RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 VPS8Q8N3P4 1428 aa14.49□□□□□ -0.09
GGA3-212ENST00000582376 BRWD3Q6RI45 1802 aa14.48□□□□□ -0.09
GGA3-212ENST00000582376 ANKRD50Q9ULJ7 1429 aa14.48□□□□□ -0.09
GGA3-212ENST00000582376 NPHP3Q7Z494 1330 aa14.46□□□□□ -0.09
GGA3-212ENST00000582376 ADGRL2O95490 1459 aa14.46□□□□□ -0.09
GGA3-212ENST00000582376 KRT27Q7Z3Y8 459 aa14.46□□□□□ -0.09
GGA3-212ENST00000582376 SLIT2O94813 1529 aa14.46□□□□□ -0.1
GGA3-212ENST00000582376 E9PCH4 1651 aa14.45□□□□□ -0.1
GGA3-212ENST00000582376 R3HDM1Q15032 1099 aaKnown RBP14.44□□□□□ -0.1
GGA3-212ENST00000582376 ZNF326Q5BKZ1 582 aaKnown RBP14.43□□□□□ -0.1
GGA3-212ENST00000582376 IQGAP3Q86VI3 1631 aa14.43□□□□□ -0.1
GGA3-212ENST00000582376 ESCO1Q5FWF5 840 aa14.42□□□□□ -0.1
GGA3-212ENST00000582376 PXDNQ92626 1479 aa14.42□□□□□ -0.1
GGA3-212ENST00000582376 ONECUT3O60422 494 aaPredicted RBP14.41□□□□□ -0.1
GGA3-212ENST00000582376 XPCQ01831 940 aaPredicted RBP14.41□□□□□ -0.1
GGA3-212ENST00000582376 EN1Q05925 392 aaPredicted RBP14.41□□□□□ -0.1
GGA3-212ENST00000582376 VPS72Q15906 364 aa14.41□□□□□ -0.1
GGA3-212ENST00000582376 FOXO3O43524 673 aa14.4□□□□□ -0.1
GGA3-212ENST00000582376 IFFO2Q5TF58 517 aa14.4□□□□□ -0.1
GGA3-212ENST00000582376 CCDC9Q9Y3X0 531 aaKnown RBP14.4□□□□□ -0.1
GGA3-212ENST00000582376 LRPPRCP42704 1394 aaKnown RBP14.39□□□□□ -0.11
GGA3-212ENST00000582376 ROBO2Q9HCK4 1378 aa14.39□□□□□ -0.11
GGA3-212ENST00000582376 A0A0G2JS52 829 aa14.37□□□□□ -0.11
GGA3-212ENST00000582376 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
GGA3-212ENST00000582376 MYT1Q01538 1121 aa14.37□□□□□ -0.11
GGA3-212ENST00000582376 USP32Q8NFA0 1604 aa14.36□□□□□ -0.11
GGA3-212ENST00000582376 HFM1A2PYH4 1435 aa14.35□□□□□ -0.11
GGA3-212ENST00000582376 HAP1P54257 671 aaPredicted RBP14.35□□□□□ -0.11
GGA3-212ENST00000582376 RGPD1P0DJD0 1748 aa14.35□□□□□ -0.11
GGA3-212ENST00000582376 DISP2A7MBM2 1401 aa14.34□□□□□ -0.11
GGA3-212ENST00000582376 SPATA31A3Q5VYP0 1347 aa14.34□□□□□ -0.11
GGA3-212ENST00000582376 PRAG1Q86YV5 1406 aa14.33□□□□□ -0.11
GGA3-212ENST00000582376 NEXMIFQ5QGS0 1516 aa14.33□□□□□ -0.12
GGA3-212ENST00000582376 APLP2Q06481 763 aa14.33□□□□□ -0.12
GGA3-212ENST00000582376 EZH2Q15910 746 aaKnown RBP14.33□□□□□ -0.12
GGA3-212ENST00000582376 CDC42BPGQ6DT37 1551 aa14.32□□□□□ -0.12
GGA3-212ENST00000582376 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
GGA3-212ENST00000582376 NUP155O75694 1391 aa14.32□□□□□ -0.12
GGA3-212ENST00000582376 NWD2Q9ULI1 1742 aa14.32□□□□□ -0.12
GGA3-212ENST00000582376 SENP3-EIF4A1A0A087X0R7 540 aa14.31□□□□□ -0.12
GGA3-212ENST00000582376 FAM98CQ17RN3 349 aaKnown RBP14.31□□□□□ -0.12
GGA3-212ENST00000582376 PLCH1Q4KWH8 1693 aa14.3□□□□□ -0.12
GGA3-212ENST00000582376 PPP1R1BQ9UD71 204 aaPredicted RBP14.3□□□□□ -0.12
GGA3-212ENST00000582376 NUTM2FA1L443 756 aa14.29□□□□□ -0.12
GGA3-212ENST00000582376 CCDC144AA2RUR9 1427 aa14.29□□□□□ -0.12
GGA3-212ENST00000582376 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
GGA3-212ENST00000582376 CABLES1Q8TDN4 633 aa14.28□□□□□ -0.12
GGA3-212ENST00000582376 CAMKK2Q96RR4 588 aa14.28□□□□□ -0.12
GGA3-212ENST00000582376 NINLQ9Y2I6 1382 aa14.27□□□□□ -0.12
GGA3-212ENST00000582376 VGFO15240 615 aaPredicted RBP14.27□□□□□ -0.13
GGA3-212ENST00000582376 KRT28Q7Z3Y7 464 aa14.27□□□□□ -0.13
GGA3-212ENST00000582376 ZNF784Q8NCA9 323 aaPredicted RBP14.27□□□□□ -0.13
GGA3-212ENST00000582376 TNS1Q9HBL0 1735 aaKnown RBP14.27□□□□□ -0.13
GGA3-212ENST00000582376 ADGRB2O60241 1585 aa14.26□□□□□ -0.13
GGA3-212ENST00000582376 NAIPQ13075 1403 aa14.26□□□□□ -0.13
GGA3-212ENST00000582376 PLEKHG5O94827 1062 aa14.26□□□□□ -0.13
GGA3-212ENST00000582376 SPON1Q9HCB6 807 aa14.26□□□□□ -0.13
GGA3-212ENST00000582376 TNS3Q68CZ2 1445 aa14.25□□□□□ -0.13
GGA3-212ENST00000582376 PARD3Q8TEW0 1356 aa14.25□□□□□ -0.13
GGA3-212ENST00000582376 FAM83GA6ND36 823 aa14.25□□□□□ -0.13
GGA3-212ENST00000582376 KIF1AQ12756 1690 aa14.24□□□□□ -0.13
GGA3-212ENST00000582376 PSME1Q06323 249 aa14.24□□□□□ -0.13
GGA3-212ENST00000582376 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
GGA3-212ENST00000582376 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
GGA3-212ENST00000582376 CLTCL1P53675 1640 aa14.23□□□□□ -0.13
GGA3-212ENST00000582376 KCNQ2O43526 872 aa14.23□□□□□ -0.13
GGA3-212ENST00000582376 TRIM37O94972 964 aa14.23□□□□□ -0.13
GGA3-212ENST00000582376 ROCK1Q13464 1354 aa14.22□□□□□ -0.13
GGA3-212ENST00000582376 APBA3O96018 575 aa14.22□□□□□ -0.13
GGA3-212ENST00000582376 C1QTNF8P60827 252 aa14.22□□□□□ -0.13
GGA3-212ENST00000582376 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
GGA3-212ENST00000582376 BTG4Q9NY30 223 aa14.22□□□□□ -0.13
GGA3-212ENST00000582376 NRAPQ86VF7 1730 aa14.21□□□□□ -0.13
GGA3-212ENST00000582376 FAM196AQ6ZSG2 479 aa14.21□□□□□ -0.13
GGA3-212ENST00000582376 ARHGEF10O15013 1369 aa14.21□□□□□ -0.14
GGA3-212ENST00000582376 KIF1BO60333 1816 aa14.2□□□□□ -0.14
GGA3-212ENST00000582376 ABCA3Q99758 1704 aa14.2□□□□□ -0.14
GGA3-212ENST00000582376 SBNO1A3KN83 1393 aa14.2□□□□□ -0.14
GGA3-212ENST00000582376 SPATA31A5Q5VU36 1347 aa14.19□□□□□ -0.14
GGA3-212ENST00000582376 SPATA31A7Q8IWB4 1347 aa14.19□□□□□ -0.14
GGA3-212ENST00000582376 WAPLQ7Z5K2 1190 aa14.19□□□□□ -0.14
GGA3-212ENST00000582376 CAMTA1Q9Y6Y1 1673 aa14.19□□□□□ -0.14
GGA3-212ENST00000582376 RREB1Q92766 1687 aa14.18□□□□□ -0.14
GGA3-212ENST00000582376 THSD7AQ9UPZ6 1657 aa14.18□□□□□ -0.14
GGA3-212ENST00000582376 PHF8Q9UPP1 1060 aa14.18□□□□□ -0.14
GGA3-212ENST00000582376 FMN2Q9NZ56 1722 aa14.18□□□□□ -0.14
GGA3-212ENST00000582376 RPGRIP1LQ68CZ1 1315 aa14.17□□□□□ -0.14
GGA3-212ENST00000582376 NUP188Q5SRE5 1749 aa14.17□□□□□ -0.14
GGA3-212ENST00000582376 STK26Q9P289 416 aa14.16□□□□□ -0.14
GGA3-212ENST00000582376 COL14A1Q05707 1796 aaKnown RBP14.15□□□□□ -0.14
GGA3-212ENST00000582376 TECPR2O15040 1411 aa14.15□□□□□ -0.14
GGA3-212ENST00000582376 PLEKHH1Q9ULM0 1364 aa14.14□□□□□ -0.15
GGA3-212ENST00000582376 RRBP1Q9P2E9 1410 aaKnown RBP14.14□□□□□ -0.15
GGA3-212ENST00000582376 LOC105371045A0A1W2PR82 267 aa14.13□□□□□ -0.15
GGA3-212ENST00000582376 NRXN1Q9ULB1 1477 aa14.12□□□□□ -0.15
GGA3-212ENST00000582376 ABCC11Q96J66 1382 aa14.11□□□□□ -0.15
GGA3-212ENST00000582376 PPLO60437 1756 aa14.11□□□□□ -0.15
GGA3-212ENST00000582376 SPATA31A1Q5TZJ5 1347 aa14.11□□□□□ -0.15
GGA3-212ENST00000582376 PDE3BQ13370 1112 aa14.1□□□□□ -0.15
GGA3-212ENST00000582376 NRKQ7Z2Y5 1582 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms