RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 SPDYE2Q495Y8 402 aa11.18□□□□□ -0.62
KPNB1-210ENST00000580573 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
KPNB1-210ENST00000580573 TECPR2O15040 1411 aa11.18□□□□□ -0.62
KPNB1-210ENST00000580573 XRN1Q8IZH2 1706 aaKnown RBP11.16□□□□□ -0.62
KPNB1-210ENST00000580573 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
KPNB1-210ENST00000580573 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
KPNB1-210ENST00000580573 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
KPNB1-210ENST00000580573 DISP3Q9P2K9 1392 aa11.15□□□□□ -0.63
KPNB1-210ENST00000580573 HDGFP51858 240 aaKnown RBP11.14□□□□□ -0.63
KPNB1-210ENST00000580573 LRPPRCP42704 1394 aaKnown RBP11.14□□□□□ -0.63
KPNB1-210ENST00000580573 TULP4Q9NRJ4 1543 aa11.14□□□□□ -0.63
KPNB1-210ENST00000580573 SLC24A1O60721 1099 aa11.13□□□□□ -0.63
KPNB1-210ENST00000580573 THEMISQ8N1K5 641 aaPredicted RBP11.13□□□□□ -0.63
KPNB1-210ENST00000580573 CHD2O14647 1828 aaKnown RBP11.13□□□□□ -0.63
KPNB1-210ENST00000580573 ABCC11Q96J66 1382 aa11.13□□□□□ -0.63
KPNB1-210ENST00000580573 ADGRB2O60241 1585 aa11.12□□□□□ -0.63
KPNB1-210ENST00000580573 LTKP29376 864 aa11.12□□□□□ -0.63
KPNB1-210ENST00000580573 NUTM2DQ5VT03 806 aaPredicted RBP11.12□□□□□ -0.63
KPNB1-210ENST00000580573 FAM135BQ49AJ0 1406 aa11.11□□□□□ -0.63
KPNB1-210ENST00000580573 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
KPNB1-210ENST00000580573 DDX10Q13206 875 aaKnown RBP11.11□□□□□ -0.63
KPNB1-210ENST00000580573 METP08581 1390 aa11.11□□□□□ -0.63
KPNB1-210ENST00000580573 CENPJQ9HC77 1338 aaPredicted RBP11.1□□□□□ -0.63
KPNB1-210ENST00000580573 TMEM132EQ6IEE7 984 aa11.1□□□□□ -0.63
KPNB1-210ENST00000580573 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
KPNB1-210ENST00000580573 PTCH1Q13635 1447 aa11.09□□□□□ -0.63
KPNB1-210ENST00000580573 NWD1Q149M9 1564 aa11.09□□□□□ -0.63
KPNB1-210ENST00000580573 PIK3R4Q99570 1358 aa11.09□□□□□ -0.63
KPNB1-210ENST00000580573 TMF1P82094 1093 aa11.09□□□□□ -0.63
KPNB1-210ENST00000580573 SIRT1Q96EB6 747 aa11.09□□□□□ -0.63
KPNB1-210ENST00000580573 PUS7Q96PZ0 661 aaKnown RBP11.09□□□□□ -0.63
KPNB1-210ENST00000580573 USP32Q8NFA0 1604 aa11.09□□□□□ -0.63
KPNB1-210ENST00000580573 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.07□□□□□ -0.64
KPNB1-210ENST00000580573 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
KPNB1-210ENST00000580573 TXNDC2Q86VQ3 553 aa11.07□□□□□ -0.64
KPNB1-210ENST00000580573 TBX22Q9Y458 520 aa11.07□□□□□ -0.64
KPNB1-210ENST00000580573 EID1Q9Y6B2 187 aa11.07□□□□□ -0.64
KPNB1-210ENST00000580573 PTPRUQ92729 1446 aa11.07□□□□□ -0.64
KPNB1-210ENST00000580573 TOPAZ1Q8N9V7 1692 aa11.06□□□□□ -0.64
KPNB1-210ENST00000580573 CDCA8Q53HL2 280 aa11.06□□□□□ -0.64
KPNB1-210ENST00000580573 TRAK1Q9UPV9 953 aa11.06□□□□□ -0.64
KPNB1-210ENST00000580573 LMTK3Q96Q04 1460 aa11.06□□□□□ -0.64
KPNB1-210ENST00000580573 MIER1Q8N108 512 aa11.05□□□□□ -0.64
KPNB1-210ENST00000580573 STRCQ7RTU9 1775 aa11.05□□□□□ -0.64
KPNB1-210ENST00000580573 NPHP4O75161 1426 aaPredicted RBP11.04□□□□□ -0.64
KPNB1-210ENST00000580573 ROBO2Q9HCK4 1378 aa11.03□□□□□ -0.64
KPNB1-210ENST00000580573 PLEKHH1Q9ULM0 1364 aa11.03□□□□□ -0.64
KPNB1-210ENST00000580573 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
KPNB1-210ENST00000580573 NALCNQ8IZF0 1738 aa11.02□□□□□ -0.65
KPNB1-210ENST00000580573 PER1O15534 1290 aaPredicted RBP11.02□□□□□ -0.65
KPNB1-210ENST00000580573 ANKLE2Q86XL3 938 aa11.02□□□□□ -0.65
KPNB1-210ENST00000580573 AKAP12Q02952 1782 aa11.02□□□□□ -0.65
KPNB1-210ENST00000580573 KTN1Q86UP2 1357 aaKnown RBP11.02□□□□□ -0.65
KPNB1-210ENST00000580573 NPC1L1Q9UHC9 1359 aa11.02□□□□□ -0.65
KPNB1-210ENST00000580573 ITSN1Q15811 1721 aa11.01□□□□□ -0.65
KPNB1-210ENST00000580573 ANKRD26Q9UPS8 1709 aa11.01□□□□□ -0.65
KPNB1-210ENST00000580573 PRAM1Q96QH2 718 aa11.01□□□□□ -0.65
KPNB1-210ENST00000580573 EVC2Q86UK5 1308 aa11.01□□□□□ -0.65
KPNB1-210ENST00000580573 MON2Q7Z3U7 1717 aa11.01□□□□□ -0.65
KPNB1-210ENST00000580573 FMN2Q9NZ56 1722 aa11.01□□□□□ -0.65
KPNB1-210ENST00000580573 STRCP1A6NGW2 1772 aa11□□□□□ -0.65
KPNB1-210ENST00000580573 CDC42BPGQ6DT37 1551 aa11□□□□□ -0.65
KPNB1-210ENST00000580573 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
KPNB1-210ENST00000580573 CCER2I3L3R5 266 aa10.99□□□□□ -0.65
KPNB1-210ENST00000580573 STK26Q9P289 416 aa10.99□□□□□ -0.65
KPNB1-210ENST00000580573 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
KPNB1-210ENST00000580573 NKTRP30414 1462 aaKnown RBP10.99□□□□□ -0.65
KPNB1-210ENST00000580573 ATP7BP35670 1465 aa10.99□□□□□ -0.65
KPNB1-210ENST00000580573 ANP32CO43423 234 aa10.98□□□□□ -0.65
KPNB1-210ENST00000580573 SLC26A8Q96RN1 970 aa10.98□□□□□ -0.65
KPNB1-210ENST00000580573 PRKRIP1Q9H875 184 aaPredicted RBP10.98□□□□□ -0.65
KPNB1-210ENST00000580573 PARD3Q8TEW0 1356 aa10.98□□□□□ -0.65
KPNB1-210ENST00000580573 NRKQ7Z2Y5 1582 aa10.98□□□□□ -0.65
KPNB1-210ENST00000580573 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
KPNB1-210ENST00000580573 ANKRD36BQ8N2N9 1353 aa10.97□□□□□ -0.65
KPNB1-210ENST00000580573 RGPD8O14715 1765 aaPredicted RBP10.97□□□□□ -0.65
KPNB1-210ENST00000580573 WAPLQ7Z5K2 1190 aa10.96□□□□□ -0.65
KPNB1-210ENST00000580573 IFNLR1Q8IU57 520 aaPredicted RBP10.96□□□□□ -0.65
KPNB1-210ENST00000580573 PANK3Q9H999 370 aa10.96□□□□□ -0.65
KPNB1-210ENST00000580573 POGKQ9P215 609 aa10.96□□□□□ -0.65
KPNB1-210ENST00000580573 AMOTL2Q9Y2J4 779 aa10.96□□□□□ -0.65
KPNB1-210ENST00000580573 XIRP1Q702N8 1843 aaKnown RBP10.95□□□□□ -0.66
KPNB1-210ENST00000580573 MINK1Q8N4C8 1332 aaPredicted RBP10.94□□□□□ -0.66
KPNB1-210ENST00000580573 WASLO00401 505 aaPredicted RBP10.94□□□□□ -0.66
KPNB1-210ENST00000580573 CPSF1Q10570 1443 aaKnown RBP10.93□□□□□ -0.66
KPNB1-210ENST00000580573 ANKARQ7Z5J8 1434 aa10.93□□□□□ -0.66
KPNB1-210ENST00000580573 ADGRL3Q9HAR2 1447 aa10.93□□□□□ -0.66
KPNB1-210ENST00000580573 USP54Q70EL1 1684 aa10.93□□□□□ -0.66
KPNB1-210ENST00000580573 BCANQ96GW7 911 aa10.93□□□□□ -0.66
KPNB1-210ENST00000580573 POLR3GLQ9BT43 218 aa10.93□□□□□ -0.66
KPNB1-210ENST00000580573 CDK19Q9BWU1 502 aa10.93□□□□□ -0.66
KPNB1-210ENST00000580573 A0A1W2PP64 1363 aa10.92□□□□□ -0.66
KPNB1-210ENST00000580573 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
KPNB1-210ENST00000580573 KCNA6P17658 529 aa10.92□□□□□ -0.66
KPNB1-210ENST00000580573 SAFB2Q14151 953 aaKnown RBP eCLIP10.92□□□□□ -0.66
KPNB1-210ENST00000580573 RALBP1Q15311 655 aa10.92□□□□□ -0.66
KPNB1-210ENST00000580573 CARD14Q9BXL6 1004 aa10.92□□□□□ -0.66
KPNB1-210ENST00000580573 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
KPNB1-210ENST00000580573 NCOA3Q9Y6Q9 1424 aa10.92□□□□□ -0.66
KPNB1-210ENST00000580573 NSD2O96028 1365 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms