RNA–Protein interactions for RNA: ENST00000579916.5

CCDC178-208, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC178, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-208ENST00000579916 RNF223E7ERA6 249 aa9.86□□□□□ -0.83
CCDC178-208ENST00000579916 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
CCDC178-208ENST00000579916 FAM160A2Q8N612 972 aaPredicted RBP9.86□□□□□ -0.83
CCDC178-208ENST00000579916 GJA5P36382 358 aa9.85□□□□□ -0.83
CCDC178-208ENST00000579916 ANKLE1Q8NAG6 615 aa9.85□□□□□ -0.83
CCDC178-208ENST00000579916 GUCA2AQ02747 115 aa9.84□□□□□ -0.83
CCDC178-208ENST00000579916 TBC1D2Q9BYX2 928 aa9.84□□□□□ -0.83
CCDC178-208ENST00000579916 MOXD2PA6NHM9 499 aa9.83□□□□□ -0.84
CCDC178-208ENST00000579916 FDX1P10109 184 aa9.83□□□□□ -0.84
CCDC178-208ENST00000579916 PCDHGC3Q9UN70 934 aa9.83□□□□□ -0.84
CCDC178-208ENST00000579916 USB1Q9BQ65 265 aaKnown RBP9.82□□□□□ -0.84
CCDC178-208ENST00000579916 MMP16P51512 607 aa9.81□□□□□ -0.84
CCDC178-208ENST00000579916 TPRNQ4KMQ1 711 aa9.81□□□□□ -0.84
CCDC178-208ENST00000579916 NDUFV2P19404 249 aa9.8□□□□□ -0.84
CCDC178-208ENST00000579916 RSBN1LQ6PCB5 846 aaPredicted RBP9.8□□□□□ -0.84
CCDC178-208ENST00000579916 KDM4CQ9H3R0 1056 aa9.8□□□□□ -0.84
CCDC178-208ENST00000579916 GPBP1L1Q9HC44 474 aaPredicted RBP9.8□□□□□ -0.84
CCDC178-208ENST00000579916 PRDM9Q9NQV7 894 aa9.8□□□□□ -0.84
CCDC178-208ENST00000579916 PPEF1O14829 653 aaPredicted RBP9.79□□□□□ -0.84
CCDC178-208ENST00000579916 SPTLC1O15269 473 aa9.79□□□□□ -0.84
CCDC178-208ENST00000579916 RETREG3Q86VR2 466 aa9.79□□□□□ -0.84
CCDC178-208ENST00000579916 EMID1Q96A84 441 aaPredicted RBP9.79□□□□□ -0.84
CCDC178-208ENST00000579916 POTECB2RU33 542 aa9.78□□□□□ -0.84
CCDC178-208ENST00000579916 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
CCDC178-208ENST00000579916 TUSC1Q2TAM9 212 aa9.78□□□□□ -0.84
CCDC178-208ENST00000579916 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
CCDC178-208ENST00000579916 PLA2G2CQ5R387 149 aa9.76□□□□□ -0.85
CCDC178-208ENST00000579916 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
CCDC178-208ENST00000579916 DDRGK1Q96HY6 314 aa9.76□□□□□ -0.85
CCDC178-208ENST00000579916 RIC3Q7Z5B4 369 aa9.75□□□□□ -0.85
CCDC178-208ENST00000579916 FCF1Q9Y324 198 aaKnown RBP9.75□□□□□ -0.85
CCDC178-208ENST00000579916 SPDYE5A6NIY4 337 aa9.74□□□□□ -0.85
CCDC178-208ENST00000579916 MTMR2Q13614 643 aa9.74□□□□□ -0.85
CCDC178-208ENST00000579916 PRPF38BQ5VTL8 546 aaKnown RBP9.74□□□□□ -0.85
CCDC178-208ENST00000579916 TRIM67Q6ZTA4 783 aa9.74□□□□□ -0.85
CCDC178-208ENST00000579916 RSPH6AQ9H0K4 717 aa9.74□□□□□ -0.85
CCDC178-208ENST00000579916 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
CCDC178-208ENST00000579916 JUNDP17535 347 aa9.73□□□□□ -0.85
CCDC178-208ENST00000579916 SLC19A1P41440 591 aa9.73□□□□□ -0.85
CCDC178-208ENST00000579916 LIAT1Q6ZQX7 453 aa9.73□□□□□ -0.85
CCDC178-208ENST00000579916 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
CCDC178-208ENST00000579916 PLEKHG3A1L390 1219 aa9.72□□□□□ -0.85
CCDC178-208ENST00000579916 RPIAP49247 311 aa9.72□□□□□ -0.85
CCDC178-208ENST00000579916 SPRYD7Q5W111 196 aa9.72□□□□□ -0.85
CCDC178-208ENST00000579916 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
CCDC178-208ENST00000579916 PCDHB15Q9Y5E8 787 aa9.72□□□□□ -0.85
CCDC178-208ENST00000579916 MYT1Q01538 1121 aa9.71□□□□□ -0.86
CCDC178-208ENST00000579916 DESI1Q6ICB0 168 aa9.71□□□□□ -0.86
CCDC178-208ENST00000579916 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
CCDC178-208ENST00000579916 HRCP23327 699 aa9.7□□□□□ -0.86
CCDC178-208ENST00000579916 CLK2P49760 499 aaKnown RBP9.7□□□□□ -0.86
CCDC178-208ENST00000579916 BRPF1P55201 1214 aaPredicted RBP9.7□□□□□ -0.86
CCDC178-208ENST00000579916 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
CCDC178-208ENST00000579916 NEUROD2Q15784 382 aa9.69□□□□□ -0.86
CCDC178-208ENST00000579916 ZNF598Q86UK7 904 aaKnown RBP9.69□□□□□ -0.86
CCDC178-208ENST00000579916 PRR7Q8TB68 274 aa9.69□□□□□ -0.86
CCDC178-208ENST00000579916 LILRB3O75022 631 aa9.68□□□□□ -0.86
CCDC178-208ENST00000579916 SKIV2LQ15477 1246 aaKnown RBP9.68□□□□□ -0.86
CCDC178-208ENST00000579916 PKDCCQ504Y2 493 aa9.67□□□□□ -0.86
CCDC178-208ENST00000579916 QPCTQ16769 361 aa9.66□□□□□ -0.86
CCDC178-208ENST00000579916 PTPRNQ16849 979 aa9.66□□□□□ -0.86
CCDC178-208ENST00000579916 CABLES1Q8TDN4 633 aa9.66□□□□□ -0.86
CCDC178-208ENST00000579916 CFAP99D6REC4 459 aa9.65□□□□□ -0.86
CCDC178-208ENST00000579916 NUDT12Q9BQG2 462 aa9.65□□□□□ -0.86
CCDC178-208ENST00000579916 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC178-208ENST00000579916 GOPCQ9HD26 462 aa9.65□□□□□ -0.86
CCDC178-208ENST00000579916 PRR20EP86478 221 aa9.64□□□□□ -0.87
CCDC178-208ENST00000579916 PRR20CP86479 221 aa9.64□□□□□ -0.87
CCDC178-208ENST00000579916 PRR20DP86480 221 aa9.64□□□□□ -0.87
CCDC178-208ENST00000579916 PRR20BP86481 221 aa9.64□□□□□ -0.87
CCDC178-208ENST00000579916 PRR20AP86496 221 aa9.64□□□□□ -0.87
CCDC178-208ENST00000579916 LCE2AQ5TA79 106 aaPredicted RBP9.64□□□□□ -0.87
CCDC178-208ENST00000579916 ZNF697Q5TEC3 545 aa9.64□□□□□ -0.87
CCDC178-208ENST00000579916 CCNYL3P0C7X3 344 aa9.63□□□□□ -0.87
CCDC178-208ENST00000579916 CSPP1Q1MSJ5 1256 aa9.63□□□□□ -0.87
CCDC178-208ENST00000579916 POLR3EQ9NVU0 708 aa9.63□□□□□ -0.87
CCDC178-208ENST00000579916 ZBTB24O43167 697 aaPredicted RBP9.62□□□□□ -0.87
CCDC178-208ENST00000579916 GDF9O60383 454 aa9.62□□□□□ -0.87
CCDC178-208ENST00000579916 DGAT1O75907 488 aa9.62□□□□□ -0.87
CCDC178-208ENST00000579916 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
CCDC178-208ENST00000579916 PRKCSHP14314 528 aaPredicted RBP9.62□□□□□ -0.87
CCDC178-208ENST00000579916 LYPD8Q6UX82 237 aa9.62□□□□□ -0.87
CCDC178-208ENST00000579916 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
CCDC178-208ENST00000579916 TRIM32Q13049 653 aa9.61□□□□□ -0.87
CCDC178-208ENST00000579916 PPP2R2DQ66LE6 453 aa9.61□□□□□ -0.87
CCDC178-208ENST00000579916 EVA1BQ9NVM1 165 aa9.61□□□□□ -0.87
CCDC178-208ENST00000579916 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
CCDC178-208ENST00000579916 CCDC24Q8N4L8 307 aa9.6□□□□□ -0.87
CCDC178-208ENST00000579916 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
CCDC178-208ENST00000579916 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
CCDC178-208ENST00000579916 NUTM2DQ5VT03 806 aaPredicted RBP9.59□□□□□ -0.87
CCDC178-208ENST00000579916 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
CCDC178-208ENST00000579916 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
CCDC178-208ENST00000579916 PROCA1Q8NCQ7 364 aaPredicted RBP9.59□□□□□ -0.87
CCDC178-208ENST00000579916 PKD2L1Q9P0L9 805 aa9.59□□□□□ -0.87
CCDC178-208ENST00000579916 ST8SIA5O15466 376 aa9.58□□□□□ -0.88
CCDC178-208ENST00000579916 F12P00748 615 aaPredicted RBP9.58□□□□□ -0.88
CCDC178-208ENST00000579916 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
CCDC178-208ENST00000579916 FBXO31Q5XUX0 539 aaPredicted RBP9.58□□□□□ -0.88
CCDC178-208ENST00000579916 FAM187AA6NFU0 413 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms