RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 CDC42BPGQ6DT37 1551 aa30.19■■■□□ 2.42
TOP3A-219ENST00000584887 AFF2P51816 1311 aa30.19■■■□□ 2.42
TOP3A-219ENST00000584887 C8orf37Q96NL8 207 aa30.18■■■□□ 2.42
TOP3A-219ENST00000584887 TECPR2O15040 1411 aa30.17■■■□□ 2.42
TOP3A-219ENST00000584887 ESCO1Q5FWF5 840 aa30.17■■■□□ 2.42
TOP3A-219ENST00000584887 ABCC11Q96J66 1382 aa30.15■■■□□ 2.42
TOP3A-219ENST00000584887 NUTM2FA1L443 756 aa30.15■■■□□ 2.42
TOP3A-219ENST00000584887 SOS2Q07890 1332 aaPredicted RBP30.15■■■□□ 2.42
TOP3A-219ENST00000584887 PLEKHH1Q9ULM0 1364 aa30.15■■■□□ 2.42
TOP3A-219ENST00000584887 LAMC1P11047 1609 aa30.14■■■□□ 2.42
TOP3A-219ENST00000584887 ADAMTS2O95450 1211 aa30.14■■■□□ 2.42
TOP3A-219ENST00000584887 YTHDC2Q9H6S0 1430 aaKnown RBP30.13■■■□□ 2.41
TOP3A-219ENST00000584887 RXRBP28702 533 aa30.13■■■□□ 2.41
TOP3A-219ENST00000584887 KNDC1Q76NI1 1749 aa30.13■■■□□ 2.41
TOP3A-219ENST00000584887 CFAP70Q5T0N1 1121 aa30.1■■■□□ 2.41
TOP3A-219ENST00000584887 NPHP3Q7Z494 1330 aa30.1■■■□□ 2.41
TOP3A-219ENST00000584887 MYOM2P54296 1465 aa30.09■■■□□ 2.41
TOP3A-219ENST00000584887 XPCQ01831 940 aaPredicted RBP30.09■■■□□ 2.41
TOP3A-219ENST00000584887 C14orf93Q9H972 538 aaKnown RBP30.09■■■□□ 2.41
TOP3A-219ENST00000584887 NGLY1Q96IV0 654 aa30.07■■■□□ 2.4
TOP3A-219ENST00000584887 NRXN1Q9ULB1 1477 aa30.06■■■□□ 2.4
TOP3A-219ENST00000584887 FOXO3O43524 673 aa30.06■■■□□ 2.4
TOP3A-219ENST00000584887 DHX57Q6P158 1386 aaKnown RBP30.05■■■□□ 2.4
TOP3A-219ENST00000584887 SAFB2Q14151 953 aaKnown RBP eCLIP30.03■■■□□ 2.4
TOP3A-219ENST00000584887 PXDNQ92626 1479 aa30.02■■■□□ 2.4
TOP3A-219ENST00000584887 QTRT2Q9H974 415 aaKnown RBP30.02■■■□□ 2.4
TOP3A-219ENST00000584887 FMN2Q9NZ56 1722 aa30.01■■■□□ 2.39
TOP3A-219ENST00000584887 SIRT1Q96EB6 747 aa29.99■■■□□ 2.39
TOP3A-219ENST00000584887 KDM2AQ9Y2K7 1162 aa29.99■■■□□ 2.39
TOP3A-219ENST00000584887 PRAM1Q96QH2 718 aa29.98■■■□□ 2.39
TOP3A-219ENST00000584887 CDK12Q9NYV4 1490 aaPredicted RBP29.98■■■□□ 2.39
TOP3A-219ENST00000584887 POGKQ9P215 609 aa29.97■■■□□ 2.39
TOP3A-219ENST00000584887 COL22A1Q8NFW1 1626 aaPredicted RBP29.96■■■□□ 2.39
TOP3A-219ENST00000584887 RBM6P78332 1123 aaKnown RBP29.96■■■□□ 2.39
TOP3A-219ENST00000584887 USP21Q9UK80 565 aa29.95■■■□□ 2.39
TOP3A-219ENST00000584887 DCAF11Q8TEB1 546 aa29.94■■■□□ 2.38
TOP3A-219ENST00000584887 KIF1AQ12756 1690 aa29.93■■■□□ 2.38
TOP3A-219ENST00000584887 UPF1Q92900 1129 aaKnown RBP eCLIP29.93■■■□□ 2.38
TOP3A-219ENST00000584887 RGS12O14924 1447 aa29.92■■■□□ 2.38
TOP3A-219ENST00000584887 HRCP23327 699 aa29.9■■■□□ 2.38
TOP3A-219ENST00000584887 PHF8Q9UPP1 1060 aa29.9■■■□□ 2.38
TOP3A-219ENST00000584887 TRAK1Q9UPV9 953 aa29.9■■■□□ 2.38
TOP3A-219ENST00000584887 KRT28Q7Z3Y7 464 aa29.89■■■□□ 2.38
TOP3A-219ENST00000584887 DLC1Q96QB1 1528 aa29.89■■■□□ 2.38
TOP3A-219ENST00000584887 TRPC5Q9UL62 973 aaPredicted RBP29.88■■■□□ 2.37
TOP3A-219ENST00000584887 RGPD8O14715 1765 aaPredicted RBP29.87■■■□□ 2.37
TOP3A-219ENST00000584887 ADGRB1O14514 1584 aa29.87■■■□□ 2.37
TOP3A-219ENST00000584887 FNBP4Q8N3X1 1017 aaPredicted RBP29.86■■■□□ 2.37
TOP3A-219ENST00000584887 SPATA31A3Q5VYP0 1347 aa29.86■■■□□ 2.37
TOP3A-219ENST00000584887 PLEKHG5O94827 1062 aa29.85■■■□□ 2.37
TOP3A-219ENST00000584887 HIRIP3Q9BW71 556 aaPredicted RBP29.85■■■□□ 2.37
TOP3A-219ENST00000584887 MINK1Q8N4C8 1332 aaPredicted RBP29.83■■■□□ 2.37
TOP3A-219ENST00000584887 PSME1Q06323 249 aa29.82■■■□□ 2.36
TOP3A-219ENST00000584887 ATRNO75882 1429 aa29.81■■■□□ 2.36
TOP3A-219ENST00000584887 HAP1P54257 671 aaPredicted RBP29.81■■■□□ 2.36
TOP3A-219ENST00000584887 LMOD2Q6P5Q4 547 aa29.81■■■□□ 2.36
TOP3A-219ENST00000584887 MARF1Q9Y4F3 1742 aaKnown RBP29.81■■■□□ 2.36
TOP3A-219ENST00000584887 PMFBP1Q8TBY8 1022 aa29.8■■■□□ 2.36
TOP3A-219ENST00000584887 TNS3Q68CZ2 1445 aa29.79■■■□□ 2.36
TOP3A-219ENST00000584887 STAC3Q96MF2 364 aa29.79■■■□□ 2.36
TOP3A-219ENST00000584887 ANKARQ7Z5J8 1434 aa29.79■■■□□ 2.36
TOP3A-219ENST00000584887 ADGRB2O60241 1585 aa29.78■■■□□ 2.36
TOP3A-219ENST00000584887 BCL9LQ86UU0 1499 aa29.77■■■□□ 2.36
TOP3A-219ENST00000584887 USP32Q8NFA0 1604 aa29.76■■■□□ 2.35
TOP3A-219ENST00000584887 CABLES1Q8TDN4 633 aa29.75■■■□□ 2.35
TOP3A-219ENST00000584887 SBNO1A3KN83 1393 aa29.74■■■□□ 2.35
TOP3A-219ENST00000584887 EIF3AQ14152 1382 aaKnown RBP29.74■■■□□ 2.35
TOP3A-219ENST00000584887 ARHGEF10O15013 1369 aa29.71■■■□□ 2.35
TOP3A-219ENST00000584887 ATAD2Q6PL18 1390 aa29.71■■■□□ 2.35
TOP3A-219ENST00000584887 PRR36Q9H6K5 1346 aa29.71■■■□□ 2.35
TOP3A-219ENST00000584887 WASLO00401 505 aaPredicted RBP29.7■■■□□ 2.35
TOP3A-219ENST00000584887 TULP4Q9NRJ4 1543 aa29.7■■■□□ 2.34
TOP3A-219ENST00000584887 UNC5CLQ8IV45 518 aa29.69■■■□□ 2.34
TOP3A-219ENST00000584887 GJD4Q96KN9 370 aaPredicted RBP29.69■■■□□ 2.34
TOP3A-219ENST00000584887 GPRASP1Q5JY77 1395 aa29.68■■■□□ 2.34
TOP3A-219ENST00000584887 SLIT2O94813 1529 aa29.67■■■□□ 2.34
TOP3A-219ENST00000584887 ARHGEF28Q8N1W1 1705 aaKnown RBP29.67■■■□□ 2.34
TOP3A-219ENST00000584887 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.65■■■□□ 2.34
TOP3A-219ENST00000584887 NGDNQ8NEJ9 315 aaKnown RBP29.65■■■□□ 2.34
TOP3A-219ENST00000584887 ABCA3Q99758 1704 aa29.62■■■□□ 2.33
TOP3A-219ENST00000584887 RALGAPBQ86X10 1494 aa29.62■■■□□ 2.33
TOP3A-219ENST00000584887 CCDC9Q9Y3X0 531 aaKnown RBP29.61■■■□□ 2.33
TOP3A-219ENST00000584887 TRPM3Q9HCF6 1732 aaPredicted RBP29.6■■■□□ 2.33
TOP3A-219ENST00000584887 PAK3O75914 559 aaPredicted RBP29.6■■■□□ 2.33
TOP3A-219ENST00000584887 GLI3P10071 1580 aa29.58■■■□□ 2.33
TOP3A-219ENST00000584887 PLCH1Q4KWH8 1693 aa29.58■■■□□ 2.33
TOP3A-219ENST00000584887 NUDT16Q96DE0 195 aaKnown RBP29.58■■■□□ 2.33
TOP3A-219ENST00000584887 ATP7BP35670 1465 aa29.56■■■□□ 2.32
TOP3A-219ENST00000584887 NBPF1Q3BBV0 1214 aa29.56■■■□□ 2.32
TOP3A-219ENST00000584887 KIAA1210Q9ULL0 1709 aa29.56■■■□□ 2.32
TOP3A-219ENST00000584887 FAM83GA6ND36 823 aa29.55■■■□□ 2.32
TOP3A-219ENST00000584887 CDK19Q9BWU1 502 aa29.55■■■□□ 2.32
TOP3A-219ENST00000584887 ITSN1Q15811 1721 aa29.54■■■□□ 2.32
TOP3A-219ENST00000584887 ALS2Q96Q42 1657 aa29.54■■■□□ 2.32
TOP3A-219ENST00000584887 VPS72Q15906 364 aa29.54■■■□□ 2.32
TOP3A-219ENST00000584887 NWD2Q9ULI1 1742 aa29.53■■■□□ 2.32
TOP3A-219ENST00000584887 SEPT12Q8IYM1 358 aa29.49■■■□□ 2.31
TOP3A-219ENST00000584887 A0A0G2JS52 829 aa29.48■■■□□ 2.31
TOP3A-219ENST00000584887 MYT1Q01538 1121 aa29.48■■■□□ 2.31
TOP3A-219ENST00000584887 BTG4Q9NY30 223 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 356.9 ms