RNA–Protein interactions for RNA: ENST00000584632.5

CDK12-209, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-209ENST00000584632 PLA2R1Q13018 1463 aa16.86■□□□□ 0.29
CDK12-209ENST00000584632 WDR7Q9Y4E6 1490 aa16.86■□□□□ 0.29
CDK12-209ENST00000584632 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
CDK12-209ENST00000584632 POLR3AO14802 1390 aaPredicted RBP16.85■□□□□ 0.29
CDK12-209ENST00000584632 EVC2Q86UK5 1308 aa16.85■□□□□ 0.29
CDK12-209ENST00000584632 SRPK2P78362 688 aaKnown RBP16.85■□□□□ 0.29
CDK12-209ENST00000584632 SLC12A5Q9H2X9 1139 aa16.84■□□□□ 0.29
CDK12-209ENST00000584632 ABCA8O94911 1581 aa16.84■□□□□ 0.29
CDK12-209ENST00000584632 MSNP26038 577 aaKnown RBP16.83■□□□□ 0.28
CDK12-209ENST00000584632 KIF16BQ96L93 1317 aa16.83■□□□□ 0.28
CDK12-209ENST00000584632 NSD3Q9BZ95 1437 aa16.83■□□□□ 0.28
CDK12-209ENST00000584632 CASC1Q6TDU7 716 aa16.82■□□□□ 0.28
CDK12-209ENST00000584632 ABCC2Q92887 1545 aa16.82■□□□□ 0.28
CDK12-209ENST00000584632 EXOSC9Q06265 439 aaKnown RBP16.81■□□□□ 0.28
CDK12-209ENST00000584632 CALD1Q05682 793 aaKnown RBP16.81■□□□□ 0.28
CDK12-209ENST00000584632 GRPEL1Q9HAV7 217 aa16.81■□□□□ 0.28
CDK12-209ENST00000584632 LAMC1P11047 1609 aa16.81■□□□□ 0.28
CDK12-209ENST00000584632 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
CDK12-209ENST00000584632 SAFB2Q14151 953 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDK12-209ENST00000584632 ATF7IPQ6VMQ6 1270 aa16.8■□□□□ 0.28
CDK12-209ENST00000584632 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDK12-209ENST00000584632 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.283e-6■■□□□ 14.4
CDK12-209ENST00000584632 LNPKQ9C0E8 428 aa16.8■□□□□ 0.28
CDK12-209ENST00000584632 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
CDK12-209ENST00000584632 SYNMO15061 1565 aa16.79■□□□□ 0.28
CDK12-209ENST00000584632 SAMD9LQ8IVG5 1584 aa16.79■□□□□ 0.28
CDK12-209ENST00000584632 ANKRD45Q5TZF3 282 aa16.79■□□□□ 0.28
CDK12-209ENST00000584632 CARD14Q9BXL6 1004 aa16.79■□□□□ 0.28
CDK12-209ENST00000584632 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
CDK12-209ENST00000584632 CIZ1Q9ULV3 898 aaPredicted RBP16.79■□□□□ 0.28
CDK12-209ENST00000584632 CCDC27Q2M243 656 aa16.79■□□□□ 0.28
CDK12-209ENST00000584632 MAST1Q9Y2H9 1570 aa16.79■□□□□ 0.28
CDK12-209ENST00000584632 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
CDK12-209ENST00000584632 GGT6Q6P531 493 aa16.78■□□□□ 0.28
CDK12-209ENST00000584632 ATP10AO60312 1499 aa16.78■□□□□ 0.28
CDK12-209ENST00000584632 TSR2Q969E8 191 aaKnown RBP16.78■□□□□ 0.28
CDK12-209ENST00000584632 RLBP1P12271 317 aa16.78■□□□□ 0.28
CDK12-209ENST00000584632 RIPK4P57078 832 aa16.78■□□□□ 0.28
CDK12-209ENST00000584632 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.28
CDK12-209ENST00000584632 HDGFL2Q7Z4V5 671 aaPredicted RBP16.77■□□□□ 0.27
CDK12-209ENST00000584632 USP19O94966 1318 aa16.77■□□□□ 0.27
CDK12-209ENST00000584632 DDX49Q9Y6V7 483 aaKnown RBP16.77■□□□□ 0.27
CDK12-209ENST00000584632 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
CDK12-209ENST00000584632 ESPNB1AK53 854 aa16.76■□□□□ 0.27
CDK12-209ENST00000584632 NOB1Q9ULX3 412 aaKnown RBP16.76■□□□□ 0.27
CDK12-209ENST00000584632 CLCN1P35523 988 aa16.75■□□□□ 0.27
CDK12-209ENST00000584632 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
CDK12-209ENST00000584632 HDAC1Q13547 482 aaPredicted RBP16.75■□□□□ 0.27
CDK12-209ENST00000584632 PLCH2O75038 1416 aa16.75■□□□□ 0.27
CDK12-209ENST00000584632 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
CDK12-209ENST00000584632 TMEM132EQ6IEE7 984 aa16.74■□□□□ 0.27
CDK12-209ENST00000584632 RRAGDQ9NQL2 400 aaPredicted RBP16.74■□□□□ 0.27
CDK12-209ENST00000584632 STK26Q9P289 416 aa16.74■□□□□ 0.27
CDK12-209ENST00000584632 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
CDK12-209ENST00000584632 TNNQ9UQP3 1299 aa16.74■□□□□ 0.27
CDK12-209ENST00000584632 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
CDK12-209ENST00000584632 UNC13BO14795 1591 aa16.73■□□□□ 0.27
CDK12-209ENST00000584632 ANTXR1Q9H6X2 564 aa16.73■□□□□ 0.27
CDK12-209ENST00000584632 PREX2Q70Z35 1606 aa16.73■□□□□ 0.27
CDK12-209ENST00000584632 SSH1Q8WYL5 1049 aa16.72■□□□□ 0.27
CDK12-209ENST00000584632 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
CDK12-209ENST00000584632 TRIM27P14373 513 aa16.72■□□□□ 0.27
CDK12-209ENST00000584632 CHD1LQ86WJ1 897 aa16.71■□□□□ 0.27
CDK12-209ENST00000584632 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
CDK12-209ENST00000584632 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
CDK12-209ENST00000584632 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
CDK12-209ENST00000584632 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
CDK12-209ENST00000584632 TMEM57Q8N5G2 664 aa16.71■□□□□ 0.27
CDK12-209ENST00000584632 RRP9O43818 475 aaKnown RBP16.7■□□□□ 0.26
CDK12-209ENST00000584632 PANK2Q9BZ23 570 aa16.7■□□□□ 0.26
CDK12-209ENST00000584632 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
CDK12-209ENST00000584632 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
CDK12-209ENST00000584632 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
CDK12-209ENST00000584632 PTMAP06454 111 aaKnown RBP16.69■□□□□ 0.26
CDK12-209ENST00000584632 TRAPPC8Q9Y2L5 1435 aa16.69■□□□□ 0.26
CDK12-209ENST00000584632 NUCB2P80303 420 aa16.69■□□□□ 0.26
CDK12-209ENST00000584632 CCDC173Q0VFZ6 552 aa16.69■□□□□ 0.26
CDK12-209ENST00000584632 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
CDK12-209ENST00000584632 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
CDK12-209ENST00000584632 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
CDK12-209ENST00000584632 K7ELQ4 463 aaPredicted RBP16.68■□□□□ 0.26
CDK12-209ENST00000584632 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
CDK12-209ENST00000584632 NSD2O96028 1365 aa16.68■□□□□ 0.26
CDK12-209ENST00000584632 TPM2P07951 284 aa16.68■□□□□ 0.26
CDK12-209ENST00000584632 TNPO1Q92973 898 aaKnown RBP16.68■□□□□ 0.26
CDK12-209ENST00000584632 ST18O60284 1047 aa16.67■□□□□ 0.26
CDK12-209ENST00000584632 CDC45O75419 566 aa16.67■□□□□ 0.26
CDK12-209ENST00000584632 SNX21Q969T3 373 aa16.67■□□□□ 0.26
CDK12-209ENST00000584632 ZNF428Q96B54 188 aa16.67■□□□□ 0.26
CDK12-209ENST00000584632 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
CDK12-209ENST00000584632 RTEL1-TNFRSF6BF6WH68 1400 aa16.66■□□□□ 0.26
CDK12-209ENST00000584632 SMC5Q8IY18 1101 aa16.66■□□□□ 0.26
CDK12-209ENST00000584632 PLXNC1O60486 1568 aa16.66■□□□□ 0.26
CDK12-209ENST00000584632 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
CDK12-209ENST00000584632 TTC37Q6PGP7 1564 aa16.66■□□□□ 0.26
CDK12-209ENST00000584632 API5Q9BZZ5 524 aaKnown RBP16.65■□□□□ 0.26
CDK12-209ENST00000584632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.263e-6■■□□□ 13.9
CDK12-209ENST00000584632 IL16Q14005 1332 aa16.65■□□□□ 0.26
CDK12-209ENST00000584632 FSD2A1L4K1 749 aa16.65■□□□□ 0.26
CDK12-209ENST00000584632 ALDH1L2Q3SY69 923 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms