RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 WAPLQ7Z5K2 1190 aa19.5■□□□□ 0.71
CSNK1D-209ENST00000578904 POGKQ9P215 609 aa19.5■□□□□ 0.71
CSNK1D-209ENST00000578904 SLC24A1O60721 1099 aa19.49■□□□□ 0.71
CSNK1D-209ENST00000578904 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
CSNK1D-209ENST00000578904 SIRT1Q96EB6 747 aa19.49■□□□□ 0.71
CSNK1D-209ENST00000578904 XIRP1Q702N8 1843 aaKnown RBP19.48■□□□□ 0.71
CSNK1D-209ENST00000578904 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
CSNK1D-209ENST00000578904 NCOA3Q9Y6Q9 1424 aa19.48■□□□□ 0.71
CSNK1D-209ENST00000578904 NALCNQ8IZF0 1738 aa19.48■□□□□ 0.71
CSNK1D-209ENST00000578904 ADGRL3Q9HAR2 1447 aa19.47■□□□□ 0.71
CSNK1D-209ENST00000578904 CENPJQ9HC77 1338 aaPredicted RBP19.47■□□□□ 0.71
CSNK1D-209ENST00000578904 QRICH2Q9H0J4 1663 aa19.46■□□□□ 0.71
CSNK1D-209ENST00000578904 MSH6P52701 1360 aa19.45■□□□□ 0.7
CSNK1D-209ENST00000578904 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.45■□□□□ 0.7
CSNK1D-209ENST00000578904 ADGRB2O60241 1585 aa19.42■□□□□ 0.7
CSNK1D-209ENST00000578904 UBAP1LF5GYI3 381 aa19.42■□□□□ 0.7
CSNK1D-209ENST00000578904 MINK1Q8N4C8 1332 aaPredicted RBP19.42■□□□□ 0.7
CSNK1D-209ENST00000578904 CDC42BPGQ6DT37 1551 aa19.41■□□□□ 0.7
CSNK1D-209ENST00000578904 DCCP43146 1447 aa19.41■□□□□ 0.7
CSNK1D-209ENST00000578904 C19orf44Q9H6X5 657 aa19.4■□□□□ 0.7
CSNK1D-209ENST00000578904 ST20-MTHFSA0A0A6YYL1 179 aa19.39■□□□□ 0.69
CSNK1D-209ENST00000578904 HIRIP3Q9BW71 556 aaPredicted RBP19.39■□□□□ 0.69
CSNK1D-209ENST00000578904 SBNO2Q9Y2G9 1366 aa19.37■□□□□ 0.69
CSNK1D-209ENST00000578904 ATF3P18847 181 aa19.37■□□□□ 0.69
CSNK1D-209ENST00000578904 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
CSNK1D-209ENST00000578904 CDCA8Q53HL2 280 aa19.35■□□□□ 0.69
CSNK1D-209ENST00000578904 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
CSNK1D-209ENST00000578904 TMF1P82094 1093 aa19.34■□□□□ 0.69
CSNK1D-209ENST00000578904 TULP4Q9NRJ4 1543 aa19.34■□□□□ 0.69
CSNK1D-209ENST00000578904 EVC2Q86UK5 1308 aa19.32■□□□□ 0.68
CSNK1D-209ENST00000578904 WASLO00401 505 aaPredicted RBP19.32■□□□□ 0.68
CSNK1D-209ENST00000578904 MST1RQ04912 1400 aa19.32■□□□□ 0.68
CSNK1D-209ENST00000578904 TOM1O60784 492 aa19.31■□□□□ 0.68
CSNK1D-209ENST00000578904 DIEXFQ68CQ4 756 aaKnown RBP19.31■□□□□ 0.68
CSNK1D-209ENST00000578904 TESK2Q96S53 571 aa19.31■□□□□ 0.68
CSNK1D-209ENST00000578904 NUTM2FA1L443 756 aa19.3■□□□□ 0.68
CSNK1D-209ENST00000578904 CDK19Q9BWU1 502 aa19.3■□□□□ 0.68
CSNK1D-209ENST00000578904 ANKARQ7Z5J8 1434 aa19.29■□□□□ 0.68
CSNK1D-209ENST00000578904 SRPK2P78362 688 aaKnown RBP19.29■□□□□ 0.68
CSNK1D-209ENST00000578904 CCDC7Q96M83 1385 aa19.29■□□□□ 0.68
CSNK1D-209ENST00000578904 C1orf167Q5SNV9 1468 aa19.28■□□□□ 0.68
CSNK1D-209ENST00000578904 SLAIN2Q9P270 581 aa19.27■□□□□ 0.68
CSNK1D-209ENST00000578904 ATP7BP35670 1465 aa19.27■□□□□ 0.67
CSNK1D-209ENST00000578904 USP32Q8NFA0 1604 aa19.26■□□□□ 0.67
CSNK1D-209ENST00000578904 CABP2Q9NPB3 220 aa19.26■□□□□ 0.67
CSNK1D-209ENST00000578904 WASHC2AQ641Q2 1341 aa19.25■□□□□ 0.67
CSNK1D-209ENST00000578904 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
CSNK1D-209ENST00000578904 HSPA1LP34931 641 aa19.25■□□□□ 0.67
CSNK1D-209ENST00000578904 KIF7Q2M1P5 1343 aa19.25■□□□□ 0.67
CSNK1D-209ENST00000578904 PRR36Q9H6K5 1346 aa19.25■□□□□ 0.67
CSNK1D-209ENST00000578904 PIP4K2BP78356 416 aa19.24■□□□□ 0.67
CSNK1D-209ENST00000578904 DDX10Q13206 875 aaKnown RBP19.24■□□□□ 0.67
CSNK1D-209ENST00000578904 ITSN1Q15811 1721 aa19.24■□□□□ 0.67
CSNK1D-209ENST00000578904 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
CSNK1D-209ENST00000578904 NUDT16Q96DE0 195 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-209ENST00000578904 POLR3GLQ9BT43 218 aa19.23■□□□□ 0.67
CSNK1D-209ENST00000578904 TOPAZ1Q8N9V7 1692 aa19.23■□□□□ 0.67
CSNK1D-209ENST00000578904 ROBO1Q9Y6N7 1651 aa19.23■□□□□ 0.67
CSNK1D-209ENST00000578904 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-209ENST00000578904 ESCO1Q5FWF5 840 aa19.22■□□□□ 0.67
CSNK1D-209ENST00000578904 KIF1AQ12756 1690 aa19.21■□□□□ 0.67
CSNK1D-209ENST00000578904 PUS7Q96PZ0 661 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-209ENST00000578904 C11orf95C9JLR9 678 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-209ENST00000578904 BRINP3Q76B58 766 aa19.2■□□□□ 0.66
CSNK1D-209ENST00000578904 ORAI2Q96SN7 254 aa19.2■□□□□ 0.66
CSNK1D-209ENST00000578904 PPIP5K1Q6PFW1 1433 aa19.19■□□□□ 0.66
CSNK1D-209ENST00000578904 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
CSNK1D-209ENST00000578904 CCDC61Q9Y6R9 512 aa19.18■□□□□ 0.66
CSNK1D-209ENST00000578904 PHF8Q9UPP1 1060 aa19.17■□□□□ 0.66
CSNK1D-209ENST00000578904 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
CSNK1D-209ENST00000578904 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
CSNK1D-209ENST00000578904 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
CSNK1D-209ENST00000578904 NINLQ9Y2I6 1382 aa19.15■□□□□ 0.66
CSNK1D-209ENST00000578904 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.66
CSNK1D-209ENST00000578904 CABP1Q9NZU7 370 aa19.14■□□□□ 0.65
CSNK1D-209ENST00000578904 AHDC1Q5TGY3 1603 aaPredicted RBP19.14■□□□□ 0.65
CSNK1D-209ENST00000578904 NGDNQ8NEJ9 315 aaKnown RBP19.13■□□□□ 0.65
CSNK1D-209ENST00000578904 MYOM1P52179 1685 aa19.13■□□□□ 0.65
CSNK1D-209ENST00000578904 NPHP3Q7Z494 1330 aa19.12■□□□□ 0.65
CSNK1D-209ENST00000578904 PLEKHG3A1L390 1219 aa19.12■□□□□ 0.65
CSNK1D-209ENST00000578904 ACEP12821 1306 aa19.11■□□□□ 0.65
CSNK1D-209ENST00000578904 FOXO3O43524 673 aa19.11■□□□□ 0.65
CSNK1D-209ENST00000578904 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
CSNK1D-209ENST00000578904 POLR3AO14802 1390 aaPredicted RBP19.1■□□□□ 0.65
CSNK1D-209ENST00000578904 ANP32CO43423 234 aa19.1■□□□□ 0.65
CSNK1D-209ENST00000578904 SLC12A5Q9H2X9 1139 aa19.1■□□□□ 0.65
CSNK1D-209ENST00000578904 PHLPP1O60346 1717 aa19.1■□□□□ 0.65
CSNK1D-209ENST00000578904 XPCQ01831 940 aaPredicted RBP19.08■□□□□ 0.64
CSNK1D-209ENST00000578904 PSME1Q06323 249 aa19.08■□□□□ 0.64
CSNK1D-209ENST00000578904 AKAP12Q02952 1782 aa19.08■□□□□ 0.64
CSNK1D-209ENST00000578904 PXDNQ92626 1479 aa19.08■□□□□ 0.64
CSNK1D-209ENST00000578904 HDGFL2Q7Z4V5 671 aaPredicted RBP19.07■□□□□ 0.64
CSNK1D-209ENST00000578904 TERF2IPQ9NYB0 399 aa19.07■□□□□ 0.64
CSNK1D-209ENST00000578904 CD163L1Q9NR16 1453 aa19.07■□□□□ 0.64
CSNK1D-209ENST00000578904 COL16A1Q07092 1604 aaPredicted RBP19.07■□□□□ 0.64
CSNK1D-209ENST00000578904 A0A1W2PP64 1363 aa19.06■□□□□ 0.64
CSNK1D-209ENST00000578904 ANKRD36BQ8N2N9 1353 aa19.06■□□□□ 0.64
CSNK1D-209ENST00000578904 KRT28Q7Z3Y7 464 aa19.06■□□□□ 0.64
CSNK1D-209ENST00000578904 USP6P35125 1406 aa19.06■□□□□ 0.64
CSNK1D-209ENST00000578904 CPSF1Q10570 1443 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms