RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 TRAK1Q9UPV9 953 aa17.21■□□□□ 0.35
SNRPD1-204ENST00000582475 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
SNRPD1-204ENST00000582475 YTHDC2Q9H6S0 1430 aaKnown RBP17.21■□□□□ 0.34
SNRPD1-204ENST00000582475 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
SNRPD1-204ENST00000582475 ROBO2Q9HCK4 1378 aa17.19■□□□□ 0.34
SNRPD1-204ENST00000582475 NCOA3Q9Y6Q9 1424 aa17.19■□□□□ 0.34
SNRPD1-204ENST00000582475 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
SNRPD1-204ENST00000582475 UBAP1LF5GYI3 381 aa17.18■□□□□ 0.34
SNRPD1-204ENST00000582475 C19orf44Q9H6X5 657 aa17.18■□□□□ 0.34
SNRPD1-204ENST00000582475 ASXL1Q8IXJ9 1541 aa17.17■□□□□ 0.34
SNRPD1-204ENST00000582475 TOM1O60784 492 aa17.17■□□□□ 0.34
SNRPD1-204ENST00000582475 POGKQ9P215 609 aa17.16■□□□□ 0.34
SNRPD1-204ENST00000582475 LAMC1P11047 1609 aa17.16■□□□□ 0.34
SNRPD1-204ENST00000582475 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
SNRPD1-204ENST00000582475 ADGRB1O14514 1584 aa17.15■□□□□ 0.34
SNRPD1-204ENST00000582475 TECPR2O15040 1411 aa17.15■□□□□ 0.34
SNRPD1-204ENST00000582475 PTCH1Q13635 1447 aa17.15■□□□□ 0.34
SNRPD1-204ENST00000582475 PRAM1Q96QH2 718 aa17.15■□□□□ 0.34
SNRPD1-204ENST00000582475 MSH6P52701 1360 aa17.15■□□□□ 0.34
SNRPD1-204ENST00000582475 FBXO41Q8TF61 875 aa17.14■□□□□ 0.33
SNRPD1-204ENST00000582475 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
SNRPD1-204ENST00000582475 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
SNRPD1-204ENST00000582475 ATF3P18847 181 aa17.13■□□□□ 0.33
SNRPD1-204ENST00000582475 SAFB2Q14151 953 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNRPD1-204ENST00000582475 PLEKHH1Q9ULM0 1364 aa17.13■□□□□ 0.33
SNRPD1-204ENST00000582475 KIAA1210Q9ULL0 1709 aa17.13■□□□□ 0.33
SNRPD1-204ENST00000582475 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
SNRPD1-204ENST00000582475 CARD11Q9BXL7 1154 aa17.12■□□□□ 0.33
SNRPD1-204ENST00000582475 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
SNRPD1-204ENST00000582475 FAM135BQ49AJ0 1406 aa17.12■□□□□ 0.33
SNRPD1-204ENST00000582475 XIRP1Q702N8 1843 aaKnown RBP17.11■□□□□ 0.33
SNRPD1-204ENST00000582475 PIP4K2BP78356 416 aa17.1■□□□□ 0.33
SNRPD1-204ENST00000582475 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
SNRPD1-204ENST00000582475 DLC1Q96QB1 1528 aa17.08■□□□□ 0.32
SNRPD1-204ENST00000582475 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.32
SNRPD1-204ENST00000582475 TRPM1Q7Z4N2 1603 aa17.07■□□□□ 0.32
SNRPD1-204ENST00000582475 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
SNRPD1-204ENST00000582475 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
SNRPD1-204ENST00000582475 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
SNRPD1-204ENST00000582475 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
SNRPD1-204ENST00000582475 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
SNRPD1-204ENST00000582475 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
SNRPD1-204ENST00000582475 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.04■□□□□ 0.32
SNRPD1-204ENST00000582475 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
SNRPD1-204ENST00000582475 DCCP43146 1447 aa17.03■□□□□ 0.32
SNRPD1-204ENST00000582475 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
SNRPD1-204ENST00000582475 WASLO00401 505 aaPredicted RBP17.01■□□□□ 0.31
SNRPD1-204ENST00000582475 EIF3AQ14152 1382 aaKnown RBP17.01■□□□□ 0.31
SNRPD1-204ENST00000582475 CDK19Q9BWU1 502 aa16.99■□□□□ 0.31
SNRPD1-204ENST00000582475 NALCNQ8IZF0 1738 aa16.99■□□□□ 0.31
SNRPD1-204ENST00000582475 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
SNRPD1-204ENST00000582475 MST1RQ04912 1400 aa16.98■□□□□ 0.31
SNRPD1-204ENST00000582475 ST20-MTHFSA0A0A6YYL1 179 aa16.98■□□□□ 0.31
SNRPD1-204ENST00000582475 ESCO1Q5FWF5 840 aa16.98■□□□□ 0.31
SNRPD1-204ENST00000582475 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
SNRPD1-204ENST00000582475 BRINP3Q76B58 766 aa16.97■□□□□ 0.31
SNRPD1-204ENST00000582475 C1orf167Q5SNV9 1468 aa16.97■□□□□ 0.31
SNRPD1-204ENST00000582475 USP47Q96K76 1375 aa16.94■□□□□ 0.3
SNRPD1-204ENST00000582475 HSPA1LP34931 641 aa16.94■□□□□ 0.3
SNRPD1-204ENST00000582475 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
SNRPD1-204ENST00000582475 NUDT16Q96DE0 195 aaKnown RBP16.94■□□□□ 0.3
SNRPD1-204ENST00000582475 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
SNRPD1-204ENST00000582475 EVC2Q86UK5 1308 aa16.94■□□□□ 0.3
SNRPD1-204ENST00000582475 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
SNRPD1-204ENST00000582475 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
SNRPD1-204ENST00000582475 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNRPD1-204ENST00000582475 TESK2Q96S53 571 aa16.92■□□□□ 0.3
SNRPD1-204ENST00000582475 PHF8Q9UPP1 1060 aa16.92■□□□□ 0.3
SNRPD1-204ENST00000582475 PRR36Q9H6K5 1346 aa16.92■□□□□ 0.3
SNRPD1-204ENST00000582475 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
SNRPD1-204ENST00000582475 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
SNRPD1-204ENST00000582475 FOXO3O43524 673 aa16.9■□□□□ 0.3
SNRPD1-204ENST00000582475 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
SNRPD1-204ENST00000582475 DDX17Q92841 729 aaKnown RBP16.9■□□□□ 0.3
SNRPD1-204ENST00000582475 SBNO2Q9Y2G9 1366 aa16.89■□□□□ 0.3
SNRPD1-204ENST00000582475 ANKARQ7Z5J8 1434 aa16.89■□□□□ 0.29
SNRPD1-204ENST00000582475 ROBO1Q9Y6N7 1651 aa16.89■□□□□ 0.29
SNRPD1-204ENST00000582475 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
SNRPD1-204ENST00000582475 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
SNRPD1-204ENST00000582475 POTEHQ6S545 545 aa16.88■□□□□ 0.29
SNRPD1-204ENST00000582475 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
SNRPD1-204ENST00000582475 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
SNRPD1-204ENST00000582475 TMF1P82094 1093 aa16.87■□□□□ 0.29
SNRPD1-204ENST00000582475 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
SNRPD1-204ENST00000582475 PLEKHG3A1L390 1219 aa16.86■□□□□ 0.29
SNRPD1-204ENST00000582475 PSME1Q06323 249 aa16.86■□□□□ 0.29
SNRPD1-204ENST00000582475 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
SNRPD1-204ENST00000582475 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
SNRPD1-204ENST00000582475 NPHP3Q7Z494 1330 aa16.86■□□□□ 0.29
SNRPD1-204ENST00000582475 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
SNRPD1-204ENST00000582475 CABP1Q9NZU7 370 aa16.85■□□□□ 0.29
SNRPD1-204ENST00000582475 XPCQ01831 940 aaPredicted RBP16.84■□□□□ 0.29
SNRPD1-204ENST00000582475 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
SNRPD1-204ENST00000582475 SOS2Q07890 1332 aaPredicted RBP16.84■□□□□ 0.29
SNRPD1-204ENST00000582475 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
SNRPD1-204ENST00000582475 USP32Q8NFA0 1604 aa16.82■□□□□ 0.28
SNRPD1-204ENST00000582475 ATP7BP35670 1465 aa16.82■□□□□ 0.28
SNRPD1-204ENST00000582475 ACEP12821 1306 aa16.82■□□□□ 0.28
SNRPD1-204ENST00000582475 CDCA8Q53HL2 280 aa16.82■□□□□ 0.28
SNRPD1-204ENST00000582475 ATAD2Q6PL18 1390 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms