RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 CTC1Q2NKJ3 1217 aa10.55□□□□□ -0.72
TTC39C-207ENST00000581394 WNT7AO00755 349 aa10.52□□□□□ -0.73
TTC39C-207ENST00000581394 AXIN1O15169 862 aa10.52□□□□□ -0.73
TTC39C-207ENST00000581394 DACH1Q9UI36 760 aa10.52□□□□□ -0.73
TTC39C-207ENST00000581394 KDM4AO75164 1064 aa10.51□□□□□ -0.73
TTC39C-207ENST00000581394 HAP1P54257 671 aaPredicted RBP10.51□□□□□ -0.73
TTC39C-207ENST00000581394 KDM2AQ9Y2K7 1162 aa10.51□□□□□ -0.73
TTC39C-207ENST00000581394 IRF6O14896 467 aa10.5□□□□□ -0.73
TTC39C-207ENST00000581394 DXOO77932 396 aaKnown RBP10.5□□□□□ -0.73
TTC39C-207ENST00000581394 USP46P62068 366 aa10.5□□□□□ -0.73
TTC39C-207ENST00000581394 TRIM32Q13049 653 aa10.5□□□□□ -0.73
TTC39C-207ENST00000581394 LCE2AQ5TA79 106 aaPredicted RBP10.5□□□□□ -0.73
TTC39C-207ENST00000581394 TREML4Q6UXN2 200 aa10.5□□□□□ -0.73
TTC39C-207ENST00000581394 USB1Q9BQ65 265 aaKnown RBP10.5□□□□□ -0.73
TTC39C-207ENST00000581394 TTC24A2A3L6 582 aaPredicted RBP10.49□□□□□ -0.73
TTC39C-207ENST00000581394 SNIP1Q8TAD8 396 aaKnown RBP10.48□□□□□ -0.73
TTC39C-207ENST00000581394 GMPR2Q9P2T1 348 aaKnown RBP10.48□□□□□ -0.73
TTC39C-207ENST00000581394 MINK1Q8N4C8 1332 aaPredicted RBP10.48□□□□□ -0.73
TTC39C-207ENST00000581394 TULP1O00294 542 aaPredicted RBP10.46□□□□□ -0.73
TTC39C-207ENST00000581394 SMPD1P17405 629 aa10.46□□□□□ -0.73
TTC39C-207ENST00000581394 MDM2Q00987 491 aaPredicted RBP10.46□□□□□ -0.73
TTC39C-207ENST00000581394 HOXA2O43364 376 aa10.45□□□□□ -0.74
TTC39C-207ENST00000581394 MRGPRX2Q96LB1 330 aa10.44□□□□□ -0.74
TTC39C-207ENST00000581394 REPIN1Q9BWE0 567 aaKnown RBP10.44□□□□□ -0.74
TTC39C-207ENST00000581394 C11orf95C9JLR9 678 aaPredicted RBP10.43□□□□□ -0.74
TTC39C-207ENST00000581394 HLA-CQ95604 372 aa10.43□□□□□ -0.74
TTC39C-207ENST00000581394 CCDC102AQ96A19 550 aa10.42□□□□□ -0.74
TTC39C-207ENST00000581394 GPCPD1Q9NPB8 672 aa10.41□□□□□ -0.74
TTC39C-207ENST00000581394 J3QL48 77 aa10.4□□□□□ -0.74
TTC39C-207ENST00000581394 CLCN1P35523 988 aa10.4□□□□□ -0.74
TTC39C-207ENST00000581394 WNT7BP56706 349 aa10.4□□□□□ -0.74
TTC39C-207ENST00000581394 ATP13A2Q9NQ11 1180 aa10.4□□□□□ -0.74
TTC39C-207ENST00000581394 JUNDP17535 347 aa10.39□□□□□ -0.75
TTC39C-207ENST00000581394 SKOR1P84550 965 aa10.39□□□□□ -0.75
TTC39C-207ENST00000581394 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
TTC39C-207ENST00000581394 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
TTC39C-207ENST00000581394 WFS1O76024 890 aa10.38□□□□□ -0.75
TTC39C-207ENST00000581394 RC3H1Q5TC82 1133 aaKnown RBP10.38□□□□□ -0.75
TTC39C-207ENST00000581394 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
TTC39C-207ENST00000581394 VSIG10Q8N0Z9 540 aa10.37□□□□□ -0.75
TTC39C-207ENST00000581394 NFX1Q12986 1120 aaKnown RBP10.36□□□□□ -0.75
TTC39C-207ENST00000581394 RETREG3Q86VR2 466 aa10.36□□□□□ -0.75
TTC39C-207ENST00000581394 HPS1Q92902 700 aa10.35□□□□□ -0.75
TTC39C-207ENST00000581394 SENP2Q9HC62 589 aa10.35□□□□□ -0.75
TTC39C-207ENST00000581394 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
TTC39C-207ENST00000581394 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
TTC39C-207ENST00000581394 TRIM47Q96LD4 638 aa10.34□□□□□ -0.75
TTC39C-207ENST00000581394 WIPF1O43516 503 aa10.32□□□□□ -0.76
TTC39C-207ENST00000581394 SNRPBP14678 240 aaKnown RBP10.32□□□□□ -0.76
TTC39C-207ENST00000581394 NUDT12Q9BQG2 462 aa10.32□□□□□ -0.76
TTC39C-207ENST00000581394 KIFC2Q96AC6 838 aa10.31□□□□□ -0.76
TTC39C-207ENST00000581394 FDX1P10109 184 aa10.3□□□□□ -0.76
TTC39C-207ENST00000581394 KRI1Q8N9T8 703 aaKnown RBP10.3□□□□□ -0.76
TTC39C-207ENST00000581394 SIAH2O43255 324 aa10.29□□□□□ -0.76
TTC39C-207ENST00000581394 PTCRAQ6ISU1 281 aaPredicted RBP10.29□□□□□ -0.76
TTC39C-207ENST00000581394 PCDHGC3Q9UN70 934 aa10.29□□□□□ -0.76
TTC39C-207ENST00000581394 ALDH1A1P00352 501 aa10.28□□□□□ -0.76
TTC39C-207ENST00000581394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.28□□□□□ -0.76
TTC39C-207ENST00000581394 TERTO14746 1132 aaKnown RBP10.27□□□□□ -0.77
TTC39C-207ENST00000581394 C6orf229H3BNL8 230 aa10.26□□□□□ -0.77
TTC39C-207ENST00000581394 MS4A1P11836 297 aa10.26□□□□□ -0.77
TTC39C-207ENST00000581394 EHBP1Q8NDI1 1231 aa10.26□□□□□ -0.77
TTC39C-207ENST00000581394 CCNYL3P0C7X3 344 aa10.25□□□□□ -0.77
TTC39C-207ENST00000581394 SSTR3P32745 418 aaPredicted RBP10.25□□□□□ -0.77
TTC39C-207ENST00000581394 INSM1Q01101 510 aaPredicted RBP10.25□□□□□ -0.77
TTC39C-207ENST00000581394 SPIRE2Q8WWL2 714 aa10.25□□□□□ -0.77
TTC39C-207ENST00000581394 SH3BP2P78314 561 aa10.24□□□□□ -0.77
TTC39C-207ENST00000581394 PTPRNQ16849 979 aa10.24□□□□□ -0.77
TTC39C-207ENST00000581394 LCE2CQ5TA81 110 aa10.24□□□□□ -0.77
TTC39C-207ENST00000581394 STK17AQ9UEE5 414 aa10.24□□□□□ -0.77
TTC39C-207ENST00000581394 EVA1BQ9NVM1 165 aa10.22□□□□□ -0.77
TTC39C-207ENST00000581394 AMHR2Q16671 573 aa10.21□□□□□ -0.77
TTC39C-207ENST00000581394 UNC93B1Q9H1C4 597 aa10.21□□□□□ -0.77
TTC39C-207ENST00000581394 WASF2Q9Y6W5 498 aa10.21□□□□□ -0.77
TTC39C-207ENST00000581394 MOXD2PA6NHM9 499 aa10.2□□□□□ -0.78
TTC39C-207ENST00000581394 NDUFV2P19404 249 aa10.2□□□□□ -0.78
TTC39C-207ENST00000581394 DESI1Q6ICB0 168 aa10.2□□□□□ -0.78
TTC39C-207ENST00000581394 BARGINQ6ZT62 677 aa10.2□□□□□ -0.78
TTC39C-207ENST00000581394 SPDYE5A6NIY4 337 aa10.19□□□□□ -0.78
TTC39C-207ENST00000581394 CAPN5O15484 640 aaPredicted RBP10.19□□□□□ -0.78
TTC39C-207ENST00000581394 KCNH2Q12809 1159 aa10.19□□□□□ -0.78
TTC39C-207ENST00000581394 TRIM46Q7Z4K8 759 aa10.19□□□□□ -0.78
TTC39C-207ENST00000581394 ZMYND10O75800 440 aa10.18□□□□□ -0.78
TTC39C-207ENST00000581394 MTMR2Q13614 643 aa10.18□□□□□ -0.78
TTC39C-207ENST00000581394 TTLL12Q14166 644 aaPredicted RBP10.18□□□□□ -0.78
TTC39C-207ENST00000581394 PRR7Q8TB68 274 aa10.18□□□□□ -0.78
TTC39C-207ENST00000581394 MPNDQ8N594 471 aa10.17□□□□□ -0.78
TTC39C-207ENST00000581394 BMP1P13497 986 aa10.16□□□□□ -0.78
TTC39C-207ENST00000581394 GJA5P36382 358 aa10.16□□□□□ -0.78
TTC39C-207ENST00000581394 BAP1Q92560 729 aa10.16□□□□□ -0.78
TTC39C-207ENST00000581394 NXF1Q9UBU9 619 aaKnown RBP10.16□□□□□ -0.78
TTC39C-207ENST00000581394 VARSP26640 1264 aaKnown RBP10.15□□□□□ -0.78
TTC39C-207ENST00000581394 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
TTC39C-207ENST00000581394 GIGYF2Q6Y7W6 1299 aaKnown RBP10.15□□□□□ -0.78
TTC39C-207ENST00000581394 NPAS3Q8IXF0 933 aa10.15□□□□□ -0.78
TTC39C-207ENST00000581394 ZNF511Q8NB15 262 aa10.15□□□□□ -0.78
TTC39C-207ENST00000581394 SLC16A10Q8TF71 515 aa10.15□□□□□ -0.78
TTC39C-207ENST00000581394 PLEKHG3A1L390 1219 aa10.14□□□□□ -0.79
TTC39C-207ENST00000581394 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
TTC39C-207ENST00000581394 BEGAINQ9BUH8 593 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms