RNA–Protein interactions for RNA: ENST00000588156.5

PIK3C3-208, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-208ENST00000588156 CRIPAKQ8N1N5 446 aa12.11□□□□□ -0.47
PIK3C3-208ENST00000588156 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
PIK3C3-208ENST00000588156 Q3C1V9 767 aa12.1□□□□□ -0.47
PIK3C3-208ENST00000588156 HLA-CQ95604 372 aa12.1□□□□□ -0.47
PIK3C3-208ENST00000588156 KDM4AO75164 1064 aa12.09□□□□□ -0.47
PIK3C3-208ENST00000588156 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
PIK3C3-208ENST00000588156 GMPR2Q9P2T1 348 aaKnown RBP12.09□□□□□ -0.47
PIK3C3-208ENST00000588156 MMP16P51512 607 aa12.08□□□□□ -0.48
PIK3C3-208ENST00000588156 TRIM32Q13049 653 aa12.08□□□□□ -0.48
PIK3C3-208ENST00000588156 IRF6O14896 467 aa12.06□□□□□ -0.48
PIK3C3-208ENST00000588156 USB1Q9BQ65 265 aaKnown RBP12.06□□□□□ -0.48
PIK3C3-208ENST00000588156 WNT7AO00755 349 aa12.05□□□□□ -0.48
PIK3C3-208ENST00000588156 CTC1Q2NKJ3 1217 aa12.05□□□□□ -0.48
PIK3C3-208ENST00000588156 TREML4Q6UXN2 200 aa12.05□□□□□ -0.48
PIK3C3-208ENST00000588156 C11orf95C9JLR9 678 aaPredicted RBP12.04□□□□□ -0.48
PIK3C3-208ENST00000588156 SMPD1P17405 629 aa12.04□□□□□ -0.48
PIK3C3-208ENST00000588156 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
PIK3C3-208ENST00000588156 DXOO77932 396 aaKnown RBP12.03□□□□□ -0.48
PIK3C3-208ENST00000588156 GUCA2AQ02747 115 aa12.03□□□□□ -0.48
PIK3C3-208ENST00000588156 SNIP1Q8TAD8 396 aaKnown RBP12.03□□□□□ -0.48
PIK3C3-208ENST00000588156 MRGPRX2Q96LB1 330 aa12.03□□□□□ -0.48
PIK3C3-208ENST00000588156 J3QL48 77 aa12.02□□□□□ -0.49
PIK3C3-208ENST00000588156 SMCPP49901 116 aaPredicted RBP12.02□□□□□ -0.49
PIK3C3-208ENST00000588156 LCE2AQ5TA79 106 aaPredicted RBP12.02□□□□□ -0.49
PIK3C3-208ENST00000588156 HOXA2O43364 376 aa12.01□□□□□ -0.49
PIK3C3-208ENST00000588156 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
PIK3C3-208ENST00000588156 USP46P62068 366 aa12□□□□□ -0.49
PIK3C3-208ENST00000588156 MINK1Q8N4C8 1332 aaPredicted RBP12□□□□□ -0.49
PIK3C3-208ENST00000588156 TULP1O00294 542 aaPredicted RBP11.99□□□□□ -0.49
PIK3C3-208ENST00000588156 SYMPKQ92797 1274 aaKnown RBP11.98□□□□□ -0.49
PIK3C3-208ENST00000588156 SKOR1P84550 965 aa11.96□□□□□ -0.49
PIK3C3-208ENST00000588156 WFS1O76024 890 aa11.95□□□□□ -0.5
PIK3C3-208ENST00000588156 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
PIK3C3-208ENST00000588156 HPS1Q92902 700 aa11.95□□□□□ -0.5
PIK3C3-208ENST00000588156 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
PIK3C3-208ENST00000588156 ATP13A2Q9NQ11 1180 aa11.95□□□□□ -0.5
PIK3C3-208ENST00000588156 FAM217BQ9NTX9 383 aaPredicted RBP11.94□□□□□ -0.5
PIK3C3-208ENST00000588156 JUNDP17535 347 aa11.93□□□□□ -0.5
PIK3C3-208ENST00000588156 REPIN1Q9BWE0 567 aaKnown RBP11.93□□□□□ -0.5
PIK3C3-208ENST00000588156 SNRPBP14678 240 aaKnown RBP11.92□□□□□ -0.5
PIK3C3-208ENST00000588156 CLCN1P35523 988 aa11.92□□□□□ -0.5
PIK3C3-208ENST00000588156 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
PIK3C3-208ENST00000588156 WNT7BP56706 349 aa11.9□□□□□ -0.5
PIK3C3-208ENST00000588156 NFX1Q12986 1120 aaKnown RBP11.9□□□□□ -0.5
PIK3C3-208ENST00000588156 KRI1Q8N9T8 703 aaKnown RBP11.9□□□□□ -0.5
PIK3C3-208ENST00000588156 PTCRAQ6ISU1 281 aaPredicted RBP11.88□□□□□ -0.51
PIK3C3-208ENST00000588156 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
PIK3C3-208ENST00000588156 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
PIK3C3-208ENST00000588156 ALDH1A1P00352 501 aa11.87□□□□□ -0.51
PIK3C3-208ENST00000588156 RETREG3Q86VR2 466 aa11.87□□□□□ -0.51
PIK3C3-208ENST00000588156 FDX1P10109 184 aa11.86□□□□□ -0.51
PIK3C3-208ENST00000588156 TRIM47Q96LD4 638 aa11.86□□□□□ -0.51
PIK3C3-208ENST00000588156 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
PIK3C3-208ENST00000588156 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
PIK3C3-208ENST00000588156 SENP2Q9HC62 589 aa11.85□□□□□ -0.51
PIK3C3-208ENST00000588156 SSTR3P32745 418 aaPredicted RBP11.82□□□□□ -0.52
PIK3C3-208ENST00000588156 LCE2CQ5TA81 110 aa11.82□□□□□ -0.52
PIK3C3-208ENST00000588156 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.82□□□□□ -0.52
PIK3C3-208ENST00000588156 EHBP1Q8NDI1 1231 aa11.82□□□□□ -0.52
PIK3C3-208ENST00000588156 SIAH2O43255 324 aa11.81□□□□□ -0.52
PIK3C3-208ENST00000588156 NDUFV2P19404 249 aa11.81□□□□□ -0.52
PIK3C3-208ENST00000588156 TERTO14746 1132 aaKnown RBP11.8□□□□□ -0.52
PIK3C3-208ENST00000588156 SPIRE2Q8WWL2 714 aa11.8□□□□□ -0.52
PIK3C3-208ENST00000588156 MS4A1P11836 297 aa11.79□□□□□ -0.52
PIK3C3-208ENST00000588156 CCNYL3P0C7X3 344 aa11.78□□□□□ -0.52
PIK3C3-208ENST00000588156 SH3BP2P78314 561 aa11.78□□□□□ -0.52
PIK3C3-208ENST00000588156 KIFC2Q96AC6 838 aa11.78□□□□□ -0.52
PIK3C3-208ENST00000588156 WASF2Q9Y6W5 498 aa11.78□□□□□ -0.52
PIK3C3-208ENST00000588156 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
PIK3C3-208ENST00000588156 WIPF1O43516 503 aa11.77□□□□□ -0.53
PIK3C3-208ENST00000588156 BMP1P13497 986 aa11.77□□□□□ -0.53
PIK3C3-208ENST00000588156 LINC01559Q495D7 138 aa11.77□□□□□ -0.53
PIK3C3-208ENST00000588156 TTLL12Q14166 644 aaPredicted RBP11.76□□□□□ -0.53
PIK3C3-208ENST00000588156 UNC93B1Q9H1C4 597 aa11.75□□□□□ -0.53
PIK3C3-208ENST00000588156 CAPN5O15484 640 aaPredicted RBP11.74□□□□□ -0.53
PIK3C3-208ENST00000588156 PTPRNQ16849 979 aa11.74□□□□□ -0.53
PIK3C3-208ENST00000588156 PRR7Q8TB68 274 aa11.74□□□□□ -0.53
PIK3C3-208ENST00000588156 INSM1Q01101 510 aaPredicted RBP11.73□□□□□ -0.53
PIK3C3-208ENST00000588156 TRIM46Q7Z4K8 759 aa11.73□□□□□ -0.53
PIK3C3-208ENST00000588156 BAP1Q92560 729 aa11.73□□□□□ -0.53
PIK3C3-208ENST00000588156 EVA1BQ9NVM1 165 aa11.72□□□□□ -0.53
PIK3C3-208ENST00000588156 TLL2Q9Y6L7 1015 aa11.72□□□□□ -0.53
PIK3C3-208ENST00000588156 KCNH2Q12809 1159 aa11.71□□□□□ -0.53
PIK3C3-208ENST00000588156 GIGYF2Q6Y7W6 1299 aaKnown RBP11.71□□□□□ -0.53
PIK3C3-208ENST00000588156 BARGINQ6ZT62 677 aa11.71□□□□□ -0.53
PIK3C3-208ENST00000588156 STK17AQ9UEE5 414 aa11.71□□□□□ -0.53
PIK3C3-208ENST00000588156 MTMR2Q13614 643 aa11.7□□□□□ -0.54
PIK3C3-208ENST00000588156 ZMYND10O75800 440 aa11.68□□□□□ -0.54
PIK3C3-208ENST00000588156 AMHR2Q16671 573 aa11.68□□□□□ -0.54
PIK3C3-208ENST00000588156 BEGAINQ9BUH8 593 aa11.68□□□□□ -0.54
PIK3C3-208ENST00000588156 ZNF511Q8NB15 262 aa11.67□□□□□ -0.54
PIK3C3-208ENST00000588156 NXF1Q9UBU9 619 aaKnown RBP11.67□□□□□ -0.54
PIK3C3-208ENST00000588156 VEGFBP49765 207 aa11.65□□□□□ -0.54
PIK3C3-208ENST00000588156 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
PIK3C3-208ENST00000588156 ZC3H15Q8WU90 426 aaKnown RBP11.65□□□□□ -0.54
PIK3C3-208ENST00000588156 SPDYE5A6NIY4 337 aa11.64□□□□□ -0.55
PIK3C3-208ENST00000588156 CTHP32929 405 aa11.64□□□□□ -0.55
PIK3C3-208ENST00000588156 TBC1D2Q9BYX2 928 aa11.64□□□□□ -0.55
PIK3C3-208ENST00000588156 VARSP26640 1264 aaKnown RBP11.63□□□□□ -0.55
PIK3C3-208ENST00000588156 NNTQ13423 1086 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms