RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 DIXDC1Q155Q3 683 aa9.79□□□□□ -0.84
CRLF3-206ENST00000585268 BRICD5Q6PL45 260 aa9.79□□□□□ -0.84
CRLF3-206ENST00000585268 PCDHGC3Q9UN70 934 aa9.79□□□□□ -0.84
CRLF3-206ENST00000585268 FDX1P10109 184 aa9.78□□□□□ -0.84
CRLF3-206ENST00000585268 Q3C1V9 767 aa9.78□□□□□ -0.84
CRLF3-206ENST00000585268 S1PR4O95977 384 aa9.77□□□□□ -0.85
CRLF3-206ENST00000585268 MYSM1Q5VVJ2 828 aa9.77□□□□□ -0.85
CRLF3-206ENST00000585268 RSBN1LQ6PCB5 846 aaPredicted RBP9.77□□□□□ -0.85
CRLF3-206ENST00000585268 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
CRLF3-206ENST00000585268 FAM160A2Q8N612 972 aaPredicted RBP9.76□□□□□ -0.85
CRLF3-206ENST00000585268 DDRGK1Q96HY6 314 aa9.76□□□□□ -0.85
CRLF3-206ENST00000585268 SLC6A16Q9GZN6 736 aa9.76□□□□□ -0.85
CRLF3-206ENST00000585268 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
CRLF3-206ENST00000585268 GJA5P36382 358 aa9.75□□□□□ -0.85
CRLF3-206ENST00000585268 PRDM9Q9NQV7 894 aa9.75□□□□□ -0.85
CRLF3-206ENST00000585268 RNF223E7ERA6 249 aa9.74□□□□□ -0.85
CRLF3-206ENST00000585268 SPTLC1O15269 473 aa9.74□□□□□ -0.85
CRLF3-206ENST00000585268 GGCXP38435 758 aa9.74□□□□□ -0.85
CRLF3-206ENST00000585268 MSS51Q4VC12 460 aa9.74□□□□□ -0.85
CRLF3-206ENST00000585268 SYMPKQ92797 1274 aaKnown RBP9.74□□□□□ -0.85
CRLF3-206ENST00000585268 RIC3Q7Z5B4 369 aa9.73□□□□□ -0.85
CRLF3-206ENST00000585268 USB1Q9BQ65 265 aaKnown RBP9.73□□□□□ -0.85
CRLF3-206ENST00000585268 LIMD1Q9UGP4 676 aa9.73□□□□□ -0.85
CRLF3-206ENST00000585268 PCDHB15Q9Y5E8 787 aa9.72□□□□□ -0.85
CRLF3-206ENST00000585268 PPEF1O14829 653 aaPredicted RBP9.71□□□□□ -0.86
CRLF3-206ENST00000585268 RETREG3Q86VR2 466 aa9.71□□□□□ -0.86
CRLF3-206ENST00000585268 RSPH6AQ9H0K4 717 aa9.71□□□□□ -0.86
CRLF3-206ENST00000585268 C6orf229H3BNL8 230 aa9.7□□□□□ -0.86
CRLF3-206ENST00000585268 CLK2P49760 499 aaKnown RBP9.7□□□□□ -0.86
CRLF3-206ENST00000585268 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
CRLF3-206ENST00000585268 ANKLE1Q8NAG6 615 aa9.7□□□□□ -0.86
CRLF3-206ENST00000585268 MTMR2Q13614 643 aa9.69□□□□□ -0.86
CRLF3-206ENST00000585268 TUSC1Q2TAM9 212 aa9.69□□□□□ -0.86
CRLF3-206ENST00000585268 MMP16P51512 607 aa9.68□□□□□ -0.86
CRLF3-206ENST00000585268 POLR3EQ9NVU0 708 aa9.68□□□□□ -0.86
CRLF3-206ENST00000585268 DXOO77932 396 aaKnown RBP9.67□□□□□ -0.86
CRLF3-206ENST00000585268 HRCP23327 699 aa9.67□□□□□ -0.86
CRLF3-206ENST00000585268 SKIV2LQ15477 1246 aaKnown RBP9.67□□□□□ -0.86
CRLF3-206ENST00000585268 QPCTQ16769 361 aa9.67□□□□□ -0.86
CRLF3-206ENST00000585268 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
CRLF3-206ENST00000585268 PRPF38BQ5VTL8 546 aaKnown RBP9.67□□□□□ -0.86
CRLF3-206ENST00000585268 ZBTB3Q9H5J0 574 aa9.67□□□□□ -0.86
CRLF3-206ENST00000585268 SPDYE5A6NIY4 337 aa9.66□□□□□ -0.86
CRLF3-206ENST00000585268 PLA2G2CQ5R387 149 aa9.66□□□□□ -0.86
CRLF3-206ENST00000585268 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
CRLF3-206ENST00000585268 CABLES1Q8TDN4 633 aa9.66□□□□□ -0.86
CRLF3-206ENST00000585268 EMID1Q96A84 441 aaPredicted RBP9.66□□□□□ -0.86
CRLF3-206ENST00000585268 FCF1Q9Y324 198 aaKnown RBP9.66□□□□□ -0.86
CRLF3-206ENST00000585268 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
CRLF3-206ENST00000585268 JUNDP17535 347 aa9.65□□□□□ -0.86
CRLF3-206ENST00000585268 PRR7Q8TB68 274 aa9.65□□□□□ -0.86
CRLF3-206ENST00000585268 LILRB3O75022 631 aa9.64□□□□□ -0.87
CRLF3-206ENST00000585268 PRKD2Q9BZL6 878 aa9.64□□□□□ -0.87
CRLF3-206ENST00000585268 CFAP99D6REC4 459 aa9.63□□□□□ -0.87
CRLF3-206ENST00000585268 PROCA1Q8NCQ7 364 aaPredicted RBP9.63□□□□□ -0.87
CRLF3-206ENST00000585268 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
CRLF3-206ENST00000585268 IRX2Q9BZI1 471 aaPredicted RBP9.63□□□□□ -0.87
CRLF3-206ENST00000585268 GOPCQ9HD26 462 aa9.62□□□□□ -0.87
CRLF3-206ENST00000585268 V9GY48 417 aaPredicted RBP9.62□□□□□ -0.87
CRLF3-206ENST00000585268 FBXO31Q5XUX0 539 aaPredicted RBP9.61□□□□□ -0.87
CRLF3-206ENST00000585268 DESI1Q6ICB0 168 aa9.61□□□□□ -0.87
CRLF3-206ENST00000585268 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
CRLF3-206ENST00000585268 LIAT1Q6ZQX7 453 aa9.6□□□□□ -0.87
CRLF3-206ENST00000585268 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
CRLF3-206ENST00000585268 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
CRLF3-206ENST00000585268 SLC19A1P41440 591 aa9.59□□□□□ -0.87
CRLF3-206ENST00000585268 NUTM2DQ5VT03 806 aaPredicted RBP9.59□□□□□ -0.87
CRLF3-206ENST00000585268 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
CRLF3-206ENST00000585268 PTPRNQ16849 979 aa9.58□□□□□ -0.88
CRLF3-206ENST00000585268 NUDT12Q9BQG2 462 aa9.58□□□□□ -0.88
CRLF3-206ENST00000585268 PPP2R2DQ66LE6 453 aa9.57□□□□□ -0.88
CRLF3-206ENST00000585268 CCNYL3P0C7X3 344 aa9.56□□□□□ -0.88
CRLF3-206ENST00000585268 SPRYD7Q5W111 196 aa9.56□□□□□ -0.88
CRLF3-206ENST00000585268 PCMTD1Q96MG8 357 aaPredicted RBP9.56□□□□□ -0.88
CRLF3-206ENST00000585268 RPIAP49247 311 aa9.55□□□□□ -0.88
CRLF3-206ENST00000585268 LYPD8Q6UX82 237 aa9.55□□□□□ -0.88
CRLF3-206ENST00000585268 CCDC24Q8N4L8 307 aa9.55□□□□□ -0.88
CRLF3-206ENST00000585268 TSC1Q92574 1164 aa9.55□□□□□ -0.88
CRLF3-206ENST00000585268 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
CRLF3-206ENST00000585268 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
CRLF3-206ENST00000585268 PTCRAQ6ISU1 281 aaPredicted RBP9.53□□□□□ -0.88
CRLF3-206ENST00000585268 HELBQ8NG08 1087 aaPredicted RBP9.53□□□□□ -0.88
CRLF3-206ENST00000585268 EIF4G1Q04637 1599 aaKnown RBP9.53□□□□□ -0.88
CRLF3-206ENST00000585268 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
CRLF3-206ENST00000585268 F12P00748 615 aaPredicted RBP9.52□□□□□ -0.89
CRLF3-206ENST00000585268 ZNF598Q86UK7 904 aaKnown RBP9.52□□□□□ -0.89
CRLF3-206ENST00000585268 EVA1BQ9NVM1 165 aa9.52□□□□□ -0.89
CRLF3-206ENST00000585268 RFC5P40937 340 aa9.51□□□□□ -0.89
CRLF3-206ENST00000585268 TRIM32Q13049 653 aa9.51□□□□□ -0.89
CRLF3-206ENST00000585268 LAPTM4AQ15012 233 aa9.51□□□□□ -0.89
CRLF3-206ENST00000585268 ZNF697Q5TEC3 545 aa9.51□□□□□ -0.89
CRLF3-206ENST00000585268 KCNH2Q12809 1159 aa9.5□□□□□ -0.89
CRLF3-206ENST00000585268 MAP10Q9P2G4 905 aa9.5□□□□□ -0.89
CRLF3-206ENST00000585268 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
CRLF3-206ENST00000585268 TRIM67Q6ZTA4 783 aa9.49□□□□□ -0.89
CRLF3-206ENST00000585268 UNC93B1Q9H1C4 597 aa9.49□□□□□ -0.89
CRLF3-206ENST00000585268 CC2D2AQ9P2K1 1620 aa9.49□□□□□ -0.89
CRLF3-206ENST00000585268 CECR2Q9BXF3 1484 aa9.48□□□□□ -0.89
CRLF3-206ENST00000585268 CD2BP2O95400 341 aaKnown RBP9.48□□□□□ -0.89
CRLF3-206ENST00000585268 GFRA3O60609 400 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms