RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 NSD3Q9BZ95 1437 aa30■■■□□ 2.39
CIRBP-208ENST00000586548 ATAD2Q6PL18 1390 aa29.98■■■□□ 2.39
CIRBP-208ENST00000586548 ANKRD36BQ8N2N9 1353 aa29.97■■■□□ 2.39
CIRBP-208ENST00000586548 SLIT1O75093 1534 aa29.97■■■□□ 2.39
CIRBP-208ENST00000586548 MINK1Q8N4C8 1332 aaPredicted RBP29.96■■■□□ 2.39
CIRBP-208ENST00000586548 CABP2Q9NPB3 220 aa29.96■■■□□ 2.39
CIRBP-208ENST00000586548 METP08581 1390 aa29.96■■■□□ 2.39
CIRBP-208ENST00000586548 PLEKHG1Q9ULL1 1385 aa29.96■■■□□ 2.39
CIRBP-208ENST00000586548 ARHGAP23Q9P227 1491 aa29.95■■■□□ 2.39
CIRBP-208ENST00000586548 TECPR2O15040 1411 aa29.95■■■□□ 2.39
CIRBP-208ENST00000586548 SRPK2P78362 688 aaKnown RBP29.93■■■□□ 2.38
CIRBP-208ENST00000586548 CPS1P31327 1500 aa29.93■■■□□ 2.38
CIRBP-208ENST00000586548 ADAMTS13Q76LX8 1427 aa29.92■■■□□ 2.38
CIRBP-208ENST00000586548 RIMS1Q86UR5 1692 aaKnown RBP29.91■■■□□ 2.38
CIRBP-208ENST00000586548 FAM135BQ49AJ0 1406 aa29.91■■■□□ 2.38
CIRBP-208ENST00000586548 SIRT1Q96EB6 747 aa29.91■■■□□ 2.38
CIRBP-208ENST00000586548 SUPT16HQ9Y5B9 1047 aaKnown RBP29.91■■■□□ 2.38
CIRBP-208ENST00000586548 BLMP54132 1417 aaPredicted RBP29.9■■■□□ 2.38
CIRBP-208ENST00000586548 PLEKHH1Q9ULM0 1364 aa29.88■■■□□ 2.37
CIRBP-208ENST00000586548 LTKP29376 864 aa29.88■■■□□ 2.37
CIRBP-208ENST00000586548 BCANQ96GW7 911 aa29.88■■■□□ 2.37
CIRBP-208ENST00000586548 EID1Q9Y6B2 187 aa29.88■■■□□ 2.37
CIRBP-208ENST00000586548 CGNL1Q0VF96 1302 aa29.87■■■□□ 2.37
CIRBP-208ENST00000586548 NSD2O96028 1365 aa29.87■■■□□ 2.37
CIRBP-208ENST00000586548 ADAMTSL3P82987 1691 aa29.86■■■□□ 2.37
CIRBP-208ENST00000586548 MED14O60244 1454 aa29.86■■■□□ 2.37
CIRBP-208ENST00000586548 WAPLQ7Z5K2 1190 aa29.86■■■□□ 2.37
CIRBP-208ENST00000586548 TXNDC2Q86VQ3 553 aa29.86■■■□□ 2.37
CIRBP-208ENST00000586548 CDK19Q9BWU1 502 aa29.86■■■□□ 2.37
CIRBP-208ENST00000586548 NEFLP07196 543 aa29.85■■■□□ 2.37
CIRBP-208ENST00000586548 SMG6Q86US8 1419 aaKnown RBP29.84■■■□□ 2.37
CIRBP-208ENST00000586548 PLPPR3Q6T4P5 718 aa29.84■■■□□ 2.37
CIRBP-208ENST00000586548 THEMISQ8N1K5 641 aaPredicted RBP29.84■■■□□ 2.37
CIRBP-208ENST00000586548 A0A1W2PP64 1363 aa29.83■■■□□ 2.37
CIRBP-208ENST00000586548 CEP170BQ9Y4F5 1589 aaPredicted RBP29.82■■■□□ 2.36
CIRBP-208ENST00000586548 CD163L1Q9NR16 1453 aa29.81■■■□□ 2.36
CIRBP-208ENST00000586548 TERF2IPQ9NYB0 399 aa29.81■■■□□ 2.36
CIRBP-208ENST00000586548 MORC1Q86VD1 984 aa29.8■■■□□ 2.36
CIRBP-208ENST00000586548 DIP2AQ14689 1571 aa29.8■■■□□ 2.36
CIRBP-208ENST00000586548 WDR43Q15061 677 aaKnown RBP eCLIP29.79■■■□□ 2.36
CIRBP-208ENST00000586548 FKBP8Q14318 412 aa29.78■■■□□ 2.36
CIRBP-208ENST00000586548 ATP7BP35670 1465 aa29.76■■■□□ 2.35
CIRBP-208ENST00000586548 POLR3AO14802 1390 aaPredicted RBP29.76■■■□□ 2.35
CIRBP-208ENST00000586548 NUDCQ9Y266 331 aa29.76■■■□□ 2.35
CIRBP-208ENST00000586548 ZNF142P52746 1687 aaPredicted RBP29.76■■■□□ 2.35
CIRBP-208ENST00000586548 ANKRD26Q9UPS8 1709 aa29.75■■■□□ 2.35
CIRBP-208ENST00000586548 ADAMTS8Q9UP79 889 aa29.75■■■□□ 2.35
CIRBP-208ENST00000586548 WASLO00401 505 aaPredicted RBP29.74■■■□□ 2.35
CIRBP-208ENST00000586548 ADGRB2O60241 1585 aa29.74■■■□□ 2.35
CIRBP-208ENST00000586548 HDGFL2Q7Z4V5 671 aaPredicted RBP29.74■■■□□ 2.35
CIRBP-208ENST00000586548 ROBO2Q9HCK4 1378 aa29.73■■■□□ 2.35
CIRBP-208ENST00000586548 TBX22Q9Y458 520 aa29.73■■■□□ 2.35
CIRBP-208ENST00000586548 CABP1Q9NZU7 370 aa29.71■■■□□ 2.35
CIRBP-208ENST00000586548 PTPRUQ92729 1446 aa29.7■■■□□ 2.35
CIRBP-208ENST00000586548 PDE3BQ13370 1112 aa29.7■■■□□ 2.34
CIRBP-208ENST00000586548 SENP3-EIF4A1A0A087X0R7 540 aa29.68■■■□□ 2.34
CIRBP-208ENST00000586548 SLC26A8Q96RN1 970 aa29.68■■■□□ 2.34
CIRBP-208ENST00000586548 KIF20BQ96Q89 1820 aa29.68■■■□□ 2.34
CIRBP-208ENST00000586548 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.66■■■□□ 2.34
CIRBP-208ENST00000586548 SETD1BQ9UPS6 1966 aaKnown RBP29.66■■■□□ 2.34
CIRBP-208ENST00000586548 SHPRHQ149N8 1683 aa29.66■■■□□ 2.34
CIRBP-208ENST00000586548 PTCH1Q13635 1447 aa29.65■■■□□ 2.34
CIRBP-208ENST00000586548 PPIP5K1Q6PFW1 1433 aa29.64■■■□□ 2.34
CIRBP-208ENST00000586548 CDC42BPGQ6DT37 1551 aa29.63■■■□□ 2.33
CIRBP-208ENST00000586548 TNNT2P45379 298 aaPredicted RBP29.62■■■□□ 2.33
CIRBP-208ENST00000586548 XRN1Q8IZH2 1706 aaKnown RBP29.62■■■□□ 2.33
CIRBP-208ENST00000586548 CPSF1Q10570 1443 aaKnown RBP29.62■■■□□ 2.33
CIRBP-208ENST00000586548 NUDT16Q96DE0 195 aaKnown RBP29.62■■■□□ 2.33
CIRBP-208ENST00000586548 FYB1O15117 783 aa29.61■■■□□ 2.33
CIRBP-208ENST00000586548 AMOTL2Q9Y2J4 779 aa29.6■■■□□ 2.33
CIRBP-208ENST00000586548 SALL2Q9Y467 1007 aaPredicted RBP29.6■■■□□ 2.33
CIRBP-208ENST00000586548 PIK3R4Q99570 1358 aa29.59■■■□□ 2.33
CIRBP-208ENST00000586548 CFAP53Q96M91 514 aa29.59■■■□□ 2.33
CIRBP-208ENST00000586548 CCDC61Q9Y6R9 512 aa29.59■■■□□ 2.33
CIRBP-208ENST00000586548 AKAP12Q02952 1782 aa29.58■■■□□ 2.33
CIRBP-208ENST00000586548 MON2Q7Z3U7 1717 aa29.58■■■□□ 2.33
CIRBP-208ENST00000586548 MTHFSP49914 203 aa29.58■■■□□ 2.33
CIRBP-208ENST00000586548 GGNBP2Q9H3C7 697 aa29.58■■■□□ 2.33
CIRBP-208ENST00000586548 ITSN1Q15811 1721 aa29.58■■■□□ 2.33
CIRBP-208ENST00000586548 EDC4Q6P2E9 1401 aaKnown RBP29.57■■■□□ 2.32
CIRBP-208ENST00000586548 TOPAZ1Q8N9V7 1692 aa29.57■■■□□ 2.32
CIRBP-208ENST00000586548 ERICH6BQ5W0A0 696 aa29.56■■■□□ 2.32
CIRBP-208ENST00000586548 PRR36Q9H6K5 1346 aa29.54■■■□□ 2.32
CIRBP-208ENST00000586548 ANKLE2Q86XL3 938 aa29.54■■■□□ 2.32
CIRBP-208ENST00000586548 RNF123Q5XPI4 1314 aa29.52■■■□□ 2.32
CIRBP-208ENST00000586548 NGEFQ8N5V2 710 aa29.51■■■□□ 2.31
CIRBP-208ENST00000586548 ZNF521Q96K83 1311 aa29.5■■■□□ 2.31
CIRBP-208ENST00000586548 KDM4FA0A1W2PPD8 638 aa29.49■■■□□ 2.31
CIRBP-208ENST00000586548 CCDC146Q8IYE0 955 aa29.49■■■□□ 2.31
CIRBP-208ENST00000586548 ZNF692Q9BU19 519 aaPredicted RBP29.48■■■□□ 2.31
CIRBP-208ENST00000586548 IRX6P78412 446 aaPredicted RBP29.47■■■□□ 2.31
CIRBP-208ENST00000586548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.47■■■□□ 2.31
CIRBP-208ENST00000586548 CDCA7LQ96GN5 454 aa29.47■■■□□ 2.31
CIRBP-208ENST00000586548 COL3A1P02461 1466 aaPredicted RBP29.47■■■□□ 2.31
CIRBP-208ENST00000586548 NCKAP5LQ9HCH0 1330 aa29.46■■■□□ 2.31
CIRBP-208ENST00000586548 CHD2O14647 1828 aaKnown RBP29.46■■■□□ 2.31
CIRBP-208ENST00000586548 PLEKHG3A1L390 1219 aa29.44■■■□□ 2.3
CIRBP-208ENST00000586548 APAF1O14727 1248 aa29.44■■■□□ 2.3
CIRBP-208ENST00000586548 NRKQ7Z2Y5 1582 aa29.44■■■□□ 2.3
CIRBP-208ENST00000586548 PELP1Q8IZL8 1130 aaKnown RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms