RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 TCP11L2Q8N4U5 519 aa18.57■□□□□ 0.56
ITGB4-206ENST00000579662 POGZQ7Z3K3 1410 aa18.56■□□□□ 0.56
ITGB4-206ENST00000579662 ERBINQ96RT1 1412 aa18.56■□□□□ 0.56
ITGB4-206ENST00000579662 ANO2Q9NQ90 1003 aa18.56■□□□□ 0.56
ITGB4-206ENST00000579662 CCDC141Q6ZP82 1450 aa18.56■□□□□ 0.56
ITGB4-206ENST00000579662 SYTL4Q96C24 671 aaPredicted RBP18.56■□□□□ 0.56
ITGB4-206ENST00000579662 MEX3CQ5U5Q3 659 aaKnown RBP18.56■□□□□ 0.56
ITGB4-206ENST00000579662 CDK13Q14004 1512 aaKnown RBP18.56■□□□□ 0.56
ITGB4-206ENST00000579662 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
ITGB4-206ENST00000579662 RIC3Q7Z5B4 369 aa18.55■□□□□ 0.56
ITGB4-206ENST00000579662 PLEKHO1Q53GL0 409 aaPredicted RBP18.55■□□□□ 0.56
ITGB4-206ENST00000579662 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
ITGB4-206ENST00000579662 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
ITGB4-206ENST00000579662 DDX49Q9Y6V7 483 aaKnown RBP18.55■□□□□ 0.56
ITGB4-206ENST00000579662 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
ITGB4-206ENST00000579662 FOXD4L5Q5VV16 416 aaPredicted RBP18.54■□□□□ 0.56
ITGB4-206ENST00000579662 FOXD4L4Q8WXT5 416 aaPredicted RBP18.54■□□□□ 0.56
ITGB4-206ENST00000579662 PCF11O94913 1555 aaKnown RBP18.54■□□□□ 0.56
ITGB4-206ENST00000579662 FANCIQ9NVI1 1328 aa18.54■□□□□ 0.56
ITGB4-206ENST00000579662 UBTFL1P0CB47 393 aaPredicted RBP18.54■□□□□ 0.56
ITGB4-206ENST00000579662 TRIM29Q14134 588 aa18.54■□□□□ 0.56
ITGB4-206ENST00000579662 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
ITGB4-206ENST00000579662 GNAI3P08754 354 aa18.53■□□□□ 0.56
ITGB4-206ENST00000579662 TRDNQ13061 729 aa18.53■□□□□ 0.56
ITGB4-206ENST00000579662 VPS37DQ86XT2 251 aa18.53■□□□□ 0.56
ITGB4-206ENST00000579662 MAP3K1Q13233 1512 aa18.53■□□□□ 0.56
ITGB4-206ENST00000579662 CDK19Q9BWU1 502 aa18.52■□□□□ 0.56
ITGB4-206ENST00000579662 ATAD2Q6PL18 1390 aa18.52■□□□□ 0.56
ITGB4-206ENST00000579662 PRKAR2BP31323 418 aa18.52■□□□□ 0.55
ITGB4-206ENST00000579662 NBPF8Q3BBV2 869 aa18.52■□□□□ 0.55
ITGB4-206ENST00000579662 ESCO1Q5FWF5 840 aa18.52■□□□□ 0.55
ITGB4-206ENST00000579662 MSH5O43196 834 aa18.52■□□□□ 0.55
ITGB4-206ENST00000579662 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.55
ITGB4-206ENST00000579662 KIF14Q15058 1648 aa18.51■□□□□ 0.55
ITGB4-206ENST00000579662 PROSER2Q86WR7 435 aaPredicted RBP18.51■□□□□ 0.55
ITGB4-206ENST00000579662 NINLQ9Y2I6 1382 aa18.51■□□□□ 0.55
ITGB4-206ENST00000579662 RTEL1-TNFRSF6BF6WH68 1400 aa18.51■□□□□ 0.55
ITGB4-206ENST00000579662 PANK1Q8TE04 598 aa18.51■□□□□ 0.55
ITGB4-206ENST00000579662 WWC1Q8IX03 1113 aa18.5■□□□□ 0.55
ITGB4-206ENST00000579662 TRIM34Q9BYJ4 488 aa18.5■□□□□ 0.55
ITGB4-206ENST00000579662 CHMP5Q9NZZ3 219 aa18.5■□□□□ 0.55
ITGB4-206ENST00000579662 CDC45O75419 566 aa18.5■□□□□ 0.55
ITGB4-206ENST00000579662 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
ITGB4-206ENST00000579662 VPS53Q5VIR6 699 aa18.5■□□□□ 0.55
ITGB4-206ENST00000579662 CPLX1O14810 134 aa18.49■□□□□ 0.55
ITGB4-206ENST00000579662 APPP05067 770 aa18.49■□□□□ 0.55
ITGB4-206ENST00000579662 NAIPQ13075 1403 aa18.49■□□□□ 0.55
ITGB4-206ENST00000579662 CAMSAP2Q08AD1 1489 aa18.49■□□□□ 0.55
ITGB4-206ENST00000579662 LNPKQ9C0E8 428 aa18.49■□□□□ 0.55
ITGB4-206ENST00000579662 GOLGA6L19H0YKK7 550 aa18.48■□□□□ 0.55
ITGB4-206ENST00000579662 TPM3P06753 285 aa18.48■□□□□ 0.55
ITGB4-206ENST00000579662 MCTP1Q6DN14 999 aa18.48■□□□□ 0.55
ITGB4-206ENST00000579662 GRIN2AQ12879 1464 aa18.48■□□□□ 0.55
ITGB4-206ENST00000579662 TPD52L1Q16890 204 aaPredicted RBP18.48■□□□□ 0.55
ITGB4-206ENST00000579662 PDE3AQ14432 1141 aa18.47■□□□□ 0.55
ITGB4-206ENST00000579662 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
ITGB4-206ENST00000579662 NOC3LQ8WTT2 800 aaKnown RBP18.47■□□□□ 0.55
ITGB4-206ENST00000579662 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
ITGB4-206ENST00000579662 PTPN23Q9H3S7 1636 aa18.47■□□□□ 0.55
ITGB4-206ENST00000579662 NUCB2P80303 420 aa18.47■□□□□ 0.55
ITGB4-206ENST00000579662 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
ITGB4-206ENST00000579662 TPM2P07951 284 aa18.46■□□□□ 0.55
ITGB4-206ENST00000579662 ERICH2A1L162 156 aa18.46■□□□□ 0.55
ITGB4-206ENST00000579662 AIMP1Q12904 312 aaKnown RBP18.46■□□□□ 0.55
ITGB4-206ENST00000579662 CABP1Q9NZU7 370 aa18.46■□□□□ 0.55
ITGB4-206ENST00000579662 SLC4A3P48751 1232 aa18.46■□□□□ 0.55
ITGB4-206ENST00000579662 CREBRFQ8IUR6 639 aa18.46■□□□□ 0.55
ITGB4-206ENST00000579662 WDR63Q8IWG1 891 aa18.46■□□□□ 0.55
ITGB4-206ENST00000579662 BECN2A8MW95 431 aa18.46■□□□□ 0.55
ITGB4-206ENST00000579662 TWISTNBQ3B726 338 aaPredicted RBP18.46■□□□□ 0.55
ITGB4-206ENST00000579662 C22orf23Q9BZE7 217 aa18.46■□□□□ 0.55
ITGB4-206ENST00000579662 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
ITGB4-206ENST00000579662 EXOSC9Q06265 439 aaKnown RBP18.45■□□□□ 0.54
ITGB4-206ENST00000579662 RAPGEF3O95398 923 aa18.44■□□□□ 0.54
ITGB4-206ENST00000579662 TATP17735 454 aaPredicted RBP18.44■□□□□ 0.54
ITGB4-206ENST00000579662 CNTROBQ8N137 903 aa18.44■□□□□ 0.54
ITGB4-206ENST00000579662 ANKLE2Q86XL3 938 aa18.44■□□□□ 0.54
ITGB4-206ENST00000579662 SMC3Q9UQE7 1217 aa18.44■□□□□ 0.54
ITGB4-206ENST00000579662 TSR1Q2NL82 804 aaKnown RBP18.43■□□□□ 0.54
ITGB4-206ENST00000579662 GSE1Q14687 1217 aa18.43■□□□□ 0.54
ITGB4-206ENST00000579662 CCDC47Q96A33 483 aaKnown RBP18.43■□□□□ 0.54
ITGB4-206ENST00000579662 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
ITGB4-206ENST00000579662 HOOK1Q9UJC3 728 aaKnown RBP18.43■□□□□ 0.54
ITGB4-206ENST00000579662 TPM1P09493 284 aa18.43■□□□□ 0.54
ITGB4-206ENST00000579662 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
ITGB4-206ENST00000579662 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
ITGB4-206ENST00000579662 NFXL1Q6ZNB6 911 aa18.42■□□□□ 0.54
ITGB4-206ENST00000579662 CLASRPQ8N2M8 674 aaKnown RBP18.42■□□□□ 0.54
ITGB4-206ENST00000579662 NEUROD6Q96NK8 337 aa18.42■□□□□ 0.54
ITGB4-206ENST00000579662 CDCA7LQ96GN5 454 aa18.41■□□□□ 0.54
ITGB4-206ENST00000579662 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
ITGB4-206ENST00000579662 PSMA5P28066 241 aa18.41■□□□□ 0.54
ITGB4-206ENST00000579662 CD109Q6YHK3 1445 aa18.41■□□□□ 0.54
ITGB4-206ENST00000579662 HIP1O00291 1037 aa18.41■□□□□ 0.54
ITGB4-206ENST00000579662 RALYLQ86SE5 291 aaKnown RBP18.4■□□□□ 0.54
ITGB4-206ENST00000579662 CEP89Q96ST8 783 aa18.4■□□□□ 0.54
ITGB4-206ENST00000579662 CTDP1Q9Y5B0 961 aaPredicted RBP18.4■□□□□ 0.54
ITGB4-206ENST00000579662 ABCC5O15440 1437 aa18.4■□□□□ 0.54
ITGB4-206ENST00000579662 CCT4P50991 539 aaKnown RBP18.39■□□□□ 0.54
ITGB4-206ENST00000579662 AKNAQ7Z591 1439 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms