RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 MSH6P52701 1360 aa23■■□□□ 1.27
CDK5RAP3-228ENST00000583363 SIRT1Q96EB6 747 aa22.99■■□□□ 1.27
CDK5RAP3-228ENST00000583363 AMOTL2Q9Y2J4 779 aa22.98■■□□□ 1.27
CDK5RAP3-228ENST00000583363 PTPRUQ92729 1446 aa22.98■■□□□ 1.27
CDK5RAP3-228ENST00000583363 PHLPP1O60346 1717 aa22.96■■□□□ 1.27
CDK5RAP3-228ENST00000583363 SLAIN2Q9P270 581 aa22.96■■□□□ 1.27
CDK5RAP3-228ENST00000583363 EIF3AQ14152 1382 aaKnown RBP22.96■■□□□ 1.27
CDK5RAP3-228ENST00000583363 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.26
CDK5RAP3-228ENST00000583363 TECPR2O15040 1411 aa22.93■■□□□ 1.26
CDK5RAP3-228ENST00000583363 DLC1Q96QB1 1528 aa22.92■■□□□ 1.26
CDK5RAP3-228ENST00000583363 CENPJQ9HC77 1338 aaPredicted RBP22.92■■□□□ 1.26
CDK5RAP3-228ENST00000583363 PRAM1Q96QH2 718 aa22.92■■□□□ 1.26
CDK5RAP3-228ENST00000583363 TESK2Q96S53 571 aa22.92■■□□□ 1.26
CDK5RAP3-228ENST00000583363 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
CDK5RAP3-228ENST00000583363 POGKQ9P215 609 aa22.91■■□□□ 1.26
CDK5RAP3-228ENST00000583363 COL16A1Q07092 1604 aaPredicted RBP22.9■■□□□ 1.26
CDK5RAP3-228ENST00000583363 JCADQ9P266 1359 aa22.89■■□□□ 1.26
CDK5RAP3-228ENST00000583363 ROBO2Q9HCK4 1378 aa22.89■■□□□ 1.25
CDK5RAP3-228ENST00000583363 SLC24A1O60721 1099 aa22.88■■□□□ 1.25
CDK5RAP3-228ENST00000583363 C11orf95C9JLR9 678 aaPredicted RBP22.87■■□□□ 1.25
CDK5RAP3-228ENST00000583363 NCOA3Q9Y6Q9 1424 aa22.87■■□□□ 1.25
CDK5RAP3-228ENST00000583363 ARHGEF28Q8N1W1 1705 aaKnown RBP22.87■■□□□ 1.25
CDK5RAP3-228ENST00000583363 PLEKHH1Q9ULM0 1364 aa22.87■■□□□ 1.25
CDK5RAP3-228ENST00000583363 KNDC1Q76NI1 1749 aa22.86■■□□□ 1.25
CDK5RAP3-228ENST00000583363 SAFB2Q14151 953 aaKnown RBP eCLIP22.86■■□□□ 1.25
CDK5RAP3-228ENST00000583363 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
CDK5RAP3-228ENST00000583363 SBNO2Q9Y2G9 1366 aa22.85■■□□□ 1.25
CDK5RAP3-228ENST00000583363 PTCH1Q13635 1447 aa22.84■■□□□ 1.25
CDK5RAP3-228ENST00000583363 XRN1Q8IZH2 1706 aaKnown RBP22.84■■□□□ 1.25
CDK5RAP3-228ENST00000583363 TMF1P82094 1093 aa22.83■■□□□ 1.25
CDK5RAP3-228ENST00000583363 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
CDK5RAP3-228ENST00000583363 LRP6O75581 1613 aa22.82■■□□□ 1.24
CDK5RAP3-228ENST00000583363 AHDC1Q5TGY3 1603 aaPredicted RBP22.8■■□□□ 1.24
CDK5RAP3-228ENST00000583363 C19orf44Q9H6X5 657 aa22.8■■□□□ 1.24
CDK5RAP3-228ENST00000583363 MINK1Q8N4C8 1332 aaPredicted RBP22.8■■□□□ 1.24
CDK5RAP3-228ENST00000583363 CADPS2Q86UW7 1296 aa22.79■■□□□ 1.24
CDK5RAP3-228ENST00000583363 WASHC2AQ641Q2 1341 aa22.78■■□□□ 1.24
CDK5RAP3-228ENST00000583363 QRICH2Q9H0J4 1663 aa22.77■■□□□ 1.24
CDK5RAP3-228ENST00000583363 ATF3P18847 181 aa22.77■■□□□ 1.24
CDK5RAP3-228ENST00000583363 SHPRHQ149N8 1683 aa22.77■■□□□ 1.24
CDK5RAP3-228ENST00000583363 KIF7Q2M1P5 1343 aa22.77■■□□□ 1.24
CDK5RAP3-228ENST00000583363 SPATA31A6Q5VVP1 1343 aa22.77■■□□□ 1.24
CDK5RAP3-228ENST00000583363 EVC2Q86UK5 1308 aa22.77■■□□□ 1.24
CDK5RAP3-228ENST00000583363 CDCA8Q53HL2 280 aa22.76■■□□□ 1.23
CDK5RAP3-228ENST00000583363 CCDC7Q96M83 1385 aa22.76■■□□□ 1.23
CDK5RAP3-228ENST00000583363 PUS7Q96PZ0 661 aaKnown RBP22.75■■□□□ 1.23
CDK5RAP3-228ENST00000583363 CDK19Q9BWU1 502 aa22.74■■□□□ 1.23
CDK5RAP3-228ENST00000583363 WASLO00401 505 aaPredicted RBP22.73■■□□□ 1.23
CDK5RAP3-228ENST00000583363 BRINP3Q76B58 766 aa22.72■■□□□ 1.23
CDK5RAP3-228ENST00000583363 MEX3CQ5U5Q3 659 aaKnown RBP22.71■■□□□ 1.23
CDK5RAP3-228ENST00000583363 POLR3GLQ9BT43 218 aa22.7■■□□□ 1.22
CDK5RAP3-228ENST00000583363 CABP2Q9NPB3 220 aa22.7■■□□□ 1.22
CDK5RAP3-228ENST00000583363 TULP4Q9NRJ4 1543 aa22.69■■□□□ 1.22
CDK5RAP3-228ENST00000583363 DCCP43146 1447 aa22.69■■□□□ 1.22
CDK5RAP3-228ENST00000583363 ZNF772Q68DY9 489 aaPredicted RBP22.69■■□□□ 1.22
CDK5RAP3-228ENST00000583363 SRPK2P78362 688 aaKnown RBP22.68■■□□□ 1.22
CDK5RAP3-228ENST00000583363 MST1RQ04912 1400 aa22.65■■□□□ 1.22
CDK5RAP3-228ENST00000583363 NHSL1Q5SYE7 1610 aa22.65■■□□□ 1.22
CDK5RAP3-228ENST00000583363 ADGRB2O60241 1585 aa22.65■■□□□ 1.22
CDK5RAP3-228ENST00000583363 DDX10Q13206 875 aaKnown RBP22.65■■□□□ 1.22
CDK5RAP3-228ENST00000583363 ADGRL3Q9HAR2 1447 aa22.65■■□□□ 1.22
CDK5RAP3-228ENST00000583363 NUTM2BA6NNL0 878 aaPredicted RBP22.63■■□□□ 1.21
CDK5RAP3-228ENST00000583363 NUTM2EB1AL46 878 aaPredicted RBP22.63■■□□□ 1.21
CDK5RAP3-228ENST00000583363 NUTM2AQ8IVF1 878 aaPredicted RBP22.63■■□□□ 1.21
CDK5RAP3-228ENST00000583363 NUDT16Q96DE0 195 aaKnown RBP22.63■■□□□ 1.21
CDK5RAP3-228ENST00000583363 UPF1Q92900 1129 aaKnown RBP eCLIP22.62■■□□□ 1.21
CDK5RAP3-228ENST00000583363 ATAD2Q6PL18 1390 aa22.61■■□□□ 1.21
CDK5RAP3-228ENST00000583363 CCDC61Q9Y6R9 512 aa22.6■■□□□ 1.21
CDK5RAP3-228ENST00000583363 NALCNQ8IZF0 1738 aa22.6■■□□□ 1.21
CDK5RAP3-228ENST00000583363 PRR36Q9H6K5 1346 aa22.59■■□□□ 1.21
CDK5RAP3-228ENST00000583363 RXRBP28702 533 aa22.59■■□□□ 1.21
CDK5RAP3-228ENST00000583363 TMC1Q8TDI8 760 aa22.59■■□□□ 1.21
CDK5RAP3-228ENST00000583363 SLC12A5Q9H2X9 1139 aa22.59■■□□□ 1.21
CDK5RAP3-228ENST00000583363 NUTM2FA1L443 756 aa22.58■■□□□ 1.21
CDK5RAP3-228ENST00000583363 DDX17Q92841 729 aaKnown RBP22.57■■□□□ 1.2
CDK5RAP3-228ENST00000583363 CABP1Q9NZU7 370 aa22.57■■□□□ 1.2
CDK5RAP3-228ENST00000583363 AFF2P51816 1311 aa22.57■■□□□ 1.2
CDK5RAP3-228ENST00000583363 CDC42BPGQ6DT37 1551 aa22.56■■□□□ 1.2
CDK5RAP3-228ENST00000583363 PANK3Q9H999 370 aa22.56■■□□□ 1.2
CDK5RAP3-228ENST00000583363 CDK12Q9NYV4 1490 aaPredicted RBP22.55■■□□□ 1.2
CDK5RAP3-228ENST00000583363 LRRC59Q96AG4 307 aaKnown RBP22.55■■□□□ 1.2
CDK5RAP3-228ENST00000583363 NINLQ9Y2I6 1382 aa22.54■■□□□ 1.2
CDK5RAP3-228ENST00000583363 ANKARQ7Z5J8 1434 aa22.54■■□□□ 1.2
CDK5RAP3-228ENST00000583363 PNPLA6Q8IY17 1366 aa22.53■■□□□ 1.2
CDK5RAP3-228ENST00000583363 PLEKHG3A1L390 1219 aa22.53■■□□□ 1.2
CDK5RAP3-228ENST00000583363 ATP7BP35670 1465 aa22.53■■□□□ 1.2
CDK5RAP3-228ENST00000583363 FMN2Q9NZ56 1722 aa22.52■■□□□ 1.2
CDK5RAP3-228ENST00000583363 PPIP5K1Q6PFW1 1433 aa22.5■■□□□ 1.19
CDK5RAP3-228ENST00000583363 C1orf167Q5SNV9 1468 aa22.5■■□□□ 1.19
CDK5RAP3-228ENST00000583363 PER1O15534 1290 aaPredicted RBP22.5■■□□□ 1.19
CDK5RAP3-228ENST00000583363 DIEXFQ68CQ4 756 aaKnown RBP22.5■■□□□ 1.19
CDK5RAP3-228ENST00000583363 USP32Q8NFA0 1604 aa22.49■■□□□ 1.19
CDK5RAP3-228ENST00000583363 C8orf37Q96NL8 207 aa22.49■■□□□ 1.19
CDK5RAP3-228ENST00000583363 TERF2IPQ9NYB0 399 aa22.49■■□□□ 1.19
CDK5RAP3-228ENST00000583363 MYOM1P52179 1685 aa22.48■■□□□ 1.19
CDK5RAP3-228ENST00000583363 CARD14Q9BXL6 1004 aa22.47■■□□□ 1.19
CDK5RAP3-228ENST00000583363 ANKRD36BQ8N2N9 1353 aa22.47■■□□□ 1.19
CDK5RAP3-228ENST00000583363 RGS12O14924 1447 aa22.47■■□□□ 1.19
CDK5RAP3-228ENST00000583363 ESCO1Q5FWF5 840 aa22.46■■□□□ 1.19
CDK5RAP3-228ENST00000583363 HDGFL2Q7Z4V5 671 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms