RNA–Protein interactions for RNA: ENST00000583382.1

CDH8-209, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 1,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-209ENST00000583382 SUPT5HO00267 1087 aaKnown RBP7.93□□□□□ -1.14
CDH8-209ENST00000583382 ARHGAP33O14559 1287 aa7.93□□□□□ -1.14
CDH8-209ENST00000583382 PBX2P40425 430 aa7.92□□□□□ -1.14
CDH8-209ENST00000583382 PTGDRQ13258 359 aa7.92□□□□□ -1.14
CDH8-209ENST00000583382 ZC3H15Q8WU90 426 aaKnown RBP7.92□□□□□ -1.14
CDH8-209ENST00000583382 PPP1R3GB7ZBB8 358 aa7.91□□□□□ -1.14
CDH8-209ENST00000583382 FCHSD2O94868 740 aa7.91□□□□□ -1.14
CDH8-209ENST00000583382 PIP4K2BP78356 416 aa7.91□□□□□ -1.14
CDH8-209ENST00000583382 DMRTA1Q5VZB9 504 aa7.91□□□□□ -1.14
CDH8-209ENST00000583382 C9orf84Q5VXU9 1444 aa7.91□□□□□ -1.14
CDH8-209ENST00000583382 ZNF335Q9H4Z2 1342 aaPredicted RBP7.9□□□□□ -1.14
CDH8-209ENST00000583382 ATP10AO60312 1499 aa7.9□□□□□ -1.14
CDH8-209ENST00000583382 HECW1Q76N89 1606 aa7.9□□□□□ -1.15
CDH8-209ENST00000583382 NCOA1Q15788 1441 aa7.89□□□□□ -1.15
CDH8-209ENST00000583382 RAPGEF6Q8TEU7 1601 aa7.89□□□□□ -1.15
CDH8-209ENST00000583382 C3P01024 1663 aa7.89□□□□□ -1.15
CDH8-209ENST00000583382 TPRNQ4KMQ1 711 aa7.88□□□□□ -1.15
CDH8-209ENST00000583382 CDAN1Q8IWY9 1227 aa7.88□□□□□ -1.15
CDH8-209ENST00000583382 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
CDH8-209ENST00000583382 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
CDH8-209ENST00000583382 FECHP22830 423 aa7.88□□□□□ -1.15
CDH8-209ENST00000583382 HIC1Q14526 733 aa7.88□□□□□ -1.15
CDH8-209ENST00000583382 PROX2Q3B8N5 592 aa7.88□□□□□ -1.15
CDH8-209ENST00000583382 ZBED2Q9BTP6 218 aa7.88□□□□□ -1.15
CDH8-209ENST00000583382 ESF1Q9H501 851 aaKnown RBP7.88□□□□□ -1.15
CDH8-209ENST00000583382 GNPATO15228 680 aa7.87□□□□□ -1.15
CDH8-209ENST00000583382 ZMYND10O75800 440 aa7.87□□□□□ -1.15
CDH8-209ENST00000583382 PRSS12P56730 875 aa7.87□□□□□ -1.15
CDH8-209ENST00000583382 CDCA7LQ96GN5 454 aa7.87□□□□□ -1.15
CDH8-209ENST00000583382 TRAPPC8Q9Y2L5 1435 aa7.86□□□□□ -1.15
CDH8-209ENST00000583382 SUPT6HQ7KZ85 1726 aaKnown RBP7.86□□□□□ -1.15
CDH8-209ENST00000583382 LSM11P83369 360 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDH8-209ENST00000583382 FAM198AQ9UFP1 575 aa7.86□□□□□ -1.15
CDH8-209ENST00000583382 CAMSAP1Q5T5Y3 1602 aa7.85□□□□□ -1.15
CDH8-209ENST00000583382 PLEKHD1A6NEE1 506 aa7.85□□□□□ -1.15
CDH8-209ENST00000583382 TOM1O60784 492 aa7.85□□□□□ -1.15
CDH8-209ENST00000583382 PRKCSHP14314 528 aaPredicted RBP7.85□□□□□ -1.15
CDH8-209ENST00000583382 PADI6Q6TGC4 694 aa7.85□□□□□ -1.15
CDH8-209ENST00000583382 TSKSQ9UJT2 592 aa7.85□□□□□ -1.15
CDH8-209ENST00000583382 TRIM6-TRIM34B2RNG4 842 aa7.84□□□□□ -1.15
CDH8-209ENST00000583382 BARGINQ6ZT62 677 aa7.84□□□□□ -1.15
CDH8-209ENST00000583382 TTC13Q8NBP0 860 aa7.84□□□□□ -1.15
CDH8-209ENST00000583382 RBM27Q9P2N5 1060 aaKnown RBP7.84□□□□□ -1.15
CDH8-209ENST00000583382 SCAPERQ9BY12 1400 aa7.84□□□□□ -1.15
CDH8-209ENST00000583382 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.84□□□□□ -1.16
CDH8-209ENST00000583382 ANKRD13DQ6ZTN6 518 aa7.83□□□□□ -1.16
CDH8-209ENST00000583382 SLC4A5Q9BY07 1137 aa7.83□□□□□ -1.16
CDH8-209ENST00000583382 VPS9D1Q9Y2B5 631 aa7.83□□□□□ -1.16
CDH8-209ENST00000583382 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
CDH8-209ENST00000583382 CNTLNQ9NXG0 1405 aa7.82□□□□□ -1.16
CDH8-209ENST00000583382 REREQ9P2R6 1566 aa7.82□□□□□ -1.16
CDH8-209ENST00000583382 C3orf80F5H4A9 247 aa7.82□□□□□ -1.16
CDH8-209ENST00000583382 TK2O00142 265 aa7.82□□□□□ -1.16
CDH8-209ENST00000583382 ADGRD1Q6QNK2 874 aa7.82□□□□□ -1.16
CDH8-209ENST00000583382 AGLP35573 1532 aa7.81□□□□□ -1.16
CDH8-209ENST00000583382 PLA2R1Q13018 1463 aa7.81□□□□□ -1.16
CDH8-209ENST00000583382 ZNF518AQ6AHZ1 1483 aa7.81□□□□□ -1.16
CDH8-209ENST00000583382 NPATQ14207 1427 aa7.81□□□□□ -1.16
CDH8-209ENST00000583382 ONECUT3O60422 494 aaPredicted RBP7.81□□□□□ -1.16
CDH8-209ENST00000583382 FAM161AQ3B820 660 aa7.81□□□□□ -1.16
CDH8-209ENST00000583382 KIAA1468Q9P260 1216 aa7.81□□□□□ -1.16
CDH8-209ENST00000583382 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
CDH8-209ENST00000583382 CPS1P31327 1500 aa7.81□□□□□ -1.16
CDH8-209ENST00000583382 MYO5CQ9NQX4 1742 aa7.8□□□□□ -1.16
CDH8-209ENST00000583382 ZNF142P52746 1687 aaPredicted RBP7.8□□□□□ -1.16
CDH8-209ENST00000583382 PTPRKQ15262 1439 aa7.8□□□□□ -1.16
CDH8-209ENST00000583382 MAP2K5Q13163 448 aa7.8□□□□□ -1.16
CDH8-209ENST00000583382 KRI1Q8N9T8 703 aaKnown RBP7.8□□□□□ -1.16
CDH8-209ENST00000583382 NUP153P49790 1475 aaKnown RBP7.8□□□□□ -1.16
CDH8-209ENST00000583382 SAMD9Q5K651 1589 aa7.8□□□□□ -1.16
CDH8-209ENST00000583382 IRF6O14896 467 aa7.79□□□□□ -1.16
CDH8-209ENST00000583382 PACS2Q86VP3 889 aa7.79□□□□□ -1.16
CDH8-209ENST00000583382 RABGEF1Q9UJ41 708 aa7.79□□□□□ -1.16
CDH8-209ENST00000583382 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
CDH8-209ENST00000583382 MINK1Q8N4C8 1332 aaPredicted RBP7.79□□□□□ -1.16
CDH8-209ENST00000583382 PLCH2O75038 1416 aa7.79□□□□□ -1.16
CDH8-209ENST00000583382 BHMG1C9JSJ3 638 aaPredicted RBP7.78□□□□□ -1.16
CDH8-209ENST00000583382 HRO43593 1189 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 EFCAB2Q5VUJ9 269 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 SLC24A3Q9HC58 644 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 ADGRG1Q9Y653 693 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 KDM5CP41229 1560 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 DIP2CQ9Y2E4 1556 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 SMAPO00193 183 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 NUDT18Q6ZVK8 323 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 TATDN2Q93075 761 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 PNMA3Q9UL41 463 aa7.78□□□□□ -1.16
CDH8-209ENST00000583382 TCOF1Q13428 1488 aaKnown RBP7.77□□□□□ -1.17
CDH8-209ENST00000583382 NBPF26B4DH59 902 aa7.77□□□□□ -1.17
CDH8-209ENST00000583382 POTEAQ6S8J7 498 aa7.77□□□□□ -1.17
CDH8-209ENST00000583382 CCDC102AQ96A19 550 aa7.77□□□□□ -1.17
CDH8-209ENST00000583382 PCDH10Q9P2E7 1040 aa7.77□□□□□ -1.17
CDH8-209ENST00000583382 MYO3AQ8NEV4 1616 aa7.76□□□□□ -1.17
CDH8-209ENST00000583382 EYA1Q99502 592 aa7.76□□□□□ -1.17
CDH8-209ENST00000583382 SEPT9Q9UHD8 586 aaPredicted RBP7.76□□□□□ -1.17
CDH8-209ENST00000583382 CEP170BQ9Y4F5 1589 aaPredicted RBP7.76□□□□□ -1.17
CDH8-209ENST00000583382 POLR1AO95602 1720 aaPredicted RBP7.76□□□□□ -1.17
CDH8-209ENST00000583382 METTL3Q86U44 580 aaKnown RBP7.75□□□□□ -1.17
CDH8-209ENST00000583382 PXYLP1Q8TE99 480 aa7.75□□□□□ -1.17
CDH8-209ENST00000583382 PHOX2BQ99453 314 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms