RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 SPDYE5A6NIY4 337 aa9.61□□□□□ -0.87
ZNF560-202ENST00000585974 CD2BP2O95400 341 aaKnown RBP9.61□□□□□ -0.87
ZNF560-202ENST00000585974 RETREG3Q86VR2 466 aa9.61□□□□□ -0.87
ZNF560-202ENST00000585974 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
ZNF560-202ENST00000585974 GFRA3O60609 400 aa9.6□□□□□ -0.87
ZNF560-202ENST00000585974 DXOO77932 396 aaKnown RBP9.6□□□□□ -0.87
ZNF560-202ENST00000585974 LIAT1Q6ZQX7 453 aa9.6□□□□□ -0.87
ZNF560-202ENST00000585974 FCF1Q9Y324 198 aaKnown RBP9.6□□□□□ -0.87
ZNF560-202ENST00000585974 EMID1Q96A84 441 aaPredicted RBP9.59□□□□□ -0.87
ZNF560-202ENST00000585974 ZBTB24O43167 697 aaPredicted RBP9.58□□□□□ -0.88
ZNF560-202ENST00000585974 MS4A1P11836 297 aa9.58□□□□□ -0.88
ZNF560-202ENST00000585974 PRR20EP86478 221 aa9.58□□□□□ -0.88
ZNF560-202ENST00000585974 PRR20CP86479 221 aa9.58□□□□□ -0.88
ZNF560-202ENST00000585974 PRR20DP86480 221 aa9.58□□□□□ -0.88
ZNF560-202ENST00000585974 PRR20BP86481 221 aa9.58□□□□□ -0.88
ZNF560-202ENST00000585974 PRR20AP86496 221 aa9.58□□□□□ -0.88
ZNF560-202ENST00000585974 TBC1D2Q9BYX2 928 aa9.58□□□□□ -0.88
ZNF560-202ENST00000585974 MOXD2PA6NHM9 499 aa9.57□□□□□ -0.88
ZNF560-202ENST00000585974 HLA-CQ95604 372 aa9.57□□□□□ -0.88
ZNF560-202ENST00000585974 PDZRN3Q9UPQ7 1066 aa9.57□□□□□ -0.88
ZNF560-202ENST00000585974 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
ZNF560-202ENST00000585974 SPTLC1O15269 473 aa9.56□□□□□ -0.88
ZNF560-202ENST00000585974 JUNDP17535 347 aa9.56□□□□□ -0.88
ZNF560-202ENST00000585974 TUSC1Q2TAM9 212 aa9.56□□□□□ -0.88
ZNF560-202ENST00000585974 PLA2G2CQ5R387 149 aa9.56□□□□□ -0.88
ZNF560-202ENST00000585974 ZNF697Q5TEC3 545 aa9.56□□□□□ -0.88
ZNF560-202ENST00000585974 PCDHGC3Q9UN70 934 aa9.56□□□□□ -0.88
ZNF560-202ENST00000585974 GUCA2AQ02747 115 aa9.55□□□□□ -0.88
ZNF560-202ENST00000585974 DESI1Q6ICB0 168 aa9.55□□□□□ -0.88
ZNF560-202ENST00000585974 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
ZNF560-202ENST00000585974 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
ZNF560-202ENST00000585974 PRDM9Q9NQV7 894 aa9.55□□□□□ -0.88
ZNF560-202ENST00000585974 NDUFV2P19404 249 aa9.54□□□□□ -0.88
ZNF560-202ENST00000585974 MTMR2Q13614 643 aa9.54□□□□□ -0.88
ZNF560-202ENST00000585974 PRPF38BQ5VTL8 546 aaKnown RBP9.54□□□□□ -0.88
ZNF560-202ENST00000585974 Q6ZNB5 142 aa9.53□□□□□ -0.88
ZNF560-202ENST00000585974 RIC3Q7Z5B4 369 aa9.52□□□□□ -0.89
ZNF560-202ENST00000585974 SYMPKQ92797 1274 aaKnown RBP9.52□□□□□ -0.89
ZNF560-202ENST00000585974 GDF9O60383 454 aa9.51□□□□□ -0.89
ZNF560-202ENST00000585974 TRIM67Q6ZTA4 783 aa9.5□□□□□ -0.89
ZNF560-202ENST00000585974 ZBTB3Q9H5J0 574 aa9.5□□□□□ -0.89
ZNF560-202ENST00000585974 DGAT1O75907 488 aa9.49□□□□□ -0.89
ZNF560-202ENST00000585974 PTPRNQ16849 979 aa9.49□□□□□ -0.89
ZNF560-202ENST00000585974 PRR7Q8TB68 274 aa9.49□□□□□ -0.89
ZNF560-202ENST00000585974 DDRGK1Q96HY6 314 aa9.49□□□□□ -0.89
ZNF560-202ENST00000585974 TRIM32Q13049 653 aa9.48□□□□□ -0.89
ZNF560-202ENST00000585974 MYSM1Q5VVJ2 828 aa9.48□□□□□ -0.89
ZNF560-202ENST00000585974 TRAF7Q6Q0C0 670 aa9.48□□□□□ -0.89
ZNF560-202ENST00000585974 NUDT12Q9BQG2 462 aa9.48□□□□□ -0.89
ZNF560-202ENST00000585974 WNT7BP56706 349 aa9.47□□□□□ -0.89
ZNF560-202ENST00000585974 CCDC24Q8N4L8 307 aa9.47□□□□□ -0.89
ZNF560-202ENST00000585974 CCNYL3P0C7X3 344 aa9.46□□□□□ -0.9
ZNF560-202ENST00000585974 KDM4CQ9H3R0 1056 aa9.46□□□□□ -0.9
ZNF560-202ENST00000585974 EVA1BQ9NVM1 165 aa9.46□□□□□ -0.9
ZNF560-202ENST00000585974 PKD2L1Q9P0L9 805 aa9.46□□□□□ -0.9
ZNF560-202ENST00000585974 PCDHB15Q9Y5E8 787 aa9.46□□□□□ -0.9
ZNF560-202ENST00000585974 WNT7AO00755 349 aa9.45□□□□□ -0.9
ZNF560-202ENST00000585974 HRCP23327 699 aa9.45□□□□□ -0.9
ZNF560-202ENST00000585974 LILRB3O75022 631 aa9.43□□□□□ -0.9
ZNF560-202ENST00000585974 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
ZNF560-202ENST00000585974 FOXC1Q12948 553 aa9.43□□□□□ -0.9
ZNF560-202ENST00000585974 PKDCCQ504Y2 493 aa9.43□□□□□ -0.9
ZNF560-202ENST00000585974 LYPD8Q6UX82 237 aa9.43□□□□□ -0.9
ZNF560-202ENST00000585974 KCNH2Q12809 1159 aa9.42□□□□□ -0.9
ZNF560-202ENST00000585974 SKIV2LQ15477 1246 aaKnown RBP9.42□□□□□ -0.9
ZNF560-202ENST00000585974 CYP4X1Q8N118 509 aa9.42□□□□□ -0.9
ZNF560-202ENST00000585974 LIMD1Q9UGP4 676 aa9.42□□□□□ -0.9
ZNF560-202ENST00000585974 NUTM2BA6NNL0 878 aaPredicted RBP9.41□□□□□ -0.9
ZNF560-202ENST00000585974 NUTM2EB1AL46 878 aaPredicted RBP9.41□□□□□ -0.9
ZNF560-202ENST00000585974 TNFRSF10AO00220 468 aa9.41□□□□□ -0.9
ZNF560-202ENST00000585974 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
ZNF560-202ENST00000585974 NUTM2DQ5VT03 806 aaPredicted RBP9.41□□□□□ -0.9
ZNF560-202ENST00000585974 NUTM2AQ8IVF1 878 aaPredicted RBP9.41□□□□□ -0.9
ZNF560-202ENST00000585974 TOR4AQ9NXH8 423 aa9.41□□□□□ -0.9
ZNF560-202ENST00000585974 SNIP1Q8TAD8 396 aaKnown RBP9.4□□□□□ -0.9
ZNF560-202ENST00000585974 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
ZNF560-202ENST00000585974 CFAP99D6REC4 459 aa9.39□□□□□ -0.91
ZNF560-202ENST00000585974 FAM187AA6NFU0 413 aa9.38□□□□□ -0.91
ZNF560-202ENST00000585974 PTCRAQ6ISU1 281 aaPredicted RBP9.38□□□□□ -0.91
ZNF560-202ENST00000585974 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
ZNF560-202ENST00000585974 CABLES1Q8TDN4 633 aa9.38□□□□□ -0.91
ZNF560-202ENST00000585974 FAM117AQ9C073 453 aa9.38□□□□□ -0.91
ZNF560-202ENST00000585974 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
ZNF560-202ENST00000585974 TTC24A2A3L6 582 aaPredicted RBP9.37□□□□□ -0.91
ZNF560-202ENST00000585974 QPCTQ16769 361 aa9.37□□□□□ -0.91
ZNF560-202ENST00000585974 CSPP1Q1MSJ5 1256 aa9.37□□□□□ -0.91
ZNF560-202ENST00000585974 RC3H1Q5TC82 1133 aaKnown RBP9.37□□□□□ -0.91
ZNF560-202ENST00000585974 UNC93B1Q9H1C4 597 aa9.37□□□□□ -0.91
ZNF560-202ENST00000585974 POLR3EQ9NVU0 708 aa9.37□□□□□ -0.91
ZNF560-202ENST00000585974 AVPP01185 164 aa9.35□□□□□ -0.91
ZNF560-202ENST00000585974 SKOR1P84550 965 aa9.35□□□□□ -0.91
ZNF560-202ENST00000585974 MYT1Q01538 1121 aa9.35□□□□□ -0.91
ZNF560-202ENST00000585974 PPP2R2DQ66LE6 453 aa9.35□□□□□ -0.91
ZNF560-202ENST00000585974 ARMC2Q8NEN0 867 aa9.35□□□□□ -0.91
ZNF560-202ENST00000585974 MRGPRX2Q96LB1 330 aa9.35□□□□□ -0.91
ZNF560-202ENST00000585974 LCE2BO14633 110 aa9.34□□□□□ -0.91
ZNF560-202ENST00000585974 F12P00748 615 aaPredicted RBP9.34□□□□□ -0.91
ZNF560-202ENST00000585974 CTHP32929 405 aa9.34□□□□□ -0.91
ZNF560-202ENST00000585974 CTC1Q2NKJ3 1217 aa9.34□□□□□ -0.91
ZNF560-202ENST00000585974 CRIPAKQ8N1N5 446 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms