RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
ITGB4-212ENST00000584558 RALBP1Q15311 655 aa16.62■□□□□ 0.25
ITGB4-212ENST00000584558 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
ITGB4-212ENST00000584558 IDI1Q13907 227 aa16.61■□□□□ 0.25
ITGB4-212ENST00000584558 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
ITGB4-212ENST00000584558 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
ITGB4-212ENST00000584558 CEBPAP49715 358 aaPredicted RBP16.6■□□□□ 0.25
ITGB4-212ENST00000584558 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
ITGB4-212ENST00000584558 SBNO2Q9Y2G9 1366 aa16.6■□□□□ 0.25
ITGB4-212ENST00000584558 TMC1Q8TDI8 760 aa16.6■□□□□ 0.25
ITGB4-212ENST00000584558 SPATA31D1Q6ZQQ2 1576 aa16.59■□□□□ 0.25
ITGB4-212ENST00000584558 PANK3Q9H999 370 aa16.59■□□□□ 0.25
ITGB4-212ENST00000584558 RCAN3Q9UKA8 241 aa16.59■□□□□ 0.25
ITGB4-212ENST00000584558 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
ITGB4-212ENST00000584558 FBXO31Q5XUX0 539 aaPredicted RBP16.59■□□□□ 0.25
ITGB4-212ENST00000584558 PNISRQ8TF01 805 aaKnown RBP16.57■□□□□ 0.24
ITGB4-212ENST00000584558 QRICH2Q9H0J4 1663 aa16.57■□□□□ 0.24
ITGB4-212ENST00000584558 CDCA8Q53HL2 280 aa16.56■□□□□ 0.24
ITGB4-212ENST00000584558 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
ITGB4-212ENST00000584558 RRAGDQ9NQL2 400 aaPredicted RBP16.56■□□□□ 0.24
ITGB4-212ENST00000584558 ARHGEF28Q8N1W1 1705 aaKnown RBP16.56■□□□□ 0.24
ITGB4-212ENST00000584558 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
ITGB4-212ENST00000584558 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
ITGB4-212ENST00000584558 SLC24A1O60721 1099 aa16.54■□□□□ 0.24
ITGB4-212ENST00000584558 NAP1L5Q96NT1 182 aaPredicted RBP16.53■□□□□ 0.24
ITGB4-212ENST00000584558 PLIN1O60240 522 aa16.52■□□□□ 0.24
ITGB4-212ENST00000584558 CENPJQ9HC77 1338 aaPredicted RBP16.51■□□□□ 0.23
ITGB4-212ENST00000584558 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
ITGB4-212ENST00000584558 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
ITGB4-212ENST00000584558 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
ITGB4-212ENST00000584558 TMEM132EQ6IEE7 984 aa16.5■□□□□ 0.23
ITGB4-212ENST00000584558 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-212ENST00000584558 ARXQ96QS3 562 aa16.49■□□□□ 0.23
ITGB4-212ENST00000584558 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
ITGB4-212ENST00000584558 NPC1L1Q9UHC9 1359 aa16.49■□□□□ 0.23
ITGB4-212ENST00000584558 POGKQ9P215 609 aa16.49■□□□□ 0.23
ITGB4-212ENST00000584558 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
ITGB4-212ENST00000584558 TRAK1Q9UPV9 953 aa16.48■□□□□ 0.23
ITGB4-212ENST00000584558 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
ITGB4-212ENST00000584558 ESF1Q9H501 851 aaKnown RBP16.46■□□□□ 0.23
ITGB4-212ENST00000584558 SETD1AO15047 1707 aaKnown RBP16.46■□□□□ 0.23
ITGB4-212ENST00000584558 TULP4Q9NRJ4 1543 aa16.46■□□□□ 0.23
ITGB4-212ENST00000584558 ALKQ9UM73 1620 aa16.46■□□□□ 0.23
ITGB4-212ENST00000584558 ZMYM3Q14202 1370 aa16.44■□□□□ 0.22
ITGB4-212ENST00000584558 HSP90AA1P07900 732 aaKnown RBP16.44■□□□□ 0.22
ITGB4-212ENST00000584558 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
ITGB4-212ENST00000584558 PTPRMP28827 1452 aa16.44■□□□□ 0.22
ITGB4-212ENST00000584558 INSRP06213 1382 aa16.44■□□□□ 0.22
ITGB4-212ENST00000584558 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
ITGB4-212ENST00000584558 CDCA7LQ96GN5 454 aa16.43■□□□□ 0.22
ITGB4-212ENST00000584558 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
ITGB4-212ENST00000584558 CARD14Q9BXL6 1004 aa16.42■□□□□ 0.22
ITGB4-212ENST00000584558 PUS7Q96PZ0 661 aaKnown RBP16.41■□□□□ 0.22
ITGB4-212ENST00000584558 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
ITGB4-212ENST00000584558 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
ITGB4-212ENST00000584558 RRP9O43818 475 aaKnown RBP16.4■□□□□ 0.22
ITGB4-212ENST00000584558 C8orf34Q49A92 452 aa16.4■□□□□ 0.22
ITGB4-212ENST00000584558 L1TD1Q5T7N2 865 aaKnown RBP16.4■□□□□ 0.22
ITGB4-212ENST00000584558 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
ITGB4-212ENST00000584558 YTHDC2Q9H6S0 1430 aaKnown RBP16.4■□□□□ 0.22
ITGB4-212ENST00000584558 RIMS2Q9UQ26 1411 aa16.4■□□□□ 0.22
ITGB4-212ENST00000584558 BLMP54132 1417 aaPredicted RBP16.4■□□□□ 0.22
ITGB4-212ENST00000584558 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
ITGB4-212ENST00000584558 RGS3P49796 1198 aa16.39■□□□□ 0.21
ITGB4-212ENST00000584558 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
ITGB4-212ENST00000584558 UBR1Q8IWV7 1749 aa16.38■□□□□ 0.21
ITGB4-212ENST00000584558 KDM4FA0A1W2PPD8 638 aa16.37■□□□□ 0.21
ITGB4-212ENST00000584558 DLC1Q96QB1 1528 aa16.37■□□□□ 0.21
ITGB4-212ENST00000584558 PDE3BQ13370 1112 aa16.36■□□□□ 0.21
ITGB4-212ENST00000584558 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
ITGB4-212ENST00000584558 SLKQ9H2G2 1235 aaPredicted RBP16.36■□□□□ 0.21
ITGB4-212ENST00000584558 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
ITGB4-212ENST00000584558 TNRQ92752 1358 aa16.35■□□□□ 0.21
ITGB4-212ENST00000584558 EVC2Q86UK5 1308 aa16.35■□□□□ 0.21
ITGB4-212ENST00000584558 CENPQQ7L2Z9 268 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-212ENST00000584558 SLC12A5Q9H2X9 1139 aa16.34■□□□□ 0.21
ITGB4-212ENST00000584558 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
ITGB4-212ENST00000584558 KDM2BQ8NHM5 1336 aa16.34■□□□□ 0.21
ITGB4-212ENST00000584558 CLCN1P35523 988 aa16.32■□□□□ 0.2
ITGB4-212ENST00000584558 STK26Q9P289 416 aa16.32■□□□□ 0.2
ITGB4-212ENST00000584558 C3P01024 1663 aa16.32■□□□□ 0.2
ITGB4-212ENST00000584558 KNDC1Q76NI1 1749 aa16.31■□□□□ 0.2
ITGB4-212ENST00000584558 ANKRD36BQ8N2N9 1353 aa16.31■□□□□ 0.2
ITGB4-212ENST00000584558 XRCC6P12956 609 aaKnown RBP eCLIP16.3■□□□□ 0.2
ITGB4-212ENST00000584558 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
ITGB4-212ENST00000584558 PANK2Q9BZ23 570 aa16.3■□□□□ 0.2
ITGB4-212ENST00000584558 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
ITGB4-212ENST00000584558 FER1L4A9Z1Z3 1794 aa16.29■□□□□ 0.2
ITGB4-212ENST00000584558 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
ITGB4-212ENST00000584558 GOLGA6L3A6NEY3 463 aa16.29■□□□□ 0.2
ITGB4-212ENST00000584558 CABP2Q9NPB3 220 aa16.29■□□□□ 0.2
ITGB4-212ENST00000584558 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
ITGB4-212ENST00000584558 NLRP1Q9C000 1473 aa16.29■□□□□ 0.2
ITGB4-212ENST00000584558 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
ITGB4-212ENST00000584558 TMEM2Q9UHN6 1383 aa16.28■□□□□ 0.2
ITGB4-212ENST00000584558 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
ITGB4-212ENST00000584558 RIMS1Q86UR5 1692 aaKnown RBP16.28■□□□□ 0.2
ITGB4-212ENST00000584558 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
ITGB4-212ENST00000584558 ADAMTS8Q9UP79 889 aa16.28■□□□□ 0.2
ITGB4-212ENST00000584558 SHPRHQ149N8 1683 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms