RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
GAPLINC-203ENST00000581029 TESK2Q96S53 571 aa12.66□□□□□ -0.38
GAPLINC-203ENST00000581029 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.38
GAPLINC-203ENST00000581029 NWD1Q149M9 1564 aa12.65□□□□□ -0.38
GAPLINC-203ENST00000581029 QRICH2Q9H0J4 1663 aa12.65□□□□□ -0.38
GAPLINC-203ENST00000581029 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
GAPLINC-203ENST00000581029 STRCQ7RTU9 1775 aa12.65□□□□□ -0.38
GAPLINC-203ENST00000581029 NINLQ9Y2I6 1382 aa12.64□□□□□ -0.39
GAPLINC-203ENST00000581029 ATAD2Q6PL18 1390 aa12.63□□□□□ -0.39
GAPLINC-203ENST00000581029 CCDC7Q96M83 1385 aa12.63□□□□□ -0.39
GAPLINC-203ENST00000581029 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
GAPLINC-203ENST00000581029 ROBO2Q9HCK4 1378 aa12.62□□□□□ -0.39
GAPLINC-203ENST00000581029 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
GAPLINC-203ENST00000581029 HIRIP3Q9BW71 556 aaPredicted RBP12.62□□□□□ -0.39
GAPLINC-203ENST00000581029 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
GAPLINC-203ENST00000581029 KIF7Q2M1P5 1343 aa12.61□□□□□ -0.39
GAPLINC-203ENST00000581029 ADGRB2O60241 1585 aa12.6□□□□□ -0.39
GAPLINC-203ENST00000581029 WAPLQ7Z5K2 1190 aa12.6□□□□□ -0.39
GAPLINC-203ENST00000581029 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
GAPLINC-203ENST00000581029 WASHC2AQ641Q2 1341 aa12.6□□□□□ -0.39
GAPLINC-203ENST00000581029 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
GAPLINC-203ENST00000581029 SRPK2P78362 688 aaKnown RBP12.59□□□□□ -0.39
GAPLINC-203ENST00000581029 MINK1Q8N4C8 1332 aaPredicted RBP12.59□□□□□ -0.39
GAPLINC-203ENST00000581029 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
GAPLINC-203ENST00000581029 SAFB2Q14151 953 aaKnown RBP eCLIP12.58□□□□□ -0.4
GAPLINC-203ENST00000581029 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
GAPLINC-203ENST00000581029 DISP3Q9P2K9 1392 aa12.57□□□□□ -0.4
GAPLINC-203ENST00000581029 DCCP43146 1447 aa12.57□□□□□ -0.4
GAPLINC-203ENST00000581029 ADGRL3Q9HAR2 1447 aa12.57□□□□□ -0.4
GAPLINC-203ENST00000581029 POLR3GLQ9BT43 218 aa12.57□□□□□ -0.4
GAPLINC-203ENST00000581029 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
GAPLINC-203ENST00000581029 C19orf44Q9H6X5 657 aa12.57□□□□□ -0.4
GAPLINC-203ENST00000581029 ANKARQ7Z5J8 1434 aa12.56□□□□□ -0.4
GAPLINC-203ENST00000581029 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
GAPLINC-203ENST00000581029 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
GAPLINC-203ENST00000581029 TERF2IPQ9NYB0 399 aa12.55□□□□□ -0.4
GAPLINC-203ENST00000581029 CCDC61Q9Y6R9 512 aa12.55□□□□□ -0.4
GAPLINC-203ENST00000581029 CDC42BPGQ6DT37 1551 aa12.55□□□□□ -0.4
GAPLINC-203ENST00000581029 MSH6P52701 1360 aa12.55□□□□□ -0.4
GAPLINC-203ENST00000581029 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
GAPLINC-203ENST00000581029 C11orf95C9JLR9 678 aaPredicted RBP12.54□□□□□ -0.4
GAPLINC-203ENST00000581029 ATF3P18847 181 aa12.54□□□□□ -0.4
GAPLINC-203ENST00000581029 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
GAPLINC-203ENST00000581029 DIEXFQ68CQ4 756 aaKnown RBP12.54□□□□□ -0.4
GAPLINC-203ENST00000581029 HDGFL2Q7Z4V5 671 aaPredicted RBP12.53□□□□□ -0.4
GAPLINC-203ENST00000581029 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
GAPLINC-203ENST00000581029 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.53□□□□□ -0.4
GAPLINC-203ENST00000581029 TMEM94Q12767 1356 aa12.53□□□□□ -0.4
GAPLINC-203ENST00000581029 ITSN1Q15811 1721 aa12.52□□□□□ -0.41
GAPLINC-203ENST00000581029 TMC1Q8TDI8 760 aa12.52□□□□□ -0.41
GAPLINC-203ENST00000581029 NUDT16Q96DE0 195 aaKnown RBP12.52□□□□□ -0.41
GAPLINC-203ENST00000581029 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
GAPLINC-203ENST00000581029 ZNF335Q9H4Z2 1342 aaPredicted RBP12.51□□□□□ -0.41
GAPLINC-203ENST00000581029 KTN1Q86UP2 1357 aaKnown RBP12.51□□□□□ -0.41
GAPLINC-203ENST00000581029 ANKRD36BQ8N2N9 1353 aa12.51□□□□□ -0.41
GAPLINC-203ENST00000581029 ATP7BP35670 1465 aa12.51□□□□□ -0.41
GAPLINC-203ENST00000581029 KNSTRNQ9Y448 316 aa12.5□□□□□ -0.41
GAPLINC-203ENST00000581029 BRD4O60885 1362 aaPredicted RBP12.5□□□□□ -0.41
GAPLINC-203ENST00000581029 LRRC7Q96NW7 1537 aa12.5□□□□□ -0.41
GAPLINC-203ENST00000581029 FMN2Q9NZ56 1722 aa12.49□□□□□ -0.41
GAPLINC-203ENST00000581029 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
GAPLINC-203ENST00000581029 ANP32CO43423 234 aa12.49□□□□□ -0.41
GAPLINC-203ENST00000581029 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
GAPLINC-203ENST00000581029 NALCNQ8IZF0 1738 aa12.48□□□□□ -0.41
GAPLINC-203ENST00000581029 PPIP5K1Q6PFW1 1433 aa12.48□□□□□ -0.41
GAPLINC-203ENST00000581029 PANK3Q9H999 370 aa12.48□□□□□ -0.41
GAPLINC-203ENST00000581029 NPC1L1Q9UHC9 1359 aa12.47□□□□□ -0.41
GAPLINC-203ENST00000581029 IQSEC2Q5JU85 1478 aa12.46□□□□□ -0.41
GAPLINC-203ENST00000581029 NSD2O96028 1365 aa12.46□□□□□ -0.41
GAPLINC-203ENST00000581029 CGNL1Q0VF96 1302 aa12.46□□□□□ -0.41
GAPLINC-203ENST00000581029 MYOM1P52179 1685 aa12.46□□□□□ -0.41
GAPLINC-203ENST00000581029 SLC12A5Q9H2X9 1139 aa12.46□□□□□ -0.41
GAPLINC-203ENST00000581029 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
GAPLINC-203ENST00000581029 NGDNQ8NEJ9 315 aaKnown RBP12.45□□□□□ -0.42
GAPLINC-203ENST00000581029 POLR3AO14802 1390 aaPredicted RBP12.44□□□□□ -0.42
GAPLINC-203ENST00000581029 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
GAPLINC-203ENST00000581029 RALBP1Q15311 655 aa12.44□□□□□ -0.42
GAPLINC-203ENST00000581029 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
GAPLINC-203ENST00000581029 KIF1AQ12756 1690 aa12.44□□□□□ -0.42
GAPLINC-203ENST00000581029 TOPAZ1Q8N9V7 1692 aa12.44□□□□□ -0.42
GAPLINC-203ENST00000581029 CPSF1Q10570 1443 aaKnown RBP12.44□□□□□ -0.42
GAPLINC-203ENST00000581029 LTBP4Q8N2S1 1624 aa12.44□□□□□ -0.42
GAPLINC-203ENST00000581029 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
GAPLINC-203ENST00000581029 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
GAPLINC-203ENST00000581029 EDC4Q6P2E9 1401 aaKnown RBP12.43□□□□□ -0.42
GAPLINC-203ENST00000581029 ACEP12821 1306 aa12.42□□□□□ -0.42
GAPLINC-203ENST00000581029 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
GAPLINC-203ENST00000581029 PRR36Q9H6K5 1346 aa12.42□□□□□ -0.42
GAPLINC-203ENST00000581029 C1orf167Q5SNV9 1468 aa12.42□□□□□ -0.42
GAPLINC-203ENST00000581029 USP32Q8NFA0 1604 aa12.42□□□□□ -0.42
GAPLINC-203ENST00000581029 PSME1Q06323 249 aa12.42□□□□□ -0.42
GAPLINC-203ENST00000581029 MST1RQ04912 1400 aa12.42□□□□□ -0.42
GAPLINC-203ENST00000581029 A0A1W2PP64 1363 aa12.42□□□□□ -0.42
GAPLINC-203ENST00000581029 TOM1O60784 492 aa12.41□□□□□ -0.42
GAPLINC-203ENST00000581029 RBM33Q96EV2 1170 aaKnown RBP12.41□□□□□ -0.42
GAPLINC-203ENST00000581029 XIRP1Q702N8 1843 aaKnown RBP12.41□□□□□ -0.42
GAPLINC-203ENST00000581029 AKAP12Q02952 1782 aa12.41□□□□□ -0.42
GAPLINC-203ENST00000581029 NPHP3Q7Z494 1330 aa12.4□□□□□ -0.42
GAPLINC-203ENST00000581029 NSD3Q9BZ95 1437 aa12.4□□□□□ -0.42
GAPLINC-203ENST00000581029 NUTM2FA1L443 756 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms