RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	ATAD2	Q6PL18	1390 aa		13.64	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	NGLY1	Q96IV0	654 aa		13.64	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	CLTCL1	P53675	1640 aa		13.64	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	ZNF326	Q5BKZ1	582 aa	Known RBP	13.63	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	TONSL	Q96HA7	1378 aa		13.61	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	VGF	O15240	615 aa	Predicted RBP	13.61	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	RGL3	Q3MIN7	710 aa		13.61	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	SPATA31E1	Q6ZUB1	1445 aa		13.61	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	C1orf167	Q5SNV9	1468 aa		13.61	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	ZEB1	P37275	1124 aa	Predicted RBP	13.6	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	USP21	Q9UK80	565 aa		13.6	□□□□□ -0.23
U2AF1L4-208	ENST00000587987	ZRANB1	Q9UGI0	708 aa		13.58	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	TRPC5	Q9UL62	973 aa	Predicted RBP	13.58	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	LAMC1	P11047	1609 aa		13.57	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	SRCAP	Q6ZRS2	3230 aa		13.57	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	DCAF11	Q8TEB1	546 aa		13.57	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	L3MBTL2	Q969R5	705 aa		13.57	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	NEXMIF	Q5QGS0	1516 aa		13.57	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	ATRN	O75882	1429 aa		13.56	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	PTCH1	Q13635	1447 aa		13.56	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	ORAI2	Q96SN7	254 aa		13.55	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	SOS2	Q07890	1332 aa	Predicted RBP	13.55	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.53	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.53	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	KDM2A	Q9Y2K7	1162 aa		13.53	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	ROBO2	Q9HCK4	1378 aa		13.53	□□□□□ -0.24
U2AF1L4-208	ENST00000587987	MYOM2	P54296	1465 aa		13.51	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	PPL	O60437	1756 aa		13.5	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	IFT172	Q9UG01	1749 aa		13.49	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	MARF1	Q9Y4F3	1742 aa	Known RBP	13.49	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	BCL9L	Q86UU0	1499 aa		13.48	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	NPHP3	Q7Z494	1330 aa		13.48	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	ADGRF5	Q8IZF2	1346 aa		13.48	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	XPC	Q01831	940 aa	Predicted RBP	13.48	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	CCDC125	Q86Z20	511 aa		13.48	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	EP400	Q96L91	3159 aa		13.48	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	PXDN	Q92626	1479 aa		13.48	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	CDC42BPG	Q6DT37	1551 aa		13.47	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	ESCO1	Q5FWF5	840 aa		13.47	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	C14orf93	Q9H972	538 aa	Known RBP	13.47	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	NRXN1	Q9ULB1	1477 aa		13.47	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	PRAG1	Q86YV5	1406 aa		13.47	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	GJD4	Q96KN9	370 aa	Predicted RBP	13.46	□□□□□ -0.25
U2AF1L4-208	ENST00000587987	PIK3C2G	O75747	1445 aa		13.45	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	BLM	P54132	1417 aa	Predicted RBP	13.45	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.44	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	RALGAPB	Q86X10	1494 aa		13.44	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	GLI3	P10071	1580 aa		13.44	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	FOXO3	O43524	673 aa		13.43	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	KIAA1210	Q9ULL0	1709 aa		13.42	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	NUTM2F	A1L443	756 aa		13.42	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	NBPF8	Q3BBV2	869 aa		13.42	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	CFAP70	Q5T0N1	1121 aa		13.42	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	DEFB132	Q7Z7B7	95 aa		13.42	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	LRPPRC	P42704	1394 aa	Known RBP	13.42	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	UNC5CL	Q8IV45	518 aa		13.41	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	BRWD3	Q6RI45	1802 aa		13.41	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	SLIT2	O94813	1529 aa		13.4	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	SF3B2	Q13435	895 aa	Known RBP	13.4	□□□□□ -0.26
U2AF1L4-208	ENST00000587987	LRP5	O75197	1615 aa		13.39	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	USP32	Q8NFA0	1604 aa		13.39	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	STK26	Q9P289	416 aa		13.39	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	ROCK2	O75116	1388 aa	Known RBP	13.39	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	KIF1A	Q12756	1690 aa		13.37	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	GPRASP1	Q5JY77	1395 aa		13.37	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	PLEKHG5	O94827	1062 aa		13.37	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	HAP1	P54257	671 aa	Predicted RBP	13.37	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	WAPL	Q7Z5K2	1190 aa		13.37	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	SEPT12	Q8IYM1	358 aa		13.37	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	SIRT1	Q96EB6	747 aa		13.37	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	CARD11	Q9BXL7	1154 aa		13.37	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	SPATA31A3	Q5VYP0	1347 aa		13.37	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	FMN2	Q9NZ56	1722 aa		13.36	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	TRPM1	Q7Z4N2	1603 aa		13.36	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	SLC24A1	O60721	1099 aa		13.36	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	NBPF1	Q3BBV0	1214 aa		13.36	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	CCDC9	Q9Y3X0	531 aa	Known RBP	13.36	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	PLCH1	Q4KWH8	1693 aa		13.36	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	PLEKHH1	Q9ULM0	1364 aa		13.35	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	TMEM132E	Q6IEE7	984 aa		13.35	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	TECPR2	O15040	1411 aa		13.35	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	ABCC11	Q96J66	1382 aa		13.34	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	KNDC1	Q76NI1	1749 aa		13.34	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	TNS3	Q68CZ2	1445 aa		13.34	□□□□□ -0.27
U2AF1L4-208	ENST00000587987		A0A0G2JS52	829 aa		13.34	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	PSD	A5PKW4	1024 aa	Predicted RBP	13.34	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	MYT1	Q01538	1121 aa		13.34	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	VPS72	Q15906	364 aa		13.34	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	KRT28	Q7Z3Y7	464 aa		13.34	□□□□□ -0.27
U2AF1L4-208	ENST00000587987	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.33	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	KRT27	Q7Z3Y8	459 aa		13.33	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	CABLES1	Q8TDN4	633 aa		13.33	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	NWD2	Q9ULI1	1742 aa		13.33	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	EIF3A	Q14152	1382 aa	Known RBP	13.32	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	ABCA3	Q99758	1704 aa		13.32	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	ADGRB1	O14514	1584 aa		13.32	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	BAG6	P46379	1132 aa		13.31	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	LMOD2	Q6P5Q4	547 aa		13.31	□□□□□ -0.28
U2AF1L4-208	ENST00000587987	TRAK1	Q9UPV9	953 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms