RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 DEPDC5O75140 1603 aa20.91■□□□□ 0.94
RANBP3-209ENST00000587411 CCDC27Q2M243 656 aa20.91■□□□□ 0.94
RANBP3-209ENST00000587411 CHMP5Q9NZZ3 219 aa20.91■□□□□ 0.94
RANBP3-209ENST00000587411 RLBP1P12271 317 aa20.9■□□□□ 0.94
RANBP3-209ENST00000587411 XRCC6P12956 609 aaKnown RBP eCLIP20.9■□□□□ 0.94
RANBP3-209ENST00000587411 MAP3K4Q9Y6R4 1608 aa20.9■□□□□ 0.94
RANBP3-209ENST00000587411 TRAPPC8Q9Y2L5 1435 aa20.89■□□□□ 0.94
RANBP3-209ENST00000587411 MYO3AQ8NEV4 1616 aa20.89■□□□□ 0.93
RANBP3-209ENST00000587411 TCP11L2Q8N4U5 519 aa20.88■□□□□ 0.93
RANBP3-209ENST00000587411 ABCA6Q8N139 1617 aa20.88■□□□□ 0.93
RANBP3-209ENST00000587411 SPAG9O60271 1321 aaKnown RBP20.87■□□□□ 0.93
RANBP3-209ENST00000587411 MORC1Q86VD1 984 aa20.87■□□□□ 0.93
RANBP3-209ENST00000587411 CFAP70Q5T0N1 1121 aa20.86■□□□□ 0.93
RANBP3-209ENST00000587411 MYH16Q9H6N6 1097 aa20.86■□□□□ 0.93
RANBP3-209ENST00000587411 MVPQ14764 893 aaKnown RBP20.86■□□□□ 0.93
RANBP3-209ENST00000587411 CLCN1P35523 988 aa20.85■□□□□ 0.93
RANBP3-209ENST00000587411 C22orf23Q9BZE7 217 aa20.85■□□□□ 0.93
RANBP3-209ENST00000587411 ZFYVE16Q7Z3T8 1539 aa20.85■□□□□ 0.93
RANBP3-209ENST00000587411 NEUROD2Q15784 382 aa20.85■□□□□ 0.93
RANBP3-209ENST00000587411 ISY1Q9ULR0 285 aaKnown RBP20.85■□□□□ 0.93
RANBP3-209ENST00000587411 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
RANBP3-209ENST00000587411 MRE11P49959 708 aa20.84■□□□□ 0.93
RANBP3-209ENST00000587411 NSD3Q9BZ95 1437 aa20.84■□□□□ 0.93
RANBP3-209ENST00000587411 RRP7AQ9Y3A4 280 aaKnown RBP20.84■□□□□ 0.93
RANBP3-209ENST00000587411 CT47B1P0C2W7 299 aaPredicted RBP20.83■□□□□ 0.93
RANBP3-209ENST00000587411 TNNQ9UQP3 1299 aa20.83■□□□□ 0.93
RANBP3-209ENST00000587411 TRAK2O60296 914 aa20.83■□□□□ 0.92
RANBP3-209ENST00000587411 PNNQ9H307 717 aaKnown RBP20.83■□□□□ 0.92
RANBP3-209ENST00000587411 DDX11L8A8MPP1 907 aa20.82■□□□□ 0.92
RANBP3-209ENST00000587411 ZKSCAN2Q63HK3 967 aa20.82■□□□□ 0.92
RANBP3-209ENST00000587411 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
RANBP3-209ENST00000587411 ZNF518AQ6AHZ1 1483 aa20.81■□□□□ 0.92
RANBP3-209ENST00000587411 BCL2L13Q9BXK5 485 aa20.81■□□□□ 0.92
RANBP3-209ENST00000587411 USP32Q8NFA0 1604 aa20.8■□□□□ 0.92
RANBP3-209ENST00000587411 NRXN1Q9ULB1 1477 aa20.8■□□□□ 0.92
RANBP3-209ENST00000587411 DZIP1LQ8IYY4 767 aaKnown RBP20.8■□□□□ 0.92
RANBP3-209ENST00000587411 ADGRF5Q8IZF2 1346 aa20.8■□□□□ 0.92
RANBP3-209ENST00000587411 ADGRL1O94910 1474 aa20.8■□□□□ 0.92
RANBP3-209ENST00000587411 HDAC1Q13547 482 aaPredicted RBP20.8■□□□□ 0.92
RANBP3-209ENST00000587411 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
RANBP3-209ENST00000587411 HSCBQ8IWL3 235 aa20.79■□□□□ 0.92
RANBP3-209ENST00000587411 ARAP3Q8WWN8 1544 aa20.79■□□□□ 0.92
RANBP3-209ENST00000587411 SPRYD3Q8NCJ5 442 aa20.79■□□□□ 0.92
RANBP3-209ENST00000587411 GZF1Q9H116 711 aaPredicted RBP20.79■□□□□ 0.92
RANBP3-209ENST00000587411 MFAP1P55081 439 aaKnown RBP20.78■□□□□ 0.92
RANBP3-209ENST00000587411 SETBP1Q9Y6X0 1596 aa20.78■□□□□ 0.92
RANBP3-209ENST00000587411 PANK2Q9BZ23 570 aa20.78■□□□□ 0.92
RANBP3-209ENST00000587411 IFT172Q9UG01 1749 aa20.77■□□□□ 0.92
RANBP3-209ENST00000587411 ARXQ96QS3 562 aa20.77■□□□□ 0.92
RANBP3-209ENST00000587411 NCOA3Q9Y6Q9 1424 aa20.76■□□□□ 0.91
RANBP3-209ENST00000587411 GLIPR1L2Q4G1C9 344 aa20.76■□□□□ 0.91
RANBP3-209ENST00000587411 NAP1L5Q96NT1 182 aaPredicted RBP20.76■□□□□ 0.91
RANBP3-209ENST00000587411 ADGRB2O60241 1585 aa20.74■□□□□ 0.91
RANBP3-209ENST00000587411 MTHFSP49914 203 aa20.74■□□□□ 0.91
RANBP3-209ENST00000587411 ZNF692Q9BU19 519 aaPredicted RBP20.74■□□□□ 0.91
RANBP3-209ENST00000587411 GRPEL1Q9HAV7 217 aa20.74■□□□□ 0.91
RANBP3-209ENST00000587411 DDX19BQ9UMR2 479 aa20.74■□□□□ 0.91
RANBP3-209ENST00000587411 KIF1BO60333 1816 aa20.74■□□□□ 0.91
RANBP3-209ENST00000587411 TNNT2P45379 298 aaPredicted RBP20.74■□□□□ 0.91
RANBP3-209ENST00000587411 AFAP1Q8N556 730 aa20.73■□□□□ 0.91
RANBP3-209ENST00000587411 SNX21Q969T3 373 aa20.73■□□□□ 0.91
RANBP3-209ENST00000587411 SMC5Q8IY18 1101 aa20.72■□□□□ 0.91
RANBP3-209ENST00000587411 CIZ1Q9ULV3 898 aaPredicted RBP20.72■□□□□ 0.91
RANBP3-209ENST00000587411 NSD2O96028 1365 aa20.72■□□□□ 0.91
RANBP3-209ENST00000587411 ZCCHC11Q5TAX3 1644 aaKnown RBP20.72■□□□□ 0.91
RANBP3-209ENST00000587411 DDIT3P35638 169 aa20.72■□□□□ 0.91
RANBP3-209ENST00000587411 PTMSP20962 102 aa20.71■□□□□ 0.91
RANBP3-209ENST00000587411 RBM25P49756 843 aaKnown RBP20.71■□□□□ 0.91
RANBP3-209ENST00000587411 ATP7AQ04656 1500 aa20.71■□□□□ 0.91
RANBP3-209ENST00000587411 UGGT1Q9NYU2 1555 aa20.71■□□□□ 0.91
RANBP3-209ENST00000587411 INO80Q9ULG1 1556 aaPredicted RBP20.71■□□□□ 0.91
RANBP3-209ENST00000587411 ZC3H13Q5T200 1668 aaKnown RBP20.71■□□□□ 0.91
RANBP3-209ENST00000587411 SLC12A5Q9H2X9 1139 aa20.71■□□□□ 0.91
RANBP3-209ENST00000587411 UHRF1BP1LA0JNW5 1464 aa20.7■□□□□ 0.9
RANBP3-209ENST00000587411 SMC4Q9NTJ3 1288 aa20.7■□□□□ 0.9
RANBP3-209ENST00000587411 HSP90AA1P07900 732 aaKnown RBP20.69■□□□□ 0.9
RANBP3-209ENST00000587411 EFCAB6Q5THR3 1501 aa20.69■□□□□ 0.9
RANBP3-209ENST00000587411 KIF3BO15066 747 aa20.69■□□□□ 0.9
RANBP3-209ENST00000587411 TRIM27P14373 513 aa20.69■□□□□ 0.9
RANBP3-209ENST00000587411 PUS7Q96PZ0 661 aaKnown RBP20.68■□□□□ 0.9
RANBP3-209ENST00000587411 QRICH2Q9H0J4 1663 aa20.68■□□□□ 0.9
RANBP3-209ENST00000587411 RRP9O43818 475 aaKnown RBP20.68■□□□□ 0.9
RANBP3-209ENST00000587411 U2AF1L5P0DN76 240 aaPredicted RBP20.68■□□□□ 0.9
RANBP3-209ENST00000587411 U2AF1Q01081 240 aaKnown RBP eCLIP20.68■□□□□ 0.9
RANBP3-209ENST00000587411 SKOR2Q2VWA4 1001 aaPredicted RBP20.68■□□□□ 0.9
RANBP3-209ENST00000587411 ATF7IPQ6VMQ6 1270 aa20.68■□□□□ 0.9
RANBP3-209ENST00000587411 GBP4Q96PP9 640 aa20.68■□□□□ 0.9
RANBP3-209ENST00000587411 MROH1Q8NDA8 1641 aa20.67■□□□□ 0.9
RANBP3-209ENST00000587411 CHD1O14646 1710 aa20.67■□□□□ 0.9
RANBP3-209ENST00000587411 ESPNB1AK53 854 aa20.67■□□□□ 0.9
RANBP3-209ENST00000587411 ITPRIPQ8IWB1 547 aa20.67■□□□□ 0.9
RANBP3-209ENST00000587411 FANCAO15360 1455 aa20.67■□□□□ 0.9
RANBP3-209ENST00000587411 MROH2AA6NES4 1674 aa20.67■□□□□ 0.9
RANBP3-209ENST00000587411 ADGRB3O60242 1522 aa20.66■□□□□ 0.9
RANBP3-209ENST00000587411 NOS1P29475 1434 aa20.66■□□□□ 0.9
RANBP3-209ENST00000587411 ERCC6L2Q5T890 1561 aa20.65■□□□□ 0.9
RANBP3-209ENST00000587411 IL16Q14005 1332 aa20.65■□□□□ 0.9
RANBP3-209ENST00000587411 ABCC11Q96J66 1382 aa20.64■□□□□ 0.9
RANBP3-209ENST00000587411 EXOSC9Q06265 439 aaKnown RBP20.64■□□□□ 0.9
RANBP3-209ENST00000587411 TRAK1Q9UPV9 953 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms