RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 FAM187AA6NFU0 413 aa7.97□□□□□ -1.13
CDH8-206ENST00000580044 CENPBP07199 599 aaPredicted RBP7.97□□□□□ -1.13
CDH8-206ENST00000580044 LMOD2Q6P5Q4 547 aa7.96□□□□□ -1.14
CDH8-206ENST00000580044 LIAT1Q6ZQX7 453 aa7.95□□□□□ -1.14
CDH8-206ENST00000580044 BICRAQ9NZM4 1560 aa7.95□□□□□ -1.14
CDH8-206ENST00000580044 TNFRSF10AO00220 468 aa7.94□□□□□ -1.14
CDH8-206ENST00000580044 RPIAP49247 311 aa7.94□□□□□ -1.14
CDH8-206ENST00000580044 FUT2Q10981 343 aa7.94□□□□□ -1.14
CDH8-206ENST00000580044 Q3C1V9 767 aa7.94□□□□□ -1.14
CDH8-206ENST00000580044 SOGA1O94964 1423 aa7.94□□□□□ -1.14
CDH8-206ENST00000580044 GCGRP47871 477 aa7.93□□□□□ -1.14
CDH8-206ENST00000580044 FOXC1Q12948 553 aa7.93□□□□□ -1.14
CDH8-206ENST00000580044 ACIN1Q9UKV3 1341 aaKnown RBP7.93□□□□□ -1.14
CDH8-206ENST00000580044 MORN1Q5T089 497 aa7.92□□□□□ -1.14
CDH8-206ENST00000580044 CYP4X1Q8N118 509 aa7.92□□□□□ -1.14
CDH8-206ENST00000580044 KRI1Q8N9T8 703 aaKnown RBP7.92□□□□□ -1.14
CDH8-206ENST00000580044 SALL2Q9Y467 1007 aaPredicted RBP7.92□□□□□ -1.14
CDH8-206ENST00000580044 SYNJ1O43426 1573 aa7.92□□□□□ -1.14
CDH8-206ENST00000580044 FECHP22830 423 aa7.91□□□□□ -1.14
CDH8-206ENST00000580044 BIVM-ERCC5R4GMW8 1640 aa7.91□□□□□ -1.14
CDH8-206ENST00000580044 MYT1Q01538 1121 aa7.9□□□□□ -1.14
CDH8-206ENST00000580044 DIEXFQ68CQ4 756 aaKnown RBP7.9□□□□□ -1.14
CDH8-206ENST00000580044 TRIM67Q6ZTA4 783 aa7.9□□□□□ -1.14
CDH8-206ENST00000580044 SLC27A5Q9Y2P5 690 aa7.9□□□□□ -1.14
CDH8-206ENST00000580044 FCF1Q9Y324 198 aaKnown RBP7.9□□□□□ -1.14
CDH8-206ENST00000580044 VPS8Q8N3P4 1428 aa7.89□□□□□ -1.15
CDH8-206ENST00000580044 LCE2BO14633 110 aa7.89□□□□□ -1.15
CDH8-206ENST00000580044 GDF9O60383 454 aa7.89□□□□□ -1.15
CDH8-206ENST00000580044 TOP2BQ02880 1626 aa7.89□□□□□ -1.15
CDH8-206ENST00000580044 ERICH3Q5RHP9 1530 aa7.88□□□□□ -1.15
CDH8-206ENST00000580044 TTC24A2A3L6 582 aaPredicted RBP7.87□□□□□ -1.15
CDH8-206ENST00000580044 MAP2K5Q13163 448 aa7.87□□□□□ -1.15
CDH8-206ENST00000580044 CLIP1P30622 1438 aa7.86□□□□□ -1.15
CDH8-206ENST00000580044 UBTFP17480 764 aaKnown RBP7.86□□□□□ -1.15
CDH8-206ENST00000580044 USP46P62068 366 aa7.86□□□□□ -1.15
CDH8-206ENST00000580044 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
CDH8-206ENST00000580044 NLRP7Q8WX94 980 aa7.86□□□□□ -1.15
CDH8-206ENST00000580044 EMID1Q96A84 441 aaPredicted RBP7.86□□□□□ -1.15
CDH8-206ENST00000580044 RUSC2Q8N2Y8 1516 aa7.86□□□□□ -1.15
CDH8-206ENST00000580044 ATAD2BQ9ULI0 1458 aa7.86□□□□□ -1.15
CDH8-206ENST00000580044 PRDM2Q13029 1718 aa7.86□□□□□ -1.15
CDH8-206ENST00000580044 KDM4AO75164 1064 aa7.85□□□□□ -1.15
CDH8-206ENST00000580044 BRICD5Q6PL45 260 aa7.85□□□□□ -1.15
CDH8-206ENST00000580044 VSIG10Q8N0Z9 540 aa7.85□□□□□ -1.15
CDH8-206ENST00000580044 MINK1Q8N4C8 1332 aaPredicted RBP7.84□□□□□ -1.15
CDH8-206ENST00000580044 GPR37O15354 613 aa7.84□□□□□ -1.15
CDH8-206ENST00000580044 PLA2G2CQ5R387 149 aa7.84□□□□□ -1.15
CDH8-206ENST00000580044 ZNF775Q96BV0 537 aaPredicted RBP7.84□□□□□ -1.15
CDH8-206ENST00000580044 THAP11Q96EK4 314 aa7.84□□□□□ -1.15
CDH8-206ENST00000580044 CLSPNQ9HAW4 1339 aa7.83□□□□□ -1.16
CDH8-206ENST00000580044 AXIN1O15169 862 aa7.83□□□□□ -1.16
CDH8-206ENST00000580044 CTC1Q2NKJ3 1217 aa7.83□□□□□ -1.16
CDH8-206ENST00000580044 NUTM1Q86Y26 1132 aa7.83□□□□□ -1.16
CDH8-206ENST00000580044 FAM160A2Q8N612 972 aaPredicted RBP7.83□□□□□ -1.16
CDH8-206ENST00000580044 USB1Q9BQ65 265 aaKnown RBP7.83□□□□□ -1.16
CDH8-206ENST00000580044 HMGXB3Q12766 1538 aa7.83□□□□□ -1.16
CDH8-206ENST00000580044 IRF6O14896 467 aa7.82□□□□□ -1.16
CDH8-206ENST00000580044 CLCN1P35523 988 aa7.82□□□□□ -1.16
CDH8-206ENST00000580044 CCDC24Q8N4L8 307 aa7.82□□□□□ -1.16
CDH8-206ENST00000580044 REPIN1Q9BWE0 567 aaKnown RBP7.82□□□□□ -1.16
CDH8-206ENST00000580044 CD46P15529 392 aa7.81□□□□□ -1.16
CDH8-206ENST00000580044 NEUROD1Q13562 356 aa7.81□□□□□ -1.16
CDH8-206ENST00000580044 PKD2L1Q9P0L9 805 aa7.81□□□□□ -1.16
CDH8-206ENST00000580044 MDM2Q00987 491 aaPredicted RBP7.8□□□□□ -1.16
CDH8-206ENST00000580044 RNF19BQ6ZMZ0 732 aa7.8□□□□□ -1.16
CDH8-206ENST00000580044 PHOX2BQ99453 314 aa7.8□□□□□ -1.16
CDH8-206ENST00000580044 AAASQ9NRG9 546 aa7.8□□□□□ -1.16
CDH8-206ENST00000580044 SNIP1Q8TAD8 396 aaKnown RBP7.79□□□□□ -1.16
CDH8-206ENST00000580044 C11orf95C9JLR9 678 aaPredicted RBP7.78□□□□□ -1.16
CDH8-206ENST00000580044 WNT7AO00755 349 aa7.78□□□□□ -1.16
CDH8-206ENST00000580044 ST8SIA5O15466 376 aa7.78□□□□□ -1.16
CDH8-206ENST00000580044 TRIM32Q13049 653 aa7.78□□□□□ -1.16
CDH8-206ENST00000580044 CRIPAKQ8N1N5 446 aa7.78□□□□□ -1.16
CDH8-206ENST00000580044 GPCPD1Q9NPB8 672 aa7.78□□□□□ -1.16
CDH8-206ENST00000580044 PRDM9Q9NQV7 894 aa7.78□□□□□ -1.16
CDH8-206ENST00000580044 TOR4AQ9NXH8 423 aa7.78□□□□□ -1.16
CDH8-206ENST00000580044 GTF3C3Q9Y5Q9 886 aa7.78□□□□□ -1.16
CDH8-206ENST00000580044 RAPGEF2Q9Y4G8 1499 aa7.78□□□□□ -1.16
CDH8-206ENST00000580044 PRXQ9BXM0 1461 aa7.77□□□□□ -1.17
CDH8-206ENST00000580044 MMP16P51512 607 aa7.77□□□□□ -1.17
CDH8-206ENST00000580044 AVPP01185 164 aa7.76□□□□□ -1.17
CDH8-206ENST00000580044 KDM2AQ9Y2K7 1162 aa7.76□□□□□ -1.17
CDH8-206ENST00000580044 SENP2Q9HC62 589 aa7.75□□□□□ -1.17
CDH8-206ENST00000580044 CUX2O14529 1486 aa7.75□□□□□ -1.17
CDH8-206ENST00000580044 DXOO77932 396 aaKnown RBP7.74□□□□□ -1.17
CDH8-206ENST00000580044 SMCPP49901 116 aaPredicted RBP7.74□□□□□ -1.17
CDH8-206ENST00000580044 CCDC102AQ96A19 550 aa7.74□□□□□ -1.17
CDH8-206ENST00000580044 ARAP1Q96P48 1450 aa7.74□□□□□ -1.17
CDH8-206ENST00000580044 MAP3K1Q13233 1512 aa7.73□□□□□ -1.17
CDH8-206ENST00000580044 KIF27Q86VH2 1401 aa7.73□□□□□ -1.17
CDH8-206ENST00000580044 RRBP1Q9P2E9 1410 aaKnown RBP7.73□□□□□ -1.17
CDH8-206ENST00000580044 HOXA2O43364 376 aa7.73□□□□□ -1.17
CDH8-206ENST00000580044 WNT7BP56706 349 aa7.73□□□□□ -1.17
CDH8-206ENST00000580044 NCAPD3P42695 1498 aa7.73□□□□□ -1.17
CDH8-206ENST00000580044 TTBK1Q5TCY1 1321 aaPredicted RBP7.73□□□□□ -1.17
CDH8-206ENST00000580044 POTECB2RU33 542 aa7.72□□□□□ -1.17
CDH8-206ENST00000580044 TREML4Q6UXN2 200 aa7.72□□□□□ -1.17
CDH8-206ENST00000580044 MRGPRX2Q96LB1 330 aa7.72□□□□□ -1.17
CDH8-206ENST00000580044 C6orf229H3BNL8 230 aa7.71□□□□□ -1.18
CDH8-206ENST00000580044 JUNDP17535 347 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms