RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 EVC2Q86UK5 1308 aa14.42□□□□□ -0.1
CHMP1B-202ENST00000588284 MYO3AQ8NEV4 1616 aa14.42□□□□□ -0.1
CHMP1B-202ENST00000588284 CCER2I3L3R5 266 aa14.42□□□□□ -0.1
CHMP1B-202ENST00000588284 CEP170BQ9Y4F5 1589 aaPredicted RBP14.42□□□□□ -0.1
CHMP1B-202ENST00000588284 PRAM1Q96QH2 718 aa14.4□□□□□ -0.1
CHMP1B-202ENST00000588284 DLC1Q96QB1 1528 aa14.39□□□□□ -0.11
CHMP1B-202ENST00000588284 METP08581 1390 aa14.38□□□□□ -0.11
CHMP1B-202ENST00000588284 PANK3Q9H999 370 aa14.38□□□□□ -0.11
CHMP1B-202ENST00000588284 ADAMTS13Q76LX8 1427 aa14.38□□□□□ -0.11
CHMP1B-202ENST00000588284 ASXL1Q8IXJ9 1541 aa14.37□□□□□ -0.11
CHMP1B-202ENST00000588284 SLC26A8Q96RN1 970 aa14.37□□□□□ -0.11
CHMP1B-202ENST00000588284 MED14O60244 1454 aa14.37□□□□□ -0.11
CHMP1B-202ENST00000588284 PIK3R4Q99570 1358 aa14.36□□□□□ -0.11
CHMP1B-202ENST00000588284 FAM135BQ49AJ0 1406 aa14.36□□□□□ -0.11
CHMP1B-202ENST00000588284 CAPN15O75808 1086 aa14.36□□□□□ -0.11
CHMP1B-202ENST00000588284 PRKRIP1Q9H875 184 aaPredicted RBP14.36□□□□□ -0.11
CHMP1B-202ENST00000588284 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
CHMP1B-202ENST00000588284 ZNF142P52746 1687 aaPredicted RBP14.36□□□□□ -0.11
CHMP1B-202ENST00000588284 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
CHMP1B-202ENST00000588284 NRXN3Q9Y4C0 1643 aa14.35□□□□□ -0.11
CHMP1B-202ENST00000588284 PER1O15534 1290 aaPredicted RBP14.35□□□□□ -0.11
CHMP1B-202ENST00000588284 ARHGEF28Q8N1W1 1705 aaKnown RBP14.35□□□□□ -0.11
CHMP1B-202ENST00000588284 TECPR2O15040 1411 aa14.34□□□□□ -0.11
CHMP1B-202ENST00000588284 SAFB2Q14151 953 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHMP1B-202ENST00000588284 RALBP1Q15311 655 aa14.34□□□□□ -0.11
CHMP1B-202ENST00000588284 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
CHMP1B-202ENST00000588284 KNSTRNQ9Y448 316 aa14.34□□□□□ -0.11
CHMP1B-202ENST00000588284 DIP2AQ14689 1571 aa14.34□□□□□ -0.11
CHMP1B-202ENST00000588284 QRICH2Q9H0J4 1663 aa14.33□□□□□ -0.11
CHMP1B-202ENST00000588284 SETD1AO15047 1707 aaKnown RBP14.33□□□□□ -0.12
CHMP1B-202ENST00000588284 SRPK2P78362 688 aaKnown RBP14.33□□□□□ -0.12
CHMP1B-202ENST00000588284 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.12
CHMP1B-202ENST00000588284 AMOTL2Q9Y2J4 779 aa14.33□□□□□ -0.12
CHMP1B-202ENST00000588284 MINK1Q8N4C8 1332 aaPredicted RBP14.33□□□□□ -0.12
CHMP1B-202ENST00000588284 TMC1Q8TDI8 760 aa14.31□□□□□ -0.12
CHMP1B-202ENST00000588284 CDK19Q9BWU1 502 aa14.31□□□□□ -0.12
CHMP1B-202ENST00000588284 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
CHMP1B-202ENST00000588284 ATAD2Q6PL18 1390 aa14.31□□□□□ -0.12
CHMP1B-202ENST00000588284 NINLQ9Y2I6 1382 aa14.31□□□□□ -0.12
CHMP1B-202ENST00000588284 LMTK3Q96Q04 1460 aa14.31□□□□□ -0.12
CHMP1B-202ENST00000588284 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
CHMP1B-202ENST00000588284 WASLO00401 505 aaPredicted RBP14.29□□□□□ -0.12
CHMP1B-202ENST00000588284 NPHP4O75161 1426 aaPredicted RBP14.29□□□□□ -0.12
CHMP1B-202ENST00000588284 KNDC1Q76NI1 1749 aa14.29□□□□□ -0.12
CHMP1B-202ENST00000588284 SLC12A5Q9H2X9 1139 aa14.28□□□□□ -0.12
CHMP1B-202ENST00000588284 TERF2IPQ9NYB0 399 aa14.28□□□□□ -0.12
CHMP1B-202ENST00000588284 CPS1P31327 1500 aa14.27□□□□□ -0.12
CHMP1B-202ENST00000588284 NPC1L1Q9UHC9 1359 aa14.27□□□□□ -0.12
CHMP1B-202ENST00000588284 PLEKHH1Q9ULM0 1364 aa14.27□□□□□ -0.12
CHMP1B-202ENST00000588284 NCKAP5LQ9HCH0 1330 aa14.27□□□□□ -0.12
CHMP1B-202ENST00000588284 PTPRUQ92729 1446 aa14.26□□□□□ -0.13
CHMP1B-202ENST00000588284 ROBO2Q9HCK4 1378 aa14.26□□□□□ -0.13
CHMP1B-202ENST00000588284 TULP4Q9NRJ4 1543 aa14.25□□□□□ -0.13
CHMP1B-202ENST00000588284 KCNA6P17658 529 aa14.25□□□□□ -0.13
CHMP1B-202ENST00000588284 HDGFL2Q7Z4V5 671 aaPredicted RBP14.25□□□□□ -0.13
CHMP1B-202ENST00000588284 PTCH1Q13635 1447 aa14.24□□□□□ -0.13
CHMP1B-202ENST00000588284 MYBBP1AQ9BQG0 1328 aaKnown RBP14.24□□□□□ -0.13
CHMP1B-202ENST00000588284 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
CHMP1B-202ENST00000588284 ANKRD36BQ8N2N9 1353 aa14.23□□□□□ -0.13
CHMP1B-202ENST00000588284 CNGB1Q14028 1251 aaPredicted RBP14.23□□□□□ -0.13
CHMP1B-202ENST00000588284 CC2D1BQ5T0F9 858 aaKnown RBP14.23□□□□□ -0.13
CHMP1B-202ENST00000588284 CARD14Q9BXL6 1004 aa14.23□□□□□ -0.13
CHMP1B-202ENST00000588284 MRS2Q9HD23 443 aa14.23□□□□□ -0.13
CHMP1B-202ENST00000588284 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
CHMP1B-202ENST00000588284 PARD3Q8TEW0 1356 aa14.22□□□□□ -0.13
CHMP1B-202ENST00000588284 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
CHMP1B-202ENST00000588284 NUDT16Q96DE0 195 aaKnown RBP14.22□□□□□ -0.13
CHMP1B-202ENST00000588284 CABP1Q9NZU7 370 aa14.22□□□□□ -0.13
CHMP1B-202ENST00000588284 NLRP13Q86W25 1043 aa14.21□□□□□ -0.13
CHMP1B-202ENST00000588284 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.13
CHMP1B-202ENST00000588284 CGNL1Q0VF96 1302 aa14.2□□□□□ -0.14
CHMP1B-202ENST00000588284 YTHDC1Q96MU7 727 aaKnown RBP14.2□□□□□ -0.14
CHMP1B-202ENST00000588284 BRD4O60885 1362 aaPredicted RBP14.2□□□□□ -0.14
CHMP1B-202ENST00000588284 MYOM1P52179 1685 aa14.2□□□□□ -0.14
CHMP1B-202ENST00000588284 HSPA2P54652 639 aa14.18□□□□□ -0.14
CHMP1B-202ENST00000588284 NSD2O96028 1365 aa14.18□□□□□ -0.14
CHMP1B-202ENST00000588284 XRN1Q8IZH2 1706 aaKnown RBP14.18□□□□□ -0.14
CHMP1B-202ENST00000588284 CHD2O14647 1828 aaKnown RBP14.18□□□□□ -0.14
CHMP1B-202ENST00000588284 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
CHMP1B-202ENST00000588284 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
CHMP1B-202ENST00000588284 SOCS7O14512 581 aa14.17□□□□□ -0.14
CHMP1B-202ENST00000588284 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
CHMP1B-202ENST00000588284 ADGRB2O60241 1585 aa14.17□□□□□ -0.14
CHMP1B-202ENST00000588284 ILDR2Q71H61 639 aa14.16□□□□□ -0.14
CHMP1B-202ENST00000588284 PROSER2Q86WR7 435 aaPredicted RBP14.16□□□□□ -0.14
CHMP1B-202ENST00000588284 ATP7BP35670 1465 aa14.15□□□□□ -0.14
CHMP1B-202ENST00000588284 CCDC184Q52MB2 194 aa14.15□□□□□ -0.14
CHMP1B-202ENST00000588284 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
CHMP1B-202ENST00000588284 PPIP5K1Q6PFW1 1433 aa14.15□□□□□ -0.14
CHMP1B-202ENST00000588284 A0A1W2PP64 1363 aa14.14□□□□□ -0.15
CHMP1B-202ENST00000588284 PPP2R1AP30153 589 aa14.14□□□□□ -0.15
CHMP1B-202ENST00000588284 C14orf37Q86TY3 774 aa14.13□□□□□ -0.15
CHMP1B-202ENST00000588284 FAM9BQ8IZU0 186 aa14.13□□□□□ -0.15
CHMP1B-202ENST00000588284 PNISRQ8TF01 805 aaKnown RBP14.13□□□□□ -0.15
CHMP1B-202ENST00000588284 PRR36Q9H6K5 1346 aa14.13□□□□□ -0.15
CHMP1B-202ENST00000588284 CPSF1Q10570 1443 aaKnown RBP14.12□□□□□ -0.15
CHMP1B-202ENST00000588284 ANKARQ7Z5J8 1434 aa14.12□□□□□ -0.15
CHMP1B-202ENST00000588284 NCOA3Q9Y6Q9 1424 aa14.12□□□□□ -0.15
CHMP1B-202ENST00000588284 FYB1O15117 783 aa14.11□□□□□ -0.15
CHMP1B-202ENST00000588284 USP32Q8NFA0 1604 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms