RNA–Protein interactions for RNA: ENST00000585313.5

IFT20-215, Transcript of intraflagellar transport 20, humanhuman

APPRIS P4 TSL 3 BASIC

Gene IFT20, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-215ENST00000585313 USP32Q8NFA0 1604 aa22.73■■□□□ 1.23
IFT20-215ENST00000585313 PTCH1Q13635 1447 aa22.72■■□□□ 1.23
IFT20-215ENST00000585313 ANKLE2Q86XL3 938 aa22.71■■□□□ 1.23
IFT20-215ENST00000585313 ATAD2Q6PL18 1390 aa22.71■■□□□ 1.23
IFT20-215ENST00000585313 RALBP1Q15311 655 aa22.7■■□□□ 1.22
IFT20-215ENST00000585313 NPC1L1Q9UHC9 1359 aa22.7■■□□□ 1.22
IFT20-215ENST00000585313 CHD2O14647 1828 aaKnown RBP22.7■■□□□ 1.22
IFT20-215ENST00000585313 PTPRUQ92729 1446 aa22.69■■□□□ 1.22
IFT20-215ENST00000585313 PARD3Q8TEW0 1356 aa22.69■■□□□ 1.22
IFT20-215ENST00000585313 PLEKHH1Q9ULM0 1364 aa22.68■■□□□ 1.22
IFT20-215ENST00000585313 MINK1Q8N4C8 1332 aaPredicted RBP22.67■■□□□ 1.22
IFT20-215ENST00000585313 SAFB2Q14151 953 aaKnown RBP eCLIP22.67■■□□□ 1.22
IFT20-215ENST00000585313 ROBO2Q9HCK4 1378 aa22.65■■□□□ 1.22
IFT20-215ENST00000585313 SLC26A8Q96RN1 970 aa22.65■■□□□ 1.22
IFT20-215ENST00000585313 KNSTRNQ9Y448 316 aa22.65■■□□□ 1.22
IFT20-215ENST00000585313 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.65■■□□□ 1.22
IFT20-215ENST00000585313 NPHP4O75161 1426 aaPredicted RBP22.64■■□□□ 1.21
IFT20-215ENST00000585313 ANKRD36BQ8N2N9 1353 aa22.63■■□□□ 1.21
IFT20-215ENST00000585313 MYBBP1AQ9BQG0 1328 aaKnown RBP22.63■■□□□ 1.21
IFT20-215ENST00000585313 WAPLQ7Z5K2 1190 aa22.63■■□□□ 1.21
IFT20-215ENST00000585313 CENPBP07199 599 aaPredicted RBP22.61■■□□□ 1.21
IFT20-215ENST00000585313 SRPK2P78362 688 aaKnown RBP22.61■■□□□ 1.21
IFT20-215ENST00000585313 CABP2Q9NPB3 220 aa22.61■■□□□ 1.21
IFT20-215ENST00000585313 AMER1Q5JTC6 1135 aaPredicted RBP22.6■■□□□ 1.21
IFT20-215ENST00000585313 YTHDC1Q96MU7 727 aaKnown RBP22.6■■□□□ 1.21
IFT20-215ENST00000585313 BRD4O60885 1362 aaPredicted RBP22.6■■□□□ 1.21
IFT20-215ENST00000585313 NWD1Q149M9 1564 aa22.59■■□□□ 1.21
IFT20-215ENST00000585313 TOPAZ1Q8N9V7 1692 aa22.59■■□□□ 1.21
IFT20-215ENST00000585313 CDK19Q9BWU1 502 aa22.59■■□□□ 1.21
IFT20-215ENST00000585313 AMOTL2Q9Y2J4 779 aa22.59■■□□□ 1.21
IFT20-215ENST00000585313 ATP7BP35670 1465 aa22.59■■□□□ 1.21
IFT20-215ENST00000585313 TMC1Q8TDI8 760 aa22.58■■□□□ 1.21
IFT20-215ENST00000585313 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
IFT20-215ENST00000585313 ANKRD26Q9UPS8 1709 aa22.57■■□□□ 1.2
IFT20-215ENST00000585313 WASLO00401 505 aaPredicted RBP22.57■■□□□ 1.2
IFT20-215ENST00000585313 SLC12A5Q9H2X9 1139 aa22.57■■□□□ 1.2
IFT20-215ENST00000585313 MRS2Q9HD23 443 aa22.57■■□□□ 1.2
IFT20-215ENST00000585313 ITSN1Q15811 1721 aa22.57■■□□□ 1.2
IFT20-215ENST00000585313 KDM4FA0A1W2PPD8 638 aa22.56■■□□□ 1.2
IFT20-215ENST00000585313 AKAP12Q02952 1782 aa22.55■■□□□ 1.2
IFT20-215ENST00000585313 CARD14Q9BXL6 1004 aa22.55■■□□□ 1.2
IFT20-215ENST00000585313 CD163L1Q9NR16 1453 aa22.54■■□□□ 1.2
IFT20-215ENST00000585313 NSD2O96028 1365 aa22.54■■□□□ 1.2
IFT20-215ENST00000585313 NLRP13Q86W25 1043 aa22.54■■□□□ 1.2
IFT20-215ENST00000585313 KIF20BQ96Q89 1820 aa22.54■■□□□ 1.2
IFT20-215ENST00000585313 CC2D1BQ5T0F9 858 aaKnown RBP22.53■■□□□ 1.2
IFT20-215ENST00000585313 CDC42BPGQ6DT37 1551 aa22.53■■□□□ 1.2
IFT20-215ENST00000585313 MON2Q7Z3U7 1717 aa22.53■■□□□ 1.2
IFT20-215ENST00000585313 A0A1W2PP64 1363 aa22.52■■□□□ 1.2
IFT20-215ENST00000585313 TERF2IPQ9NYB0 399 aa22.52■■□□□ 1.2
IFT20-215ENST00000585313 CCDC184Q52MB2 194 aa22.51■■□□□ 1.19
IFT20-215ENST00000585313 NALCNQ8IZF0 1738 aa22.51■■□□□ 1.19
IFT20-215ENST00000585313 FMN2Q9NZ56 1722 aa22.51■■□□□ 1.19
IFT20-215ENST00000585313 CNGB1Q14028 1251 aaPredicted RBP22.5■■□□□ 1.19
IFT20-215ENST00000585313 CGNL1Q0VF96 1302 aa22.5■■□□□ 1.19
IFT20-215ENST00000585313 LMTK3Q96Q04 1460 aa22.49■■□□□ 1.19
IFT20-215ENST00000585313 PPIP5K1Q6PFW1 1433 aa22.48■■□□□ 1.19
IFT20-215ENST00000585313 KCNA6P17658 529 aa22.48■■□□□ 1.19
IFT20-215ENST00000585313 HDGFL2Q7Z4V5 671 aaPredicted RBP22.48■■□□□ 1.19
IFT20-215ENST00000585313 NCKAP5LQ9HCH0 1330 aa22.48■■□□□ 1.19
IFT20-215ENST00000585313 NKTRP30414 1462 aaKnown RBP22.47■■□□□ 1.19
IFT20-215ENST00000585313 CPSF1Q10570 1443 aaKnown RBP22.46■■□□□ 1.19
IFT20-215ENST00000585313 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
IFT20-215ENST00000585313 ANKARQ7Z5J8 1434 aa22.45■■□□□ 1.18
IFT20-215ENST00000585313 CCDC61Q9Y6R9 512 aa22.44■■□□□ 1.18
IFT20-215ENST00000585313 STRCQ7RTU9 1775 aa22.43■■□□□ 1.18
IFT20-215ENST00000585313 CABP1Q9NZU7 370 aa22.43■■□□□ 1.18
IFT20-215ENST00000585313 RGPD8O14715 1765 aaPredicted RBP22.43■■□□□ 1.18
IFT20-215ENST00000585313 NRKQ7Z2Y5 1582 aa22.42■■□□□ 1.18
IFT20-215ENST00000585313 EDC4Q6P2E9 1401 aaKnown RBP22.42■■□□□ 1.18
IFT20-215ENST00000585313 PPP2R1AP30153 589 aa22.42■■□□□ 1.18
IFT20-215ENST00000585313 ADGRL3Q9HAR2 1447 aa22.41■■□□□ 1.18
IFT20-215ENST00000585313 INSRP06213 1382 aa22.41■■□□□ 1.18
IFT20-215ENST00000585313 PRR36Q9H6K5 1346 aa22.41■■□□□ 1.18
IFT20-215ENST00000585313 PNISRQ8TF01 805 aaKnown RBP22.41■■□□□ 1.18
IFT20-215ENST00000585313 FAM9BQ8IZU0 186 aa22.38■■□□□ 1.17
IFT20-215ENST00000585313 PLEKHG3A1L390 1219 aa22.37■■□□□ 1.17
IFT20-215ENST00000585313 MORC1Q86VD1 984 aa22.37■■□□□ 1.17
IFT20-215ENST00000585313 STRCP1A6NGW2 1772 aa22.37■■□□□ 1.17
IFT20-215ENST00000585313 ZNF692Q9BU19 519 aaPredicted RBP22.36■■□□□ 1.17
IFT20-215ENST00000585313 NCOA3Q9Y6Q9 1424 aa22.32■■□□□ 1.16
IFT20-215ENST00000585313 HSPA2P54652 639 aa22.32■■□□□ 1.16
IFT20-215ENST00000585313 HNRNPUQ00839 825 aaKnown RBP eCLIP22.32■■□□□ 1.16
IFT20-215ENST00000585313 POLR3AO14802 1390 aaPredicted RBP22.32■■□□□ 1.16
IFT20-215ENST00000585313 USP6P35125 1406 aa22.31■■□□□ 1.16
IFT20-215ENST00000585313 FYB1O15117 783 aa22.3■■□□□ 1.16
IFT20-215ENST00000585313 SHPRHQ149N8 1683 aa22.3■■□□□ 1.16
IFT20-215ENST00000585313 BLMP54132 1417 aaPredicted RBP22.29■■□□□ 1.16
IFT20-215ENST00000585313 ACEP12821 1306 aa22.28■■□□□ 1.16
IFT20-215ENST00000585313 USP54Q70EL1 1684 aa22.27■■□□□ 1.16
IFT20-215ENST00000585313 ZBED9Q6R2W3 1325 aa22.27■■□□□ 1.16
IFT20-215ENST00000585313 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
IFT20-215ENST00000585313 DCCP43146 1447 aa22.26■■□□□ 1.15
IFT20-215ENST00000585313 SSH2Q76I76 1423 aa22.26■■□□□ 1.15
IFT20-215ENST00000585313 MAP2P11137 1827 aaKnown RBP22.25■■□□□ 1.15
IFT20-215ENST00000585313 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
IFT20-215ENST00000585313 GGNBP2Q9H3C7 697 aa22.25■■□□□ 1.15
IFT20-215ENST00000585313 KIF1AQ12756 1690 aa22.25■■□□□ 1.15
IFT20-215ENST00000585313 XIRP1Q702N8 1843 aaKnown RBP22.24■■□□□ 1.15
IFT20-215ENST00000585313 TTC21AQ8NDW8 1320 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms