RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 PDE3BQ13370 1112 aa20.72■□□□□ 0.91
PPP6R1-204ENST00000587457 VGFO15240 615 aaPredicted RBP20.71■□□□□ 0.91
PPP6R1-204ENST00000587457 CDCA7LQ96GN5 454 aa20.71■□□□□ 0.91
PPP6R1-204ENST00000587457 CENPJQ9HC77 1338 aaPredicted RBP20.71■□□□□ 0.91
PPP6R1-204ENST00000587457 MLECQ14165 292 aa20.71■□□□□ 0.91
PPP6R1-204ENST00000587457 SETBP1Q9Y6X0 1596 aa20.7■□□□□ 0.9
PPP6R1-204ENST00000587457 NEXMIFQ5QGS0 1516 aa20.7■□□□□ 0.9
PPP6R1-204ENST00000587457 ADGRB1O14514 1584 aa20.69■□□□□ 0.9
PPP6R1-204ENST00000587457 AMER1Q5JTC6 1135 aaPredicted RBP20.69■□□□□ 0.9
PPP6R1-204ENST00000587457 SLC24A1O60721 1099 aa20.68■□□□□ 0.9
PPP6R1-204ENST00000587457 PREX1Q8TCU6 1659 aa20.66■□□□□ 0.9
PPP6R1-204ENST00000587457 SBNO2Q9Y2G9 1366 aa20.65■□□□□ 0.9
PPP6R1-204ENST00000587457 MYOM1P52179 1685 aa20.65■□□□□ 0.9
PPP6R1-204ENST00000587457 AGLP35573 1532 aa20.65■□□□□ 0.9
PPP6R1-204ENST00000587457 KDM5AP29375 1690 aaKnown RBP20.65■□□□□ 0.9
PPP6R1-204ENST00000587457 REREQ9P2R6 1566 aa20.65■□□□□ 0.9
PPP6R1-204ENST00000587457 FAM161AQ3B820 660 aa20.65■□□□□ 0.9
PPP6R1-204ENST00000587457 MYO3AQ8NEV4 1616 aa20.64■□□□□ 0.89
PPP6R1-204ENST00000587457 C8orf34Q49A92 452 aa20.63■□□□□ 0.89
PPP6R1-204ENST00000587457 RRAGDQ9NQL2 400 aaPredicted RBP20.63■□□□□ 0.89
PPP6R1-204ENST00000587457 KIF13AQ9H1H9 1805 aa20.63■□□□□ 0.89
PPP6R1-204ENST00000587457 PPP2R1AP30153 589 aa20.62■□□□□ 0.89
PPP6R1-204ENST00000587457 ASXL1Q8IXJ9 1541 aa20.62■□□□□ 0.89
PPP6R1-204ENST00000587457 KDM2BQ8NHM5 1336 aa20.62■□□□□ 0.89
PPP6R1-204ENST00000587457 PPP6R1Q9UPN7 881 aa20.61■□□□□ 0.89
PPP6R1-204ENST00000587457 CARD14Q9BXL6 1004 aa20.61■□□□□ 0.89
PPP6R1-204ENST00000587457 STAG3Q9UJ98 1225 aa20.61■□□□□ 0.89
PPP6R1-204ENST00000587457 TMEM131LA2VDJ0 1609 aa20.6■□□□□ 0.89
PPP6R1-204ENST00000587457 GLIPR1L2Q4G1C9 344 aa20.6■□□□□ 0.89
PPP6R1-204ENST00000587457 C20orf194Q5TEA3 1177 aa20.6■□□□□ 0.89
PPP6R1-204ENST00000587457 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
PPP6R1-204ENST00000587457 CENPQQ7L2Z9 268 aaPredicted RBP20.58■□□□□ 0.89
PPP6R1-204ENST00000587457 STK26Q9P289 416 aa20.58■□□□□ 0.89
PPP6R1-204ENST00000587457 ARHGEF40Q8TER5 1519 aa20.58■□□□□ 0.88
PPP6R1-204ENST00000587457 POGKQ9P215 609 aa20.58■□□□□ 0.88
PPP6R1-204ENST00000587457 SAFB2Q14151 953 aaKnown RBP eCLIP20.57■□□□□ 0.88
PPP6R1-204ENST00000587457 CLTCQ00610 1675 aaKnown RBP20.57■□□□□ 0.88
PPP6R1-204ENST00000587457 NPC1L1Q9UHC9 1359 aa20.56■□□□□ 0.88
PPP6R1-204ENST00000587457 QRICH2Q9H0J4 1663 aa20.56■□□□□ 0.88
PPP6R1-204ENST00000587457 SLC12A5Q9H2X9 1139 aa20.56■□□□□ 0.88
PPP6R1-204ENST00000587457 MYO5BQ9ULV0 1848 aa20.55■□□□□ 0.88
PPP6R1-204ENST00000587457 ADAMTS8Q9UP79 889 aa20.53■□□□□ 0.88
PPP6R1-204ENST00000587457 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.88
PPP6R1-204ENST00000587457 VSIG10Q8N0Z9 540 aa20.52■□□□□ 0.88
PPP6R1-204ENST00000587457 BLMP54132 1417 aaPredicted RBP20.52■□□□□ 0.87
PPP6R1-204ENST00000587457 EVC2Q86UK5 1308 aa20.51■□□□□ 0.87
PPP6R1-204ENST00000587457 RGS3P49796 1198 aa20.51■□□□□ 0.87
PPP6R1-204ENST00000587457 INSRP06213 1382 aa20.51■□□□□ 0.87
PPP6R1-204ENST00000587457 SPATA31D1Q6ZQQ2 1576 aa20.5■□□□□ 0.87
PPP6R1-204ENST00000587457 L1TD1Q5T7N2 865 aaKnown RBP20.5■□□□□ 0.87
PPP6R1-204ENST00000587457 ZMYND15Q9H091 742 aa20.5■□□□□ 0.87
PPP6R1-204ENST00000587457 NSD3Q9BZ95 1437 aa20.5■□□□□ 0.87
PPP6R1-204ENST00000587457 CABP2Q9NPB3 220 aa20.5■□□□□ 0.87
PPP6R1-204ENST00000587457 ARHGEF28Q8N1W1 1705 aaKnown RBP20.49■□□□□ 0.87
PPP6R1-204ENST00000587457 ZMYM3Q14202 1370 aa20.49■□□□□ 0.87
PPP6R1-204ENST00000587457 WDR43Q15061 677 aaKnown RBP eCLIP20.49■□□□□ 0.87
PPP6R1-204ENST00000587457 TULP4Q9NRJ4 1543 aa20.49■□□□□ 0.87
PPP6R1-204ENST00000587457 A2ML1A8K2U0 1454 aa20.49■□□□□ 0.87
PPP6R1-204ENST00000587457 PRAM1Q96QH2 718 aa20.47■□□□□ 0.87
PPP6R1-204ENST00000587457 YTHDC2Q9H6S0 1430 aaKnown RBP20.47■□□□□ 0.87
PPP6R1-204ENST00000587457 NAP1L5Q96NT1 182 aaPredicted RBP20.46■□□□□ 0.87
PPP6R1-204ENST00000587457 RIMS2Q9UQ26 1411 aa20.45■□□□□ 0.86
PPP6R1-204ENST00000587457 MINK1Q8N4C8 1332 aaPredicted RBP20.45■□□□□ 0.86
PPP6R1-204ENST00000587457 ALKQ9UM73 1620 aa20.45■□□□□ 0.86
PPP6R1-204ENST00000587457 PTPRMP28827 1452 aa20.44■□□□□ 0.86
PPP6R1-204ENST00000587457 SRPK2P78362 688 aaKnown RBP20.43■□□□□ 0.86
PPP6R1-204ENST00000587457 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
PPP6R1-204ENST00000587457 TNNT2P45379 298 aaPredicted RBP20.43■□□□□ 0.86
PPP6R1-204ENST00000587457 HSP90AA2PQ14568 343 aaPredicted RBP20.43■□□□□ 0.86
PPP6R1-204ENST00000587457 MORC1Q86VD1 984 aa20.42■□□□□ 0.86
PPP6R1-204ENST00000587457 PNNQ9H307 717 aaKnown RBP20.41■□□□□ 0.86
PPP6R1-204ENST00000587457 ARXQ96QS3 562 aa20.41■□□□□ 0.86
PPP6R1-204ENST00000587457 SLKQ9H2G2 1235 aaPredicted RBP20.41■□□□□ 0.86
PPP6R1-204ENST00000587457 USP19O94966 1318 aa20.41■□□□□ 0.86
PPP6R1-204ENST00000587457 HSP90AA1P07900 732 aaKnown RBP20.4■□□□□ 0.86
PPP6R1-204ENST00000587457 ANKRD36BQ8N2N9 1353 aa20.39■□□□□ 0.86
PPP6R1-204ENST00000587457 CGNL1Q0VF96 1302 aa20.39■□□□□ 0.85
PPP6R1-204ENST00000587457 CCDC146Q8IYE0 955 aa20.38■□□□□ 0.85
PPP6R1-204ENST00000587457 XRCC6P12956 609 aaKnown RBP eCLIP20.38■□□□□ 0.85
PPP6R1-204ENST00000587457 TNRQ92752 1358 aa20.37■□□□□ 0.85
PPP6R1-204ENST00000587457 RRP9O43818 475 aaKnown RBP20.37■□□□□ 0.85
PPP6R1-204ENST00000587457 BECN1Q14457 450 aa20.37■□□□□ 0.85
PPP6R1-204ENST00000587457 CLCN1P35523 988 aa20.37■□□□□ 0.85
PPP6R1-204ENST00000587457 PLEKHH1Q9ULM0 1364 aa20.37■□□□□ 0.85
PPP6R1-204ENST00000587457 WAPLQ7Z5K2 1190 aa20.36■□□□□ 0.85
PPP6R1-204ENST00000587457 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.35■□□□□ 0.85
PPP6R1-204ENST00000587457 DUSP27Q5VZP5 1158 aa20.35■□□□□ 0.85
PPP6R1-204ENST00000587457 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.35■□□□□ 0.851e-5■□□□□ 8.9
PPP6R1-204ENST00000587457 SEC24BO95487 1268 aa20.34■□□□□ 0.85
PPP6R1-204ENST00000587457 A0A1W2PP64 1363 aa20.34■□□□□ 0.85
PPP6R1-204ENST00000587457 GOLGA6L3A6NEY3 463 aa20.34■□□□□ 0.85
PPP6R1-204ENST00000587457 CDK19Q9BWU1 502 aa20.34■□□□□ 0.85
PPP6R1-204ENST00000587457 POLR3AO14802 1390 aaPredicted RBP20.33■□□□□ 0.85
PPP6R1-204ENST00000587457 ATAD2Q6PL18 1390 aa20.33■□□□□ 0.85
PPP6R1-204ENST00000587457 CEBPAP49715 358 aaPredicted RBP20.32■□□□□ 0.84
PPP6R1-204ENST00000587457 PANK2Q9BZ23 570 aa20.32■□□□□ 0.84
PPP6R1-204ENST00000587457 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
PPP6R1-204ENST00000587457 METP08581 1390 aa20.32■□□□□ 0.84
PPP6R1-204ENST00000587457 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
PPP6R1-204ENST00000587457 NINLQ9Y2I6 1382 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms