RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 HFM1A2PYH4 1435 aa9.63□□□□□ -0.87
SDF2-205ENST00000587629 SETD5Q9C0A6 1442 aa9.63□□□□□ -0.87
SDF2-205ENST00000587629 KIF1BO60333 1816 aa9.63□□□□□ -0.87
SDF2-205ENST00000587629 UPF1Q92900 1129 aaKnown RBP eCLIP9.62□□□□□ -0.87
SDF2-205ENST00000587629 STK26Q9P289 416 aa9.62□□□□□ -0.87
SDF2-205ENST00000587629 NALCNQ8IZF0 1738 aa9.62□□□□□ -0.87
SDF2-205ENST00000587629 RPGRIP1LQ68CZ1 1315 aa9.61□□□□□ -0.87
SDF2-205ENST00000587629 C1orf167Q5SNV9 1468 aa9.61□□□□□ -0.87
SDF2-205ENST00000587629 NGLY1Q96IV0 654 aa9.61□□□□□ -0.87
SDF2-205ENST00000587629 QTRT2Q9H974 415 aaKnown RBP9.61□□□□□ -0.87
SDF2-205ENST00000587629 PNPLA6Q8IY17 1366 aa9.61□□□□□ -0.87
SDF2-205ENST00000587629 NUTM2FA1L443 756 aa9.6□□□□□ -0.87
SDF2-205ENST00000587629 NHSL1Q5SYE7 1610 aa9.6□□□□□ -0.87
SDF2-205ENST00000587629 ADGRF5Q8IZF2 1346 aa9.59□□□□□ -0.87
SDF2-205ENST00000587629 PTCH1Q13635 1447 aa9.59□□□□□ -0.87
SDF2-205ENST00000587629 XPCQ01831 940 aaPredicted RBP9.59□□□□□ -0.87
SDF2-205ENST00000587629 ESCO1Q5FWF5 840 aa9.59□□□□□ -0.87
SDF2-205ENST00000587629 TMEM132EQ6IEE7 984 aa9.59□□□□□ -0.87
SDF2-205ENST00000587629 WAPLQ7Z5K2 1190 aa9.59□□□□□ -0.87
SDF2-205ENST00000587629 MPHOSPH9Q99550 1183 aa9.58□□□□□ -0.88
SDF2-205ENST00000587629 FOXO3O43524 673 aa9.57□□□□□ -0.88
SDF2-205ENST00000587629 ABCB7O75027 752 aa9.57□□□□□ -0.88
SDF2-205ENST00000587629 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
SDF2-205ENST00000587629 SOS2Q07890 1332 aaPredicted RBP9.56□□□□□ -0.88
SDF2-205ENST00000587629 CCDC144AA2RUR9 1427 aa9.56□□□□□ -0.88
SDF2-205ENST00000587629 USP21Q9UK80 565 aa9.56□□□□□ -0.88
SDF2-205ENST00000587629 PPLO60437 1756 aa9.55□□□□□ -0.88
SDF2-205ENST00000587629 PLEKHG5O94827 1062 aa9.55□□□□□ -0.88
SDF2-205ENST00000587629 RGS12O14924 1447 aa9.55□□□□□ -0.88
SDF2-205ENST00000587629 CDK12Q9NYV4 1490 aaPredicted RBP9.54□□□□□ -0.88
SDF2-205ENST00000587629 PLEKHH1Q9ULM0 1364 aa9.54□□□□□ -0.88
SDF2-205ENST00000587629 SPATA31E1Q6ZUB1 1445 aa9.54□□□□□ -0.88
SDF2-205ENST00000587629 NPHP3Q7Z494 1330 aa9.54□□□□□ -0.88
SDF2-205ENST00000587629 TRPC5Q9UL62 973 aaPredicted RBP9.53□□□□□ -0.88
SDF2-205ENST00000587629 LRPPRCP42704 1394 aaKnown RBP9.52□□□□□ -0.88
SDF2-205ENST00000587629 ANKRD30BQ9BXX2 1392 aa9.52□□□□□ -0.88
SDF2-205ENST00000587629 SAFB2Q14151 953 aaKnown RBP eCLIP9.52□□□□□ -0.89
SDF2-205ENST00000587629 PRAG1Q86YV5 1406 aa9.52□□□□□ -0.89
SDF2-205ENST00000587629 FNBP4Q8N3X1 1017 aaPredicted RBP9.52□□□□□ -0.89
SDF2-205ENST00000587629 KCNA4P22459 653 aa9.51□□□□□ -0.89
SDF2-205ENST00000587629 CFAP70Q5T0N1 1121 aa9.51□□□□□ -0.89
SDF2-205ENST00000587629 LAMC1P11047 1609 aa9.51□□□□□ -0.89
SDF2-205ENST00000587629 PXDNQ92626 1479 aa9.51□□□□□ -0.89
SDF2-205ENST00000587629 ABCC11Q96J66 1382 aa9.5□□□□□ -0.89
SDF2-205ENST00000587629 CDC42BPGQ6DT37 1551 aa9.5□□□□□ -0.89
SDF2-205ENST00000587629 YTHDC2Q9H6S0 1430 aaKnown RBP9.5□□□□□ -0.89
SDF2-205ENST00000587629 KRT28Q7Z3Y7 464 aa9.5□□□□□ -0.89
SDF2-205ENST00000587629 C14orf93Q9H972 538 aaKnown RBP9.5□□□□□ -0.89
SDF2-205ENST00000587629 TECPR2O15040 1411 aa9.49□□□□□ -0.89
SDF2-205ENST00000587629 PIK3C2GO75747 1445 aa9.49□□□□□ -0.89
SDF2-205ENST00000587629 MYOM2P54296 1465 aa9.49□□□□□ -0.89
SDF2-205ENST00000587629 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
SDF2-205ENST00000587629 ATAD2Q6PL18 1390 aa9.49□□□□□ -0.89
SDF2-205ENST00000587629 ATRNO75882 1429 aa9.48□□□□□ -0.89
SDF2-205ENST00000587629 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
SDF2-205ENST00000587629 CABLES1Q8TDN4 633 aa9.48□□□□□ -0.89
SDF2-205ENST00000587629 PRAM1Q96QH2 718 aa9.48□□□□□ -0.89
SDF2-205ENST00000587629 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
SDF2-205ENST00000587629 SPATA31A3Q5VYP0 1347 aa9.48□□□□□ -0.89
SDF2-205ENST00000587629 COL22A1Q8NFW1 1626 aaPredicted RBP9.48□□□□□ -0.89
SDF2-205ENST00000587629 DHX57Q6P158 1386 aaKnown RBP9.48□□□□□ -0.89
SDF2-205ENST00000587629 IFT172Q9UG01 1749 aa9.48□□□□□ -0.89
SDF2-205ENST00000587629 BCL9LQ86UU0 1499 aa9.47□□□□□ -0.89
SDF2-205ENST00000587629 PSME1Q06323 249 aa9.47□□□□□ -0.89
SDF2-205ENST00000587629 PMFBP1Q8TBY8 1022 aa9.47□□□□□ -0.89
SDF2-205ENST00000587629 GJD4Q96KN9 370 aaPredicted RBP9.47□□□□□ -0.89
SDF2-205ENST00000587629 POGKQ9P215 609 aa9.47□□□□□ -0.89
SDF2-205ENST00000587629 PHF8Q9UPP1 1060 aa9.47□□□□□ -0.89
SDF2-205ENST00000587629 SIRT1Q96EB6 747 aa9.46□□□□□ -0.9
SDF2-205ENST00000587629 HIRIP3Q9BW71 556 aaPredicted RBP9.46□□□□□ -0.9
SDF2-205ENST00000587629 RAB3GAP2Q9H2M9 1393 aa9.46□□□□□ -0.9
SDF2-205ENST00000587629 FMN2Q9NZ56 1722 aa9.45□□□□□ -0.9
SDF2-205ENST00000587629 UNC5CLQ8IV45 518 aa9.45□□□□□ -0.9
SDF2-205ENST00000587629 TRAK1Q9UPV9 953 aa9.45□□□□□ -0.9
SDF2-205ENST00000587629 CCDC9Q9Y3X0 531 aaKnown RBP9.45□□□□□ -0.9
SDF2-205ENST00000587629 DCAF11Q8TEB1 546 aa9.44□□□□□ -0.9
SDF2-205ENST00000587629 MINK1Q8N4C8 1332 aaPredicted RBP9.44□□□□□ -0.9
SDF2-205ENST00000587629 KNDC1Q76NI1 1749 aa9.44□□□□□ -0.9
SDF2-205ENST00000587629 RGPD8O14715 1765 aaPredicted RBP9.43□□□□□ -0.9
SDF2-205ENST00000587629 NRXN1Q9ULB1 1477 aa9.43□□□□□ -0.9
SDF2-205ENST00000587629 ZNF219Q9P2Y4 722 aaPredicted RBP9.43□□□□□ -0.9
SDF2-205ENST00000587629 RALGAPBQ86X10 1494 aa9.42□□□□□ -0.9
SDF2-205ENST00000587629 TNS3Q68CZ2 1445 aa9.42□□□□□ -0.9
SDF2-205ENST00000587629 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
SDF2-205ENST00000587629 SEPT12Q8IYM1 358 aa9.42□□□□□ -0.9
SDF2-205ENST00000587629 ZRANB1Q9UGI0 708 aa9.42□□□□□ -0.9
SDF2-205ENST00000587629 MARF1Q9Y4F3 1742 aaKnown RBP9.42□□□□□ -0.9
SDF2-205ENST00000587629 KIF1AQ12756 1690 aa9.42□□□□□ -0.9
SDF2-205ENST00000587629 SLIT2O94813 1529 aa9.41□□□□□ -0.9
SDF2-205ENST00000587629 A0A0G2JS52 829 aa9.41□□□□□ -0.9
SDF2-205ENST00000587629 FAM83GA6ND36 823 aa9.41□□□□□ -0.9
SDF2-205ENST00000587629 MYT1Q01538 1121 aa9.41□□□□□ -0.9
SDF2-205ENST00000587629 EP400Q96L91 3159 aa9.41□□□□□ -0.9
SDF2-205ENST00000587629 SRCAPQ6ZRS2 3230 aa9.41□□□□□ -0.9
SDF2-205ENST00000587629 SBNO1A3KN83 1393 aa9.4□□□□□ -0.9
SDF2-205ENST00000587629 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.9
SDF2-205ENST00000587629 VPS72Q15906 364 aa9.4□□□□□ -0.9
SDF2-205ENST00000587629 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
SDF2-205ENST00000587629 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
SDF2-205ENST00000587629 USP32Q8NFA0 1604 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms