDM4B-206ENST00000588361 RRAGDQ9NQL2 400 aaPredicted RBP19.62■□□□□ 0.73
KDM4B-206ENST00000588361 NRXN1Q9ULB1 1477 aa19.61■□□□□ 0.73
KDM4B-206ENST00000588361 ADGRB3O60242 1522 aa19.6■□□□□ 0.73
KDM4B-206ENST00000588361 FBLN1P23142 703 aa19.6■□□□□ 0.73
KDM4B-206ENST00000588361 SLKQ9H2G2 1235 aaPredicted RBP19.6■□□□□ 0.73
KDM4B-206ENST00000588361 POGZQ7Z3K3 1410 aa19.59■□□□□ 0.73
KDM4B-206ENST00000588361 WDR63Q8IWG1 891 aa19.59■□□□□ 0.73
KDM4B-206ENST00000588361 FTSJ3Q8IY81 847 aaKnown RBP19.59■□□□□ 0.73
KDM4B-206ENST00000588361 RPGRIP1LQ68CZ1 1315 aa19.59■□□□□ 0.73
KDM4B-206ENST00000588361 PRAM1Q96QH2 718 aa19.58■□□□□ 0.73
KDM4B-206ENST00000588361 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.72
KDM4B-206ENST00000588361 FBXO31Q5XUX0 539 aaPredicted RBP19.57■□□□□ 0.72
KDM4B-206ENST00000588361 STAG3Q9UJ98 1225 aa19.57■□□□□ 0.72
KDM4B-206ENST00000588361 EXOSC9Q06265 439 aaKnown RBP19.57■□□□□ 0.72
KDM4B-206ENST00000588361 PDZRN3Q9UPQ7 1066 aa19.57■□□□□ 0.72
KDM4B-206ENST00000588361 SMC4Q9NTJ3 1288 aa19.56■□□□□ 0.72
KDM4B-206ENST00000588361 ADGRB1O14514 1584 aa19.55■□□□□ 0.72
KDM4B-206ENST00000588361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.55■□□□□ 0.72
KDM4B-206ENST00000588361 PKNOX2Q96KN3 472 aa19.55■□□□□ 0.72
KDM4B-206ENST00000588361 ANKRD36BQ8N2N9 1353 aa19.55■□□□□ 0.72
KDM4B-206ENST00000588361 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
KDM4B-206ENST00000588361 PMFBP1Q8TBY8 1022 aa19.54■□□□□ 0.72
KDM4B-206ENST00000588361 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
KDM4B-206ENST00000588361 QRICH2Q9H0J4 1663 aa19.54■□□□□ 0.72
KDM4B-206ENST00000588361 FRMPD1Q5SYB0 1578 aa19.54■□□□□ 0.72
KDM4B-206ENST00000588361 LMTK2Q8IWU2 1503 aa19.54■□□□□ 0.72
KDM4B-206ENST00000588361 A0A1W2PP64 1363 aa19.53■□□□□ 0.72
KDM4B-206ENST00000588361 IFT172Q9UG01 1749 aa19.53■□□□□ 0.72
KDM4B-206ENST00000588361 USP19O94966 1318 aa19.53■□□□□ 0.72
KDM4B-206ENST00000588361 NEURL4Q96JN8 1562 aa19.53■□□□□ 0.72
KDM4B-206ENST00000588361 SPRYD3Q8NCJ5 442 aa19.52■□□□□ 0.72
KDM4B-206ENST00000588361 FYB1O15117 783 aa19.52■□□□□ 0.72
KDM4B-206ENST00000588361 TMPOP42166 694 aaKnown RBP19.52■□□□□ 0.72
KDM4B-206ENST00000588361 ZKSCAN2Q63HK3 967 aa19.52■□□□□ 0.72
KDM4B-206ENST00000588361 ITPRIPQ8IWB1 547 aa19.52■□□□□ 0.72
KDM4B-206ENST00000588361 ABCC3O15438 1527 aa19.52■□□□□ 0.71
KDM4B-206ENST00000588361 DZIP1LQ8IYY4 767 aaKnown RBP19.51■□□□□ 0.71
KDM4B-206ENST00000588361 RIPK4P57078 832 aa19.51■□□□□ 0.71
KDM4B-206ENST00000588361 RWDD1Q9H446 243 aaPredicted RBP19.51■□□□□ 0.71
KDM4B-206ENST00000588361 SETBP1Q9Y6X0 1596 aa19.51■□□□□ 0.71
KDM4B-206ENST00000588361 MLH3Q9UHC1 1453 aa19.51■□□□□ 0.71
KDM4B-206ENST00000588361 CABP1Q9NZU7 370 aa19.51■□□□□ 0.71
KDM4B-206ENST00000588361 MVPQ14764 893 aaKnown RBP19.5■□□□□ 0.71
KDM4B-206ENST00000588361 SSH1Q8WYL5 1049 aa19.5■□□□□ 0.71
KDM4B-206ENST00000588361 TULP4Q9NRJ4 1543 aa19.49■□□□□ 0.71
KDM4B-206ENST00000588361 CCDC27Q2M243 656 aa19.49■□□□□ 0.71
KDM4B-206ENST00000588361 VSIG10Q8N0Z9 540 aa19.49■□□□□ 0.71
KDM4B-206ENST00000588361 TERF2IPQ9NYB0 399 aa19.49■□□□□ 0.71
KDM4B-206ENST00000588361 MYO3AQ8NEV4 1616 aa19.49■□□□□ 0.71
KDM4B-206ENST00000588361 SHPRHQ149N8 1683 aa19.49■□□□□ 0.71
KDM4B-206ENST00000588361 NAP1L5Q96NT1 182 aaPredicted RBP19.49■□□□□ 0.71
KDM4B-206ENST00000588361 TRIM35Q9UPQ4 493 aa19.49■□□□□ 0.71
KDM4B-206ENST00000588361 NINLQ9Y2I6 1382 aa19.48■□□□□ 0.71
KDM4B-206ENST00000588361 MLECQ14165 292 aa19.48■□□□□ 0.71
KDM4B-206ENST00000588361 GZF1Q9H116 711 aaPredicted RBP19.48■□□□□ 0.71
KDM4B-206ENST00000588361 CDK19Q9BWU1 502 aa19.48■□□□□ 0.71
KDM4B-206ENST00000588361 PPLO60437 1756 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 1119.1 ms