RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 ABCA9Q8IUA7 1624 aa16.53■□□□□ 0.24
DNMT1-207ENST00000586588 HS1BP3Q53T59 392 aa16.52■□□□□ 0.24
DNMT1-207ENST00000586588 MAST1Q9Y2H9 1570 aa16.52■□□□□ 0.23
DNMT1-207ENST00000586588 MSNP26038 577 aaKnown RBP16.51■□□□□ 0.23
DNMT1-207ENST00000586588 NBPF1Q3BBV0 1214 aa16.51■□□□□ 0.23
DNMT1-207ENST00000586588 PANK1Q8TE04 598 aa16.51■□□□□ 0.23
DNMT1-207ENST00000586588 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-207ENST00000586588 ANP32BQ92688 251 aaKnown RBP16.51■□□□□ 0.23
DNMT1-207ENST00000586588 TSPY4P0CV99 314 aa16.5■□□□□ 0.23
DNMT1-207ENST00000586588 TSPY10P0CW01 314 aa16.5■□□□□ 0.23
DNMT1-207ENST00000586588 KNSTRNQ9Y448 316 aa16.5■□□□□ 0.23
DNMT1-207ENST00000586588 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
DNMT1-207ENST00000586588 TRAPPC8Q9Y2L5 1435 aa16.5■□□□□ 0.23
DNMT1-207ENST00000586588 TNPO1Q92973 898 aaKnown RBP16.49■□□□□ 0.23
DNMT1-207ENST00000586588 SNX21Q969T3 373 aa16.49■□□□□ 0.23
DNMT1-207ENST00000586588 RWDD1Q9H446 243 aaPredicted RBP16.49■□□□□ 0.23
DNMT1-207ENST00000586588 MAGI2Q86UL8 1455 aa16.49■□□□□ 0.23
DNMT1-207ENST00000586588 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
DNMT1-207ENST00000586588 SMC5Q8IY18 1101 aa16.49■□□□□ 0.23
DNMT1-207ENST00000586588 ARAP3Q8WWN8 1544 aa16.49■□□□□ 0.23
DNMT1-207ENST00000586588 NASPP49321 788 aaPredicted RBP16.49■□□□□ 0.23
DNMT1-207ENST00000586588 APAF1O14727 1248 aa16.48■□□□□ 0.23
DNMT1-207ENST00000586588 PCDHB15Q9Y5E8 787 aa16.48■□□□□ 0.23
DNMT1-207ENST00000586588 NPC1L1Q9UHC9 1359 aa16.48■□□□□ 0.23
DNMT1-207ENST00000586588 EIF2AK4Q9P2K8 1649 aaKnown RBP16.47■□□□□ 0.23
DNMT1-207ENST00000586588 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
DNMT1-207ENST00000586588 ZNF500O60304 480 aaPredicted RBP16.47■□□□□ 0.23
DNMT1-207ENST00000586588 FAM13BQ9NYF5 915 aa16.47■□□□□ 0.23
DNMT1-207ENST00000586588 EFCAB2Q5VUJ9 269 aa16.46■□□□□ 0.23
DNMT1-207ENST00000586588 DYNC1I1O14576 645 aa16.45■□□□□ 0.22
DNMT1-207ENST00000586588 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
DNMT1-207ENST00000586588 MFAP1P55081 439 aaKnown RBP16.44■□□□□ 0.22
DNMT1-207ENST00000586588 FGD1P98174 961 aa16.44■□□□□ 0.22
DNMT1-207ENST00000586588 UTP14CQ5TAP6 766 aaKnown RBP16.44■□□□□ 0.22
DNMT1-207ENST00000586588 RSPH4AQ5TD94 716 aa16.44■□□□□ 0.22
DNMT1-207ENST00000586588 FANCAO15360 1455 aa16.44■□□□□ 0.22
DNMT1-207ENST00000586588 ASXL1Q8IXJ9 1541 aa16.44■□□□□ 0.22
DNMT1-207ENST00000586588 NOL7Q9UMY1 257 aaKnown RBP16.44■□□□□ 0.22
DNMT1-207ENST00000586588 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
DNMT1-207ENST00000586588 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
DNMT1-207ENST00000586588 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
DNMT1-207ENST00000586588 R3HCC1Q9Y3T6 440 aaKnown RBP16.44■□□□□ 0.22
DNMT1-207ENST00000586588 A0A0U1RQG5 324 aaPredicted RBP16.43■□□□□ 0.22
DNMT1-207ENST00000586588 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
DNMT1-207ENST00000586588 A2MP01023 1474 aa16.43■□□□□ 0.22
DNMT1-207ENST00000586588 CLEC17AQ6ZS10 378 aa16.42■□□□□ 0.22
DNMT1-207ENST00000586588 SYNMO15061 1565 aa16.42■□□□□ 0.22
DNMT1-207ENST00000586588 CSPP1Q1MSJ5 1256 aa16.42■□□□□ 0.22
DNMT1-207ENST00000586588 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
DNMT1-207ENST00000586588 ZFYVE16Q7Z3T8 1539 aa16.41■□□□□ 0.22
DNMT1-207ENST00000586588 FAM135AQ9P2D6 1515 aa16.41■□□□□ 0.22
DNMT1-207ENST00000586588 UQCRHLA0A096LP55 91 aa16.41■□□□□ 0.22
DNMT1-207ENST00000586588 UQCRHP07919 91 aa16.41■□□□□ 0.22
DNMT1-207ENST00000586588 RARSP54136 660 aaKnown RBP16.41■□□□□ 0.22
DNMT1-207ENST00000586588 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
DNMT1-207ENST00000586588 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
DNMT1-207ENST00000586588 ARHGAP31Q2M1Z3 1444 aa16.41■□□□□ 0.22
DNMT1-207ENST00000586588 MCM5P33992 734 aa16.4■□□□□ 0.22
DNMT1-207ENST00000586588 UNC13BO14795 1591 aa16.4■□□□□ 0.22
DNMT1-207ENST00000586588 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.22
DNMT1-207ENST00000586588 CDCA8Q53HL2 280 aa16.39■□□□□ 0.21
DNMT1-207ENST00000586588 WWC1Q8IX03 1113 aa16.39■□□□□ 0.21
DNMT1-207ENST00000586588 ZNF445P59923 1031 aa16.39■□□□□ 0.21
DNMT1-207ENST00000586588 PDLIM2Q96JY6 352 aa16.39■□□□□ 0.21
DNMT1-207ENST00000586588 RLBP1P12271 317 aa16.38■□□□□ 0.21
DNMT1-207ENST00000586588 DMTNQ08495 405 aa16.38■□□□□ 0.21
DNMT1-207ENST00000586588 RNF17Q9BXT8 1623 aaKnown RBP16.38■□□□□ 0.21
DNMT1-207ENST00000586588 ADGRL1O94910 1474 aa16.38■□□□□ 0.21
DNMT1-207ENST00000586588 HSP90AB1P08238 724 aaKnown RBP16.37■□□□□ 0.21
DNMT1-207ENST00000586588 INO80Q9ULG1 1556 aaPredicted RBP16.37■□□□□ 0.21
DNMT1-207ENST00000586588 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
DNMT1-207ENST00000586588 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
DNMT1-207ENST00000586588 DUOX2Q9NRD8 1548 aa16.37■□□□□ 0.21
DNMT1-207ENST00000586588 NCLP19338 710 aaKnown RBP16.37■□□□□ 0.21
DNMT1-207ENST00000586588 CCDC94Q9BW85 323 aaPredicted RBP16.36■□□□□ 0.21
DNMT1-207ENST00000586588 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.36■□□□□ 0.21
DNMT1-207ENST00000586588 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
DNMT1-207ENST00000586588 SASS6Q6UVJ0 657 aa16.35■□□□□ 0.21
DNMT1-207ENST00000586588 ZKSCAN5Q9Y2L8 839 aa16.34■□□□□ 0.21
DNMT1-207ENST00000586588 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
DNMT1-207ENST00000586588 MVPQ14764 893 aaKnown RBP16.34■□□□□ 0.21
DNMT1-207ENST00000586588 DDX49Q9Y6V7 483 aaKnown RBP16.34■□□□□ 0.21
DNMT1-207ENST00000586588 PLA2R1Q13018 1463 aa16.34■□□□□ 0.21
DNMT1-207ENST00000586588 ATP7AQ04656 1500 aa16.33■□□□□ 0.21
DNMT1-207ENST00000586588 CD109Q6YHK3 1445 aa16.33■□□□□ 0.2
DNMT1-207ENST00000586588 SPAG9O60271 1321 aaKnown RBP16.33■□□□□ 0.2
DNMT1-207ENST00000586588 IQGAP3Q86VI3 1631 aa16.33■□□□□ 0.2
DNMT1-207ENST00000586588 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
DNMT1-207ENST00000586588 ZSCAN20P17040 1043 aaPredicted RBP16.32■□□□□ 0.2
DNMT1-207ENST00000586588 KANK1Q14678 1352 aa16.31■□□□□ 0.2
DNMT1-207ENST00000586588 WDR63Q8IWG1 891 aa16.31■□□□□ 0.2
DNMT1-207ENST00000586588 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
DNMT1-207ENST00000586588 ZHX1Q9UKY1 873 aaPredicted RBP16.3■□□□□ 0.2
DNMT1-207ENST00000586588 TNNQ9UQP3 1299 aa16.3■□□□□ 0.2
DNMT1-207ENST00000586588 KIDINS220Q9ULH0 1771 aa16.3■□□□□ 0.2
DNMT1-207ENST00000586588 K7ELQ4 463 aaPredicted RBP16.3■□□□□ 0.2
DNMT1-207ENST00000586588 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
DNMT1-207ENST00000586588 BAG4O95429 457 aaKnown RBP16.3■□□□□ 0.2
DNMT1-207ENST00000586588 GTPBP4Q9BZE4 634 aaKnown RBP16.3■□□□□ 0.2
DNMT1-207ENST00000586588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■■□□ 16.1
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms