RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 C19orf44Q9H6X5 657 aa22.65■■□□□ 1.22
CCDC57-213ENST00000581625 POGKQ9P215 609 aa22.65■■□□□ 1.22
CCDC57-213ENST00000581625 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.65■■□□□ 1.22
CCDC57-213ENST00000581625 WAPLQ7Z5K2 1190 aa22.64■■□□□ 1.21
CCDC57-213ENST00000581625 CENPJQ9HC77 1338 aaPredicted RBP22.61■■□□□ 1.21
CCDC57-213ENST00000581625 QRICH2Q9H0J4 1663 aa22.61■■□□□ 1.21
CCDC57-213ENST00000581625 CADPS2Q86UW7 1296 aa22.6■■□□□ 1.21
CCDC57-213ENST00000581625 TOM1O60784 492 aa22.59■■□□□ 1.21
CCDC57-213ENST00000581625 ATF3P18847 181 aa22.59■■□□□ 1.21
CCDC57-213ENST00000581625 SAFB2Q14151 953 aaKnown RBP eCLIP22.58■■□□□ 1.21
CCDC57-213ENST00000581625 SBNO2Q9Y2G9 1366 aa22.58■■□□□ 1.21
CCDC57-213ENST00000581625 USP47Q96K76 1375 aa22.57■■□□□ 1.2
CCDC57-213ENST00000581625 FMN2Q9NZ56 1722 aa22.55■■□□□ 1.2
CCDC57-213ENST00000581625 UBAP1LF5GYI3 381 aa22.54■■□□□ 1.2
CCDC57-213ENST00000581625 MST1RQ04912 1400 aa22.54■■□□□ 1.2
CCDC57-213ENST00000581625 MINK1Q8N4C8 1332 aaPredicted RBP22.54■■□□□ 1.2
CCDC57-213ENST00000581625 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
CCDC57-213ENST00000581625 ANKARQ7Z5J8 1434 aa22.51■■□□□ 1.19
CCDC57-213ENST00000581625 TULP4Q9NRJ4 1543 aa22.51■■□□□ 1.19
CCDC57-213ENST00000581625 C1orf167Q5SNV9 1468 aa22.49■■□□□ 1.19
CCDC57-213ENST00000581625 SLC24A1O60721 1099 aa22.49■■□□□ 1.19
CCDC57-213ENST00000581625 HIRIP3Q9BW71 556 aaPredicted RBP22.49■■□□□ 1.19
CCDC57-213ENST00000581625 SLAIN2Q9P270 581 aa22.49■■□□□ 1.19
CCDC57-213ENST00000581625 WASLO00401 505 aaPredicted RBP22.48■■□□□ 1.19
CCDC57-213ENST00000581625 FBXO41Q8TF61 875 aa22.48■■□□□ 1.19
CCDC57-213ENST00000581625 ST20-MTHFSA0A0A6YYL1 179 aa22.46■■□□□ 1.19
CCDC57-213ENST00000581625 EIF4G2P78344 907 aaKnown RBP eCLIP22.46■■□□□ 1.19
CCDC57-213ENST00000581625 EVC2Q86UK5 1308 aa22.46■■□□□ 1.19
CCDC57-213ENST00000581625 ROBO1Q9Y6N7 1651 aa22.46■■□□□ 1.19
CCDC57-213ENST00000581625 ATP7BP35670 1465 aa22.44■■□□□ 1.18
CCDC57-213ENST00000581625 USP32Q8NFA0 1604 aa22.44■■□□□ 1.18
CCDC57-213ENST00000581625 ITSN1Q15811 1721 aa22.43■■□□□ 1.18
CCDC57-213ENST00000581625 PIP4K2BP78356 416 aa22.43■■□□□ 1.18
CCDC57-213ENST00000581625 TESK2Q96S53 571 aa22.43■■□□□ 1.18
CCDC57-213ENST00000581625 KIF1AQ12756 1690 aa22.42■■□□□ 1.18
CCDC57-213ENST00000581625 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
CCDC57-213ENST00000581625 CDK19Q9BWU1 502 aa22.41■■□□□ 1.18
CCDC57-213ENST00000581625 TOPAZ1Q8N9V7 1692 aa22.41■■□□□ 1.18
CCDC57-213ENST00000581625 SRPK2P78362 688 aaKnown RBP22.4■■□□□ 1.18
CCDC57-213ENST00000581625 BRINP3Q76B58 766 aa22.39■■□□□ 1.17
CCDC57-213ENST00000581625 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.17
CCDC57-213ENST00000581625 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
CCDC57-213ENST00000581625 NUTM2FA1L443 756 aa22.38■■□□□ 1.17
CCDC57-213ENST00000581625 HSPA5P11021 654 aaKnown RBP22.38■■□□□ 1.17
CCDC57-213ENST00000581625 PRR36Q9H6K5 1346 aa22.37■■□□□ 1.17
CCDC57-213ENST00000581625 TMF1P82094 1093 aa22.37■■□□□ 1.17
CCDC57-213ENST00000581625 NHSL1Q5SYE7 1610 aa22.37■■□□□ 1.17
CCDC57-213ENST00000581625 ESCO1Q5FWF5 840 aa22.36■■□□□ 1.17
CCDC57-213ENST00000581625 PUS7Q96PZ0 661 aaKnown RBP22.36■■□□□ 1.17
CCDC57-213ENST00000581625 RGPD8O14715 1765 aaPredicted RBP22.35■■□□□ 1.17
CCDC57-213ENST00000581625 NUDT16Q96DE0 195 aaKnown RBP22.35■■□□□ 1.17
CCDC57-213ENST00000581625 ORAI2Q96SN7 254 aa22.35■■□□□ 1.17
CCDC57-213ENST00000581625 CDCA8Q53HL2 280 aa22.34■■□□□ 1.17
CCDC57-213ENST00000581625 CABP2Q9NPB3 220 aa22.34■■□□□ 1.17
CCDC57-213ENST00000581625 CCDC61Q9Y6R9 512 aa22.34■■□□□ 1.17
CCDC57-213ENST00000581625 DISP3Q9P2K9 1392 aa22.33■■□□□ 1.17
CCDC57-213ENST00000581625 PHF8Q9UPP1 1060 aa22.32■■□□□ 1.16
CCDC57-213ENST00000581625 NPHP3Q7Z494 1330 aa22.31■■□□□ 1.16
CCDC57-213ENST00000581625 PPIP5K1Q6PFW1 1433 aa22.31■■□□□ 1.16
CCDC57-213ENST00000581625 NINLQ9Y2I6 1382 aa22.31■■□□□ 1.16
CCDC57-213ENST00000581625 PHLPP1O60346 1717 aa22.31■■□□□ 1.16
CCDC57-213ENST00000581625 COL16A1Q07092 1604 aaPredicted RBP22.28■■□□□ 1.16
CCDC57-213ENST00000581625 POLR3AO14802 1390 aaPredicted RBP22.28■■□□□ 1.16
CCDC57-213ENST00000581625 PLEKHG3A1L390 1219 aa22.27■■□□□ 1.16
CCDC57-213ENST00000581625 PXDNQ92626 1479 aa22.27■■□□□ 1.16
CCDC57-213ENST00000581625 FOXO3O43524 673 aa22.25■■□□□ 1.15
CCDC57-213ENST00000581625 PMFBP1Q8TBY8 1022 aa22.25■■□□□ 1.15
CCDC57-213ENST00000581625 NGDNQ8NEJ9 315 aaKnown RBP22.24■■□□□ 1.15
CCDC57-213ENST00000581625 SOS2Q07890 1332 aaPredicted RBP22.24■■□□□ 1.15
CCDC57-213ENST00000581625 HSPA1LP34931 641 aa22.23■■□□□ 1.15
CCDC57-213ENST00000581625 CABP1Q9NZU7 370 aa22.22■■□□□ 1.15
CCDC57-213ENST00000581625 ACEP12821 1306 aa22.22■■□□□ 1.15
CCDC57-213ENST00000581625 MYOM1P52179 1685 aa22.21■■□□□ 1.15
CCDC57-213ENST00000581625 BRD4O60885 1362 aaPredicted RBP22.21■■□□□ 1.15
CCDC57-213ENST00000581625 PSME1Q06323 249 aa22.2■■□□□ 1.14
CCDC57-213ENST00000581625 ILDR1Q86SU0 546 aaPredicted RBP22.2■■□□□ 1.14
CCDC57-213ENST00000581625 DDX17Q92841 729 aaKnown RBP22.2■■□□□ 1.14
CCDC57-213ENST00000581625 SBNO1A3KN83 1393 aa22.2■■□□□ 1.14
CCDC57-213ENST00000581625 CPSF1Q10570 1443 aaKnown RBP22.2■■□□□ 1.14
CCDC57-213ENST00000581625 AKAP12Q02952 1782 aa22.2■■□□□ 1.14
CCDC57-213ENST00000581625 USP6P35125 1406 aa22.19■■□□□ 1.14
CCDC57-213ENST00000581625 TRPM3Q9HCF6 1732 aaPredicted RBP22.19■■□□□ 1.14
CCDC57-213ENST00000581625 CD163L1Q9NR16 1453 aa22.18■■□□□ 1.14
CCDC57-213ENST00000581625 TNS3Q68CZ2 1445 aa22.18■■□□□ 1.14
CCDC57-213ENST00000581625 KRT28Q7Z3Y7 464 aa22.18■■□□□ 1.14
CCDC57-213ENST00000581625 TMC1Q8TDI8 760 aa22.18■■□□□ 1.14
CCDC57-213ENST00000581625 LRRC59Q96AG4 307 aaKnown RBP22.18■■□□□ 1.14
CCDC57-213ENST00000581625 MON2Q7Z3U7 1717 aa22.17■■□□□ 1.14
CCDC57-213ENST00000581625 JCADQ9P266 1359 aa22.17■■□□□ 1.14
CCDC57-213ENST00000581625 ZNF692Q9BU19 519 aaPredicted RBP22.17■■□□□ 1.14
CCDC57-213ENST00000581625 TERF2IPQ9NYB0 399 aa22.17■■□□□ 1.14
CCDC57-213ENST00000581625 SHPRHQ149N8 1683 aa22.17■■□□□ 1.14
CCDC57-213ENST00000581625 NRKQ7Z2Y5 1582 aa22.16■■□□□ 1.14
CCDC57-213ENST00000581625 ANKRD36BQ8N2N9 1353 aa22.16■■□□□ 1.14
CCDC57-213ENST00000581625 HDGFL2Q7Z4V5 671 aaPredicted RBP22.16■■□□□ 1.14
CCDC57-213ENST00000581625 KIF7Q2M1P5 1343 aa22.15■■□□□ 1.14
CCDC57-213ENST00000581625 XPCQ01831 940 aaPredicted RBP22.15■■□□□ 1.14
CCDC57-213ENST00000581625 SLC12A5Q9H2X9 1139 aa22.15■■□□□ 1.14
CCDC57-213ENST00000581625 A0A1W2PP64 1363 aa22.14■■□□□ 1.14
CCDC57-213ENST00000581625 ARHGEF10O15013 1369 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms