RNA–Protein interactions for RNA: ENST00000579511.1

DDX42-209, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-209ENST00000579511 PCDHGC3Q9UN70 934 aa9.95□□□□□ -0.82
DDX42-209ENST00000579511 MOXD2PA6NHM9 499 aa9.94□□□□□ -0.82
DDX42-209ENST00000579511 FDX1P10109 184 aa9.94□□□□□ -0.82
DDX42-209ENST00000579511 SYMPKQ92797 1274 aaKnown RBP9.94□□□□□ -0.82
DDX42-209ENST00000579511 TBC1D2Q9BYX2 928 aa9.94□□□□□ -0.82
DDX42-209ENST00000579511 FCF1Q9Y324 198 aaKnown RBP9.93□□□□□ -0.82
DDX42-209ENST00000579511 MMP16P51512 607 aa9.92□□□□□ -0.82
DDX42-209ENST00000579511 SPRYD7Q5W111 196 aa9.91□□□□□ -0.82
DDX42-209ENST00000579511 DIXDC1Q155Q3 683 aa9.9□□□□□ -0.82
DDX42-209ENST00000579511 C6orf229H3BNL8 230 aa9.89□□□□□ -0.83
DDX42-209ENST00000579511 GFRA3O60609 400 aa9.89□□□□□ -0.83
DDX42-209ENST00000579511 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
DDX42-209ENST00000579511 ZNF598Q86UK7 904 aaKnown RBP9.88□□□□□ -0.83
DDX42-209ENST00000579511 RETREG3Q86VR2 466 aa9.88□□□□□ -0.83
DDX42-209ENST00000579511 GJA5P36382 358 aa9.87□□□□□ -0.83
DDX42-209ENST00000579511 LAPTM4AQ15012 233 aa9.87□□□□□ -0.83
DDX42-209ENST00000579511 RSBN1LQ6PCB5 846 aaPredicted RBP9.87□□□□□ -0.83
DDX42-209ENST00000579511 PDZRN3Q9UPQ7 1066 aa9.87□□□□□ -0.83
DDX42-209ENST00000579511 RPIAP49247 311 aa9.86□□□□□ -0.83
DDX42-209ENST00000579511 PCDHB15Q9Y5E8 787 aa9.86□□□□□ -0.83
DDX42-209ENST00000579511 SPTLC1O15269 473 aa9.85□□□□□ -0.83
DDX42-209ENST00000579511 ZNF697Q5TEC3 545 aa9.85□□□□□ -0.83
DDX42-209ENST00000579511 TRIM67Q6ZTA4 783 aa9.85□□□□□ -0.83
DDX42-209ENST00000579511 RIC3Q7Z5B4 369 aa9.85□□□□□ -0.83
DDX42-209ENST00000579511 GPBP1L1Q9HC44 474 aaPredicted RBP9.85□□□□□ -0.83
DDX42-209ENST00000579511 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
DDX42-209ENST00000579511 JUNDP17535 347 aa9.84□□□□□ -0.83
DDX42-209ENST00000579511 MTMR2Q13614 643 aa9.84□□□□□ -0.83
DDX42-209ENST00000579511 MYSM1Q5VVJ2 828 aa9.84□□□□□ -0.83
DDX42-209ENST00000579511 KDM4CQ9H3R0 1056 aa9.84□□□□□ -0.83
DDX42-209ENST00000579511 NRG2O14511 850 aaPredicted RBP9.83□□□□□ -0.84
DDX42-209ENST00000579511 SPDYE5A6NIY4 337 aa9.82□□□□□ -0.84
DDX42-209ENST00000579511 ZBTB24O43167 697 aaPredicted RBP9.82□□□□□ -0.84
DDX42-209ENST00000579511 CCDC24Q8N4L8 307 aa9.82□□□□□ -0.84
DDX42-209ENST00000579511 PRR7Q8TB68 274 aa9.82□□□□□ -0.84
DDX42-209ENST00000579511 Q6ZNB5 142 aa9.81□□□□□ -0.84
DDX42-209ENST00000579511 LIMD1Q9UGP4 676 aa9.81□□□□□ -0.84
DDX42-209ENST00000579511 HRCP23327 699 aa9.8□□□□□ -0.84
DDX42-209ENST00000579511 CSPP1Q1MSJ5 1256 aa9.8□□□□□ -0.84
DDX42-209ENST00000579511 RSPH6AQ9H0K4 717 aa9.8□□□□□ -0.84
DDX42-209ENST00000579511 GDF9O60383 454 aa9.79□□□□□ -0.84
DDX42-209ENST00000579511 PRR20EP86478 221 aa9.79□□□□□ -0.84
DDX42-209ENST00000579511 PRR20CP86479 221 aa9.79□□□□□ -0.84
DDX42-209ENST00000579511 PRR20DP86480 221 aa9.79□□□□□ -0.84
DDX42-209ENST00000579511 PRR20BP86481 221 aa9.79□□□□□ -0.84
DDX42-209ENST00000579511 PRR20AP86496 221 aa9.79□□□□□ -0.84
DDX42-209ENST00000579511 PRPF38BQ5VTL8 546 aaKnown RBP9.79□□□□□ -0.84
DDX42-209ENST00000579511 CABLES1Q8TDN4 633 aa9.79□□□□□ -0.84
DDX42-209ENST00000579511 FAM117AQ9C073 453 aa9.79□□□□□ -0.84
DDX42-209ENST00000579511 ZBTB3Q9H5J0 574 aa9.79□□□□□ -0.84
DDX42-209ENST00000579511 TNFRSF10AO00220 468 aa9.78□□□□□ -0.84
DDX42-209ENST00000579511 FOXC1Q12948 553 aa9.78□□□□□ -0.84
DDX42-209ENST00000579511 TRIM32Q13049 653 aa9.78□□□□□ -0.84
DDX42-209ENST00000579511 NUDT12Q9BQG2 462 aa9.78□□□□□ -0.84
DDX42-209ENST00000579511 PKD2L1Q9P0L9 805 aa9.78□□□□□ -0.84
DDX42-209ENST00000579511 CFAP99D6REC4 459 aa9.77□□□□□ -0.85
DDX42-209ENST00000579511 QPCTQ16769 361 aa9.77□□□□□ -0.85
DDX42-209ENST00000579511 TUSC1Q2TAM9 212 aa9.77□□□□□ -0.85
DDX42-209ENST00000579511 TPRNQ4KMQ1 711 aa9.77□□□□□ -0.85
DDX42-209ENST00000579511 DESI1Q6ICB0 168 aa9.77□□□□□ -0.85
DDX42-209ENST00000579511 POLR3EQ9NVU0 708 aa9.77□□□□□ -0.85
DDX42-209ENST00000579511 PTCRAQ6ISU1 281 aaPredicted RBP9.76□□□□□ -0.85
DDX42-209ENST00000579511 DDRGK1Q96HY6 314 aa9.76□□□□□ -0.85
DDX42-209ENST00000579511 CCNYL3P0C7X3 344 aa9.75□□□□□ -0.85
DDX42-209ENST00000579511 CLK2P49760 499 aaKnown RBP9.75□□□□□ -0.85
DDX42-209ENST00000579511 PTPRNQ16849 979 aa9.75□□□□□ -0.85
DDX42-209ENST00000579511 PLEKHG3A1L390 1219 aa9.74□□□□□ -0.85
DDX42-209ENST00000579511 NUTM2BA6NNL0 878 aaPredicted RBP9.74□□□□□ -0.85
DDX42-209ENST00000579511 NUTM2EB1AL46 878 aaPredicted RBP9.74□□□□□ -0.85
DDX42-209ENST00000579511 LILRB3O75022 631 aa9.74□□□□□ -0.85
DDX42-209ENST00000579511 NUTM2DQ5VT03 806 aaPredicted RBP9.74□□□□□ -0.85
DDX42-209ENST00000579511 NUTM2AQ8IVF1 878 aaPredicted RBP9.74□□□□□ -0.85
DDX42-209ENST00000579511 LCE2BO14633 110 aa9.73□□□□□ -0.85
DDX42-209ENST00000579511 LYPD8Q6UX82 237 aa9.73□□□□□ -0.85
DDX42-209ENST00000579511 EVA1BQ9NVM1 165 aa9.73□□□□□ -0.85
DDX42-209ENST00000579511 WNT7AO00755 349 aa9.71□□□□□ -0.86
DDX42-209ENST00000579511 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
DDX42-209ENST00000579511 NEUROD2Q15784 382 aa9.71□□□□□ -0.86
DDX42-209ENST00000579511 RTL5Q5HYW3 569 aaPredicted RBP9.71□□□□□ -0.86
DDX42-209ENST00000579511 TRAF7Q6Q0C0 670 aa9.71□□□□□ -0.86
DDX42-209ENST00000579511 SKOR1P84550 965 aa9.7□□□□□ -0.86
DDX42-209ENST00000579511 KCNH2Q12809 1159 aa9.7□□□□□ -0.86
DDX42-209ENST00000579511 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
DDX42-209ENST00000579511 DGAT1O75907 488 aa9.69□□□□□ -0.86
DDX42-209ENST00000579511 WNT7BP56706 349 aa9.69□□□□□ -0.86
DDX42-209ENST00000579511 PKDCCQ504Y2 493 aa9.69□□□□□ -0.86
DDX42-209ENST00000579511 PROCA1Q8NCQ7 364 aaPredicted RBP9.69□□□□□ -0.86
DDX42-209ENST00000579511 TSC1Q92574 1164 aa9.69□□□□□ -0.86
DDX42-209ENST00000579511 UNC93B1Q9H1C4 597 aa9.69□□□□□ -0.86
DDX42-209ENST00000579511 TOR4AQ9NXH8 423 aa9.69□□□□□ -0.86
DDX42-209ENST00000579511 FAM187AA6NFU0 413 aa9.68□□□□□ -0.86
DDX42-209ENST00000579511 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
DDX42-209ENST00000579511 RC3H1Q5TC82 1133 aaKnown RBP9.68□□□□□ -0.86
DDX42-209ENST00000579511 CYP4X1Q8N118 509 aa9.68□□□□□ -0.86
DDX42-209ENST00000579511 MRGPRX2Q96LB1 330 aa9.68□□□□□ -0.86
DDX42-209ENST00000579511 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
DDX42-209ENST00000579511 CTHP32929 405 aa9.66□□□□□ -0.86
DDX42-209ENST00000579511 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDX42-209ENST00000579511 ATP1B4Q9UN42 357 aaPredicted RBP9.66□□□□□ -0.86
DDX42-209ENST00000579511 TTC24A2A3L6 582 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms