RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 ZBTB24O43167 697 aaPredicted RBP12.44□□□□□ -0.42
VNN3-214ENST00000580813 HOXA2O43364 376 aa12.44□□□□□ -0.42
VNN3-214ENST00000580813 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
VNN3-214ENST00000580813 NUTM1Q86Y26 1132 aa12.44□□□□□ -0.42
VNN3-214ENST00000580813 ZC3H15Q8WU90 426 aaKnown RBP12.44□□□□□ -0.42
VNN3-214ENST00000580813 USB1Q9BQ65 265 aaKnown RBP12.44□□□□□ -0.42
VNN3-214ENST00000580813 FAM187AA6NFU0 413 aa12.43□□□□□ -0.42
VNN3-214ENST00000580813 ZMYND10O75800 440 aa12.43□□□□□ -0.42
VNN3-214ENST00000580813 REPIN1Q9BWE0 567 aaKnown RBP12.43□□□□□ -0.42
VNN3-214ENST00000580813 DGAT1O75907 488 aa12.42□□□□□ -0.42
VNN3-214ENST00000580813 GUCA2AQ02747 115 aa12.42□□□□□ -0.42
VNN3-214ENST00000580813 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
VNN3-214ENST00000580813 PKD2L1Q9P0L9 805 aa12.41□□□□□ -0.42
VNN3-214ENST00000580813 SSTR3P32745 418 aaPredicted RBP12.4□□□□□ -0.42
VNN3-214ENST00000580813 MMP16P51512 607 aa12.39□□□□□ -0.43
VNN3-214ENST00000580813 MYT1Q01538 1121 aa12.38□□□□□ -0.43
VNN3-214ENST00000580813 ZNF787Q6DD87 383 aa12.38□□□□□ -0.43
VNN3-214ENST00000580813 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
VNN3-214ENST00000580813 CCDC24Q8N4L8 307 aa12.36□□□□□ -0.43
VNN3-214ENST00000580813 DXOO77932 396 aaKnown RBP12.35□□□□□ -0.43
VNN3-214ENST00000580813 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
VNN3-214ENST00000580813 FDX1P10109 184 aa12.33□□□□□ -0.44
VNN3-214ENST00000580813 AMHR2Q16671 573 aa12.33□□□□□ -0.44
VNN3-214ENST00000580813 TRIM32Q13049 653 aa12.32□□□□□ -0.44
VNN3-214ENST00000580813 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
VNN3-214ENST00000580813 SPIRE2Q8WWL2 714 aa12.32□□□□□ -0.44
VNN3-214ENST00000580813 C6orf229H3BNL8 230 aa12.31□□□□□ -0.44
VNN3-214ENST00000580813 RETREG3Q86VR2 466 aa12.3□□□□□ -0.44
VNN3-214ENST00000580813 TOR4AQ9NXH8 423 aa12.3□□□□□ -0.44
VNN3-214ENST00000580813 JUNDP17535 347 aa12.29□□□□□ -0.44
VNN3-214ENST00000580813 PCDHGC3Q9UN70 934 aa12.29□□□□□ -0.44
VNN3-214ENST00000580813 TTC24A2A3L6 582 aaPredicted RBP12.28□□□□□ -0.44
VNN3-214ENST00000580813 ST8SIA5O15466 376 aa12.28□□□□□ -0.44
VNN3-214ENST00000580813 NDUFV2P19404 249 aa12.28□□□□□ -0.44
VNN3-214ENST00000580813 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.45
VNN3-214ENST00000580813 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.45
VNN3-214ENST00000580813 WNT7AO00755 349 aa12.26□□□□□ -0.45
VNN3-214ENST00000580813 AAASQ9NRG9 546 aa12.26□□□□□ -0.45
VNN3-214ENST00000580813 TRIM66O15016 1216 aa12.25□□□□□ -0.45
VNN3-214ENST00000580813 PARP9Q8IXQ6 854 aa12.25□□□□□ -0.45
VNN3-214ENST00000580813 AK7Q96M32 723 aa12.25□□□□□ -0.45
VNN3-214ENST00000580813 MRGPRX2Q96LB1 330 aa12.24□□□□□ -0.45
VNN3-214ENST00000580813 NUDT12Q9BQG2 462 aa12.24□□□□□ -0.45
VNN3-214ENST00000580813 POTECB2RU33 542 aa12.22□□□□□ -0.45
VNN3-214ENST00000580813 SNIP1Q8TAD8 396 aaKnown RBP12.22□□□□□ -0.45
VNN3-214ENST00000580813 MS4A1P11836 297 aa12.2□□□□□ -0.46
VNN3-214ENST00000580813 RC3H1Q5TC82 1133 aaKnown RBP12.2□□□□□ -0.46
VNN3-214ENST00000580813 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
VNN3-214ENST00000580813 AXIN1O15169 862 aa12.19□□□□□ -0.46
VNN3-214ENST00000580813 AVPP01185 164 aa12.19□□□□□ -0.46
VNN3-214ENST00000580813 SKOR1P84550 965 aa12.19□□□□□ -0.46
VNN3-214ENST00000580813 MTMR2Q13614 643 aa12.19□□□□□ -0.46
VNN3-214ENST00000580813 PTCRAQ6ISU1 281 aaPredicted RBP12.19□□□□□ -0.46
VNN3-214ENST00000580813 WNT7BP56706 349 aa12.18□□□□□ -0.46
VNN3-214ENST00000580813 DIXDC1Q155Q3 683 aa12.18□□□□□ -0.46
VNN3-214ENST00000580813 PRR7Q8TB68 274 aa12.18□□□□□ -0.46
VNN3-214ENST00000580813 ZNF775Q96BV0 537 aaPredicted RBP12.18□□□□□ -0.46
VNN3-214ENST00000580813 J3QL48 77 aa12.17□□□□□ -0.46
VNN3-214ENST00000580813 CCNYL3P0C7X3 344 aa12.17□□□□□ -0.46
VNN3-214ENST00000580813 SMPD1P17405 629 aa12.17□□□□□ -0.46
VNN3-214ENST00000580813 CRIPAKQ8N1N5 446 aa12.17□□□□□ -0.46
VNN3-214ENST00000580813 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
VNN3-214ENST00000580813 DACH1Q9UI36 760 aa12.16□□□□□ -0.46
VNN3-214ENST00000580813 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
VNN3-214ENST00000580813 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.46
VNN3-214ENST00000580813 SLC24A3Q9HC58 644 aa12.15□□□□□ -0.46
VNN3-214ENST00000580813 PDE4DQ08499 809 aa12.14□□□□□ -0.47
VNN3-214ENST00000580813 PTPRNQ16849 979 aa12.14□□□□□ -0.47
VNN3-214ENST00000580813 PCDHB15Q9Y5E8 787 aa12.14□□□□□ -0.47
VNN3-214ENST00000580813 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
VNN3-214ENST00000580813 GJA5P36382 358 aa12.11□□□□□ -0.47
VNN3-214ENST00000580813 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
VNN3-214ENST00000580813 EHBP1Q8NDI1 1231 aa12.11□□□□□ -0.47
VNN3-214ENST00000580813 UNC93B1Q9H1C4 597 aa12.11□□□□□ -0.47
VNN3-214ENST00000580813 SPTLC1O15269 473 aa12.1□□□□□ -0.47
VNN3-214ENST00000580813 ALDH1A1P00352 501 aa12.1□□□□□ -0.47
VNN3-214ENST00000580813 CSPP1Q1MSJ5 1256 aa12.1□□□□□ -0.47
VNN3-214ENST00000580813 RIC3Q7Z5B4 369 aa12.1□□□□□ -0.47
VNN3-214ENST00000580813 GMPR2Q9P2T1 348 aaKnown RBP12.1□□□□□ -0.47
VNN3-214ENST00000580813 KCNH2Q12809 1159 aa12.09□□□□□ -0.47
VNN3-214ENST00000580813 LINC01559Q495D7 138 aa12.09□□□□□ -0.47
VNN3-214ENST00000580813 DESI1Q6ICB0 168 aa12.09□□□□□ -0.47
VNN3-214ENST00000580813 HPS1Q92902 700 aa12.09□□□□□ -0.47
VNN3-214ENST00000580813 HRCP23327 699 aa12.08□□□□□ -0.48
VNN3-214ENST00000580813 SH3BP2P78314 561 aa12.08□□□□□ -0.48
VNN3-214ENST00000580813 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
VNN3-214ENST00000580813 CTHP32929 405 aa12.07□□□□□ -0.48
VNN3-214ENST00000580813 BAP1Q92560 729 aa12.07□□□□□ -0.48
VNN3-214ENST00000580813 C11orf95C9JLR9 678 aaPredicted RBP12.06□□□□□ -0.48
VNN3-214ENST00000580813 CFAP99D6REC4 459 aa12.06□□□□□ -0.48
VNN3-214ENST00000580813 CABLES1Q8TDN4 633 aa12.06□□□□□ -0.48
VNN3-214ENST00000580813 SIAH2O43255 324 aa12.04□□□□□ -0.48
VNN3-214ENST00000580813 LYPD8Q6UX82 237 aa12.04□□□□□ -0.48
VNN3-214ENST00000580813 PRPF38BQ5VTL8 546 aaKnown RBP12.03□□□□□ -0.48
VNN3-214ENST00000580813 MYSM1Q5VVJ2 828 aa12.03□□□□□ -0.48
VNN3-214ENST00000580813 TSC1Q92574 1164 aa12.03□□□□□ -0.48
VNN3-214ENST00000580813 ATP13A2Q9NQ11 1180 aa12.03□□□□□ -0.48
VNN3-214ENST00000580813 WASF2Q9Y6W5 498 aa12.03□□□□□ -0.48
VNN3-214ENST00000580813 NUTM2BA6NNL0 878 aaPredicted RBP12.02□□□□□ -0.49
VNN3-214ENST00000580813 NUTM2EB1AL46 878 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms