RNA–Protein interactions for RNA: ENST00000587708.6

PSENEN-202, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 1,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-202ENST00000587708 BCANQ96GW7 911 aa23.65■■□□□ 1.38
PSENEN-202ENST00000587708 KNDC1Q76NI1 1749 aa23.65■■□□□ 1.38
PSENEN-202ENST00000587708 RIMS1Q86UR5 1692 aaKnown RBP23.64■■□□□ 1.37
PSENEN-202ENST00000587708 INSRP06213 1382 aa23.64■■□□□ 1.37
PSENEN-202ENST00000587708 METP08581 1390 aa23.64■■□□□ 1.37
PSENEN-202ENST00000587708 LTKP29376 864 aa23.64■■□□□ 1.37
PSENEN-202ENST00000587708 ADAMTS13Q76LX8 1427 aa23.63■■□□□ 1.37
PSENEN-202ENST00000587708 MED14O60244 1454 aa23.63■■□□□ 1.37
PSENEN-202ENST00000587708 TBX22Q9Y458 520 aa23.63■■□□□ 1.37
PSENEN-202ENST00000587708 ANKRD36BQ8N2N9 1353 aa23.62■■□□□ 1.37
PSENEN-202ENST00000587708 CARD14Q9BXL6 1004 aa23.62■■□□□ 1.37
PSENEN-202ENST00000587708 SLC12A5Q9H2X9 1139 aa23.62■■□□□ 1.37
PSENEN-202ENST00000587708 SRPK2P78362 688 aaKnown RBP23.61■■□□□ 1.37
PSENEN-202ENST00000587708 SCAF1Q9H7N4 1312 aaKnown RBP23.6■■□□□ 1.37
PSENEN-202ENST00000587708 CPS1P31327 1500 aa23.6■■□□□ 1.37
PSENEN-202ENST00000587708 SAFB2Q14151 953 aaKnown RBP eCLIP23.6■■□□□ 1.37
PSENEN-202ENST00000587708 GTF3C3Q9Y5Q9 886 aa23.6■■□□□ 1.37
PSENEN-202ENST00000587708 DIP2AQ14689 1571 aa23.59■■□□□ 1.37
PSENEN-202ENST00000587708 CEP170BQ9Y4F5 1589 aaPredicted RBP23.59■■□□□ 1.37
PSENEN-202ENST00000587708 MINK1Q8N4C8 1332 aaPredicted RBP23.59■■□□□ 1.37
PSENEN-202ENST00000587708 SETD1BQ9UPS6 1966 aaKnown RBP23.59■■□□□ 1.37
PSENEN-202ENST00000587708 USP32Q8NFA0 1604 aa23.59■■□□□ 1.37
PSENEN-202ENST00000587708 ZBED9Q6R2W3 1325 aa23.59■■□□□ 1.37
PSENEN-202ENST00000587708 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
PSENEN-202ENST00000587708 CABP2Q9NPB3 220 aa23.58■■□□□ 1.37
PSENEN-202ENST00000587708 NSD2O96028 1365 aa23.57■■□□□ 1.36
PSENEN-202ENST00000587708 CDK19Q9BWU1 502 aa23.57■■□□□ 1.36
PSENEN-202ENST00000587708 TERF2IPQ9NYB0 399 aa23.57■■□□□ 1.36
PSENEN-202ENST00000587708 PPP2R1AP30153 589 aa23.57■■□□□ 1.36
PSENEN-202ENST00000587708 CGNL1Q0VF96 1302 aa23.56■■□□□ 1.36
PSENEN-202ENST00000587708 NSD3Q9BZ95 1437 aa23.55■■□□□ 1.36
PSENEN-202ENST00000587708 ZNF142P52746 1687 aaPredicted RBP23.55■■□□□ 1.36
PSENEN-202ENST00000587708 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
PSENEN-202ENST00000587708 WAPLQ7Z5K2 1190 aa23.54■■□□□ 1.36
PSENEN-202ENST00000587708 PIK3R4Q99570 1358 aa23.53■■□□□ 1.36
PSENEN-202ENST00000587708 WASLO00401 505 aaPredicted RBP23.52■■□□□ 1.36
PSENEN-202ENST00000587708 HDGFL2Q7Z4V5 671 aaPredicted RBP23.51■■□□□ 1.35
PSENEN-202ENST00000587708 ANKLE2Q86XL3 938 aa23.51■■□□□ 1.35
PSENEN-202ENST00000587708 PLEKHH1Q9ULM0 1364 aa23.5■■□□□ 1.35
PSENEN-202ENST00000587708 MORC1Q86VD1 984 aa23.48■■□□□ 1.35
PSENEN-202ENST00000587708 ATP7BP35670 1465 aa23.47■■□□□ 1.35
PSENEN-202ENST00000587708 SLC26A8Q96RN1 970 aa23.47■■□□□ 1.35
PSENEN-202ENST00000587708 PTCH1Q13635 1447 aa23.46■■□□□ 1.35
PSENEN-202ENST00000587708 A0A1W2PP64 1363 aa23.45■■□□□ 1.35
PSENEN-202ENST00000587708 ROBO2Q9HCK4 1378 aa23.45■■□□□ 1.35
PSENEN-202ENST00000587708 ADGRB2O60241 1585 aa23.45■■□□□ 1.34
PSENEN-202ENST00000587708 AMOTL2Q9Y2J4 779 aa23.44■■□□□ 1.34
PSENEN-202ENST00000587708 CABP1Q9NZU7 370 aa23.43■■□□□ 1.34
PSENEN-202ENST00000587708 CCDC61Q9Y6R9 512 aa23.43■■□□□ 1.34
PSENEN-202ENST00000587708 PTPRUQ92729 1446 aa23.42■■□□□ 1.34
PSENEN-202ENST00000587708 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
PSENEN-202ENST00000587708 CD163L1Q9NR16 1453 aa23.42■■□□□ 1.34
PSENEN-202ENST00000587708 WDR43Q15061 677 aaKnown RBP eCLIP23.41■■□□□ 1.34
PSENEN-202ENST00000587708 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
PSENEN-202ENST00000587708 BLMP54132 1417 aaPredicted RBP23.39■■□□□ 1.34
PSENEN-202ENST00000587708 ZNF692Q9BU19 519 aaPredicted RBP23.39■■□□□ 1.34
PSENEN-202ENST00000587708 CPSF1Q10570 1443 aaKnown RBP23.37■■□□□ 1.33
PSENEN-202ENST00000587708 PDE3BQ13370 1112 aa23.36■■□□□ 1.33
PSENEN-202ENST00000587708 PPIP5K1Q6PFW1 1433 aa23.36■■□□□ 1.33
PSENEN-202ENST00000587708 XRN1Q8IZH2 1706 aaKnown RBP23.36■■□□□ 1.33
PSENEN-202ENST00000587708 CFAP53Q96M91 514 aa23.35■■□□□ 1.33
PSENEN-202ENST00000587708 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.34■■□□□ 1.33
PSENEN-202ENST00000587708 FYB1O15117 783 aa23.34■■□□□ 1.33
PSENEN-202ENST00000587708 NGEFQ8N5V2 710 aa23.34■■□□□ 1.33
PSENEN-202ENST00000587708 ADAMTS8Q9UP79 889 aa23.34■■□□□ 1.33
PSENEN-202ENST00000587708 EDC4Q6P2E9 1401 aaKnown RBP23.33■■□□□ 1.33
PSENEN-202ENST00000587708 ANKRD26Q9UPS8 1709 aa23.33■■□□□ 1.32
PSENEN-202ENST00000587708 SMG6Q86US8 1419 aaKnown RBP23.32■■□□□ 1.32
PSENEN-202ENST00000587708 CDC42BPGQ6DT37 1551 aa23.32■■□□□ 1.32
PSENEN-202ENST00000587708 PLEKHG3A1L390 1219 aa23.32■■□□□ 1.32
PSENEN-202ENST00000587708 NEFLP07196 543 aa23.31■■□□□ 1.32
PSENEN-202ENST00000587708 NPHP4O75161 1426 aaPredicted RBP23.29■■□□□ 1.32
PSENEN-202ENST00000587708 MTHFSP49914 203 aa23.28■■□□□ 1.32
PSENEN-202ENST00000587708 NUDCQ9Y266 331 aa23.28■■□□□ 1.32
PSENEN-202ENST00000587708 CHD2O14647 1828 aaKnown RBP23.28■■□□□ 1.32
PSENEN-202ENST00000587708 KCNA6P17658 529 aa23.27■■□□□ 1.32
PSENEN-202ENST00000587708 PRR36Q9H6K5 1346 aa23.26■■□□□ 1.31
PSENEN-202ENST00000587708 GGNBP2Q9H3C7 697 aa23.26■■□□□ 1.31
PSENEN-202ENST00000587708 KIF20BQ96Q89 1820 aa23.26■■□□□ 1.31
PSENEN-202ENST00000587708 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
PSENEN-202ENST00000587708 TOPAZ1Q8N9V7 1692 aa23.25■■□□□ 1.31
PSENEN-202ENST00000587708 MON2Q7Z3U7 1717 aa23.24■■□□□ 1.31
PSENEN-202ENST00000587708 AKAP12Q02952 1782 aa23.24■■□□□ 1.31
PSENEN-202ENST00000587708 TNNT2P45379 298 aaPredicted RBP23.23■■□□□ 1.31
PSENEN-202ENST00000587708 ITSN1Q15811 1721 aa23.23■■□□□ 1.31
PSENEN-202ENST00000587708 NCBP3Q53F19 620 aaKnown RBP23.2■■□□□ 1.3
PSENEN-202ENST00000587708 ERICH6BQ5W0A0 696 aa23.19■■□□□ 1.3
PSENEN-202ENST00000587708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.19■■□□□ 1.3
PSENEN-202ENST00000587708 SUPT16HQ9Y5B9 1047 aaKnown RBP23.19■■□□□ 1.3
PSENEN-202ENST00000587708 ACEP12821 1306 aa23.19■■□□□ 1.3
PSENEN-202ENST00000587708 AATKQ6ZMQ8 1374 aa23.19■■□□□ 1.3
PSENEN-202ENST00000587708 PNPLA6Q8IY17 1366 aa23.17■■□□□ 1.3
PSENEN-202ENST00000587708 COG3Q96JB2 828 aa23.17■■□□□ 1.3
PSENEN-202ENST00000587708 TTC21AQ8NDW8 1320 aa23.16■■□□□ 1.3
PSENEN-202ENST00000587708 SHPRHQ149N8 1683 aa23.16■■□□□ 1.3
PSENEN-202ENST00000587708 USP6P35125 1406 aa23.16■■□□□ 1.3
PSENEN-202ENST00000587708 RUNDC1Q96C34 613 aa23.15■■□□□ 1.3
PSENEN-202ENST00000587708 TTC21BQ7Z4L5 1316 aa23.15■■□□□ 1.3
PSENEN-202ENST00000587708 NCKAP5LQ9HCH0 1330 aa23.15■■□□□ 1.3
PSENEN-202ENST00000587708 FKBP8Q14318 412 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms