RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ZMYM3Q14202 1370 aa7.34□□□□□ -1.23
RTTN-209ENST00000583043 CHMP4CQ96CF2 233 aa7.34□□□□□ -1.24
RTTN-209ENST00000583043 ITPRIPQ8IWB1 547 aa7.33□□□□□ -1.24
RTTN-209ENST00000583043 TNNT2P45379 298 aaPredicted RBP7.33□□□□□ -1.24
RTTN-209ENST00000583043 NBR1Q14596 966 aa7.33□□□□□ -1.24
RTTN-209ENST00000583043 MLH3Q9UHC1 1453 aa7.33□□□□□ -1.24
RTTN-209ENST00000583043 BLMP54132 1417 aaPredicted RBP7.33□□□□□ -1.24
RTTN-209ENST00000583043 SKOR2Q2VWA4 1001 aaPredicted RBP7.32□□□□□ -1.24
RTTN-209ENST00000583043 ALDH1L2Q3SY69 923 aa7.32□□□□□ -1.24
RTTN-209ENST00000583043 NEURL4Q96JN8 1562 aa7.32□□□□□ -1.24
RTTN-209ENST00000583043 ZFYVE9O95405 1425 aa7.32□□□□□ -1.24
RTTN-209ENST00000583043 FAM69CQ0P6D2 419 aa7.32□□□□□ -1.24
RTTN-209ENST00000583043 TCP11L2Q8N4U5 519 aa7.32□□□□□ -1.24
RTTN-209ENST00000583043 ISY1Q9ULR0 285 aaKnown RBP7.32□□□□□ -1.24
RTTN-209ENST00000583043 NSD3Q9BZ95 1437 aa7.32□□□□□ -1.24
RTTN-209ENST00000583043 PER1O15534 1290 aaPredicted RBP7.32□□□□□ -1.24
RTTN-209ENST00000583043 DISP3Q9P2K9 1392 aa7.32□□□□□ -1.24
RTTN-209ENST00000583043 MAGI2Q86UL8 1455 aa7.32□□□□□ -1.24
RTTN-209ENST00000583043 DDX11L8A8MPP1 907 aa7.31□□□□□ -1.24
RTTN-209ENST00000583043 GCC1Q96CN9 775 aa7.31□□□□□ -1.24
RTTN-209ENST00000583043 PHF23Q9BUL5 403 aaPredicted RBP7.31□□□□□ -1.24
RTTN-209ENST00000583043 SHROOM2Q13796 1616 aa7.31□□□□□ -1.24
RTTN-209ENST00000583043 HSP90AB1P08238 724 aaKnown RBP7.31□□□□□ -1.24
RTTN-209ENST00000583043 AMER1Q5JTC6 1135 aaPredicted RBP7.31□□□□□ -1.24
RTTN-209ENST00000583043 BACH2Q9BYV9 841 aa7.31□□□□□ -1.24
RTTN-209ENST00000583043 CCDC146Q8IYE0 955 aa7.31□□□□□ -1.24
RTTN-209ENST00000583043 MTHFSP49914 203 aa7.31□□□□□ -1.24
RTTN-209ENST00000583043 NOS1P29475 1434 aa7.31□□□□□ -1.24
RTTN-209ENST00000583043 SIRT1Q96EB6 747 aa7.3□□□□□ -1.24
RTTN-209ENST00000583043 TTC37Q6PGP7 1564 aa7.3□□□□□ -1.24
RTTN-209ENST00000583043 SYNMO15061 1565 aa7.3□□□□□ -1.24
RTTN-209ENST00000583043 RIPK4P57078 832 aa7.3□□□□□ -1.24
RTTN-209ENST00000583043 LAS1LQ9Y4W2 734 aaKnown RBP7.3□□□□□ -1.24
RTTN-209ENST00000583043 LMTK2Q8IWU2 1503 aa7.29□□□□□ -1.24
RTTN-209ENST00000583043 TET3O43151 1660 aa7.29□□□□□ -1.24
RTTN-209ENST00000583043 GAS2L2Q8NHY3 880 aa7.29□□□□□ -1.24
RTTN-209ENST00000583043 ARHGAP31Q2M1Z3 1444 aa7.29□□□□□ -1.24
RTTN-209ENST00000583043 CCDC184Q52MB2 194 aa7.29□□□□□ -1.24
RTTN-209ENST00000583043 HSP90AB4PQ58FF6 505 aa7.29□□□□□ -1.24
RTTN-209ENST00000583043 TRIM44Q96DX7 344 aaPredicted RBP7.29□□□□□ -1.24
RTTN-209ENST00000583043 MINK1Q8N4C8 1332 aaPredicted RBP7.29□□□□□ -1.24
RTTN-209ENST00000583043 CDC42BPAQ5VT25 1732 aa7.29□□□□□ -1.24
RTTN-209ENST00000583043 DEKP35659 375 aaKnown RBP7.28□□□□□ -1.24
RTTN-209ENST00000583043 GPATCH3Q96I76 525 aa7.28□□□□□ -1.24
RTTN-209ENST00000583043 WWC1Q8IX03 1113 aa7.28□□□□□ -1.24
RTTN-209ENST00000583043 THEMISQ8N1K5 641 aaPredicted RBP7.28□□□□□ -1.24
RTTN-209ENST00000583043 REC8O95072 547 aa7.28□□□□□ -1.24
RTTN-209ENST00000583043 SOS1Q07889 1333 aaPredicted RBP7.28□□□□□ -1.24
RTTN-209ENST00000583043 ADGRF5Q8IZF2 1346 aa7.28□□□□□ -1.24
RTTN-209ENST00000583043 GLIPR1L2Q4G1C9 344 aa7.28□□□□□ -1.24
RTTN-209ENST00000583043 ARHGAP45Q92619 1136 aa7.28□□□□□ -1.24
RTTN-209ENST00000583043 SAFB2Q14151 953 aaKnown RBP eCLIP7.28□□□□□ -1.24
RTTN-209ENST00000583043 CSPP1Q1MSJ5 1256 aa7.28□□□□□ -1.24
RTTN-209ENST00000583043 C14orf37Q86TY3 774 aa7.28□□□□□ -1.24
RTTN-209ENST00000583043 NGDNQ8NEJ9 315 aaKnown RBP7.28□□□□□ -1.24
RTTN-209ENST00000583043 DUSP27Q5VZP5 1158 aa7.27□□□□□ -1.24
RTTN-209ENST00000583043 SYAP1Q96A49 352 aaPredicted RBP7.27□□□□□ -1.24
RTTN-209ENST00000583043 ST18O60284 1047 aa7.27□□□□□ -1.25
RTTN-209ENST00000583043 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
RTTN-209ENST00000583043 MVPQ14764 893 aaKnown RBP7.27□□□□□ -1.25
RTTN-209ENST00000583043 KDM6BO15054 1643 aa7.27□□□□□ -1.25
RTTN-209ENST00000583043 ZFYVE16Q7Z3T8 1539 aa7.27□□□□□ -1.25
RTTN-209ENST00000583043 AMPHP49418 695 aa7.27□□□□□ -1.25
RTTN-209ENST00000583043 CHMP5Q9NZZ3 219 aa7.27□□□□□ -1.25
RTTN-209ENST00000583043 CCDC61Q9Y6R9 512 aa7.27□□□□□ -1.25
RTTN-209ENST00000583043 PRAM1Q96QH2 718 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 IFT57Q9NWB7 429 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 COG6Q9Y2V7 657 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 CYB5RLQ6IPT4 315 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 CIZ1Q9ULV3 898 aaPredicted RBP7.26□□□□□ -1.25
RTTN-209ENST00000583043 HTATSF1O43719 755 aaKnown RBP7.26□□□□□ -1.25
RTTN-209ENST00000583043 CDK19Q9BWU1 502 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 SLC12A5Q9H2X9 1139 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 TTC21BQ7Z4L5 1316 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 MLECQ14165 292 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 CLASP1Q7Z460 1538 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 ATF7IPQ6VMQ6 1270 aa7.26□□□□□ -1.25
RTTN-209ENST00000583043 ZCCHC11Q5TAX3 1644 aaKnown RBP7.26□□□□□ -1.25
RTTN-209ENST00000583043 MCM2P49736 904 aa7.25□□□□□ -1.25
RTTN-209ENST00000583043 NFE2L2Q16236 605 aa7.25□□□□□ -1.25
RTTN-209ENST00000583043 CDCA7LQ96GN5 454 aa7.25□□□□□ -1.25
RTTN-209ENST00000583043 GNAI3P08754 354 aa7.25□□□□□ -1.25
RTTN-209ENST00000583043 CABP2Q9NPB3 220 aa7.25□□□□□ -1.25
RTTN-209ENST00000583043 KIAA1211Q6ZU35 1233 aa7.25□□□□□ -1.25
RTTN-209ENST00000583043 RPAP2Q8IXW5 612 aaPredicted RBP7.25□□□□□ -1.25
RTTN-209ENST00000583043 KDM5AP29375 1690 aaKnown RBP7.24□□□□□ -1.25
RTTN-209ENST00000583043 TTC21AQ8NDW8 1320 aa7.24□□□□□ -1.25
RTTN-209ENST00000583043 PLIN1O60240 522 aa7.24□□□□□ -1.25
RTTN-209ENST00000583043 TMEM132EQ6IEE7 984 aa7.24□□□□□ -1.25
RTTN-209ENST00000583043 TMPOP42166 694 aaKnown RBP7.24□□□□□ -1.25
RTTN-209ENST00000583043 INTS3Q68E01 1043 aaKnown RBP7.24□□□□□ -1.25
RTTN-209ENST00000583043 CDC45O75419 566 aa7.24□□□□□ -1.25
RTTN-209ENST00000583043 CCT4P50991 539 aaKnown RBP7.24□□□□□ -1.25
RTTN-209ENST00000583043 RARSP54136 660 aaKnown RBP7.24□□□□□ -1.25
RTTN-209ENST00000583043 NUCB2P80303 420 aa7.24□□□□□ -1.25
RTTN-209ENST00000583043 IDI1Q13907 227 aa7.24□□□□□ -1.25
RTTN-209ENST00000583043 GSE1Q14687 1217 aa7.24□□□□□ -1.25
RTTN-209ENST00000583043 ATP6V1DQ9Y5K8 247 aa7.24□□□□□ -1.25
RTTN-209ENST00000583043 CHD1O14646 1710 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms