RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 CEP350Q5VT06 3117 aa9.9□□□□□ -0.82
UBB-208ENST00000578706 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.82
UBB-208ENST00000578706 E9PCH4 1651 aa9.9□□□□□ -0.83
UBB-208ENST00000578706 EN1Q05925 392 aaPredicted RBP9.89□□□□□ -0.83
UBB-208ENST00000578706 UNC5CLQ8IV45 518 aa9.89□□□□□ -0.83
UBB-208ENST00000578706 PLCH1Q4KWH8 1693 aa9.89□□□□□ -0.83
UBB-208ENST00000578706 DAPK1P53355 1430 aa9.89□□□□□ -0.83
UBB-208ENST00000578706 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
UBB-208ENST00000578706 SENP3-EIF4A1A0A087X0R7 540 aa9.88□□□□□ -0.83
UBB-208ENST00000578706 BAG6P46379 1132 aa9.88□□□□□ -0.83
UBB-208ENST00000578706 UTRNP46939 3433 aa9.88□□□□□ -0.83
UBB-208ENST00000578706 IQGAP3Q86VI3 1631 aa9.88□□□□□ -0.83
UBB-208ENST00000578706 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
UBB-208ENST00000578706 DISP2A7MBM2 1401 aa9.87□□□□□ -0.83
UBB-208ENST00000578706 CHGAP10645 457 aaKnown RBP9.86□□□□□ -0.83
UBB-208ENST00000578706 KRT27Q7Z3Y8 459 aa9.86□□□□□ -0.83
UBB-208ENST00000578706 ZNF784Q8NCA9 323 aaPredicted RBP9.86□□□□□ -0.83
UBB-208ENST00000578706 NWD2Q9ULI1 1742 aa9.86□□□□□ -0.83
UBB-208ENST00000578706 RREB1Q92766 1687 aa9.85□□□□□ -0.83
UBB-208ENST00000578706 ADGRL2O95490 1459 aa9.85□□□□□ -0.83
UBB-208ENST00000578706 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
UBB-208ENST00000578706 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
UBB-208ENST00000578706 NRAPQ86VF7 1730 aa9.84□□□□□ -0.83
UBB-208ENST00000578706 ABCA3Q99758 1704 aa9.84□□□□□ -0.83
UBB-208ENST00000578706 XPCQ01831 940 aaPredicted RBP9.83□□□□□ -0.84
UBB-208ENST00000578706 VPS72Q15906 364 aa9.83□□□□□ -0.84
UBB-208ENST00000578706 EZH2Q15910 746 aaKnown RBP9.83□□□□□ -0.84
UBB-208ENST00000578706 ROBO2Q9HCK4 1378 aa9.83□□□□□ -0.84
UBB-208ENST00000578706 C1QTNF8P60827 252 aa9.82□□□□□ -0.84
UBB-208ENST00000578706 ANKRD30AQ9BXX3 1397 aa9.82□□□□□ -0.84
UBB-208ENST00000578706 NPHP3Q7Z494 1330 aa9.82□□□□□ -0.84
UBB-208ENST00000578706 CDC42BPGQ6DT37 1551 aa9.81□□□□□ -0.84
UBB-208ENST00000578706 NINLQ9Y2I6 1382 aa9.81□□□□□ -0.84
UBB-208ENST00000578706 FAM182BQ5T319 152 aa9.81□□□□□ -0.84
UBB-208ENST00000578706 CHIC2Q9UKJ5 165 aa9.81□□□□□ -0.84
UBB-208ENST00000578706 PRAG1Q86YV5 1406 aa9.81□□□□□ -0.84
UBB-208ENST00000578706 THSD7AQ9UPZ6 1657 aa9.8□□□□□ -0.84
UBB-208ENST00000578706 CAMKK2Q96RR4 588 aa9.8□□□□□ -0.84
UBB-208ENST00000578706 NEXMIFQ5QGS0 1516 aa9.8□□□□□ -0.84
UBB-208ENST00000578706 ADGRB2O60241 1585 aa9.8□□□□□ -0.84
UBB-208ENST00000578706 FOXO3O43524 673 aa9.79□□□□□ -0.84
UBB-208ENST00000578706 ANKRD50Q9ULJ7 1429 aa9.79□□□□□ -0.84
UBB-208ENST00000578706 CHD4Q14839 1912 aa9.78□□□□□ -0.84
UBB-208ENST00000578706 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
UBB-208ENST00000578706 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.85
UBB-208ENST00000578706 ESCO1Q5FWF5 840 aa9.77□□□□□ -0.85
UBB-208ENST00000578706 NRKQ7Z2Y5 1582 aa9.76□□□□□ -0.85
UBB-208ENST00000578706 CASZ1Q86V15 1759 aa9.76□□□□□ -0.85
UBB-208ENST00000578706 MYOM1P52179 1685 aa9.76□□□□□ -0.85
UBB-208ENST00000578706 CABLES1Q8TDN4 633 aa9.75□□□□□ -0.85
UBB-208ENST00000578706 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
UBB-208ENST00000578706 PARD3Q8TEW0 1356 aa9.75□□□□□ -0.85
UBB-208ENST00000578706 A0A0G2JS52 829 aa9.74□□□□□ -0.85
UBB-208ENST00000578706 MYT1Q01538 1121 aa9.74□□□□□ -0.85
UBB-208ENST00000578706 KIF1AQ12756 1690 aa9.74□□□□□ -0.85
UBB-208ENST00000578706 HFM1A2PYH4 1435 aa9.73□□□□□ -0.85
UBB-208ENST00000578706 VPS8Q8N3P4 1428 aa9.73□□□□□ -0.85
UBB-208ENST00000578706 KCNQ2O43526 872 aa9.73□□□□□ -0.85
UBB-208ENST00000578706 SPON1Q9HCB6 807 aa9.73□□□□□ -0.85
UBB-208ENST00000578706 PPP1R1BQ9UD71 204 aaPredicted RBP9.73□□□□□ -0.85
UBB-208ENST00000578706 FMN2Q9NZ56 1722 aa9.73□□□□□ -0.85
UBB-208ENST00000578706 TNS3Q68CZ2 1445 aa9.73□□□□□ -0.85
UBB-208ENST00000578706 CLTCL1P53675 1640 aa9.72□□□□□ -0.85
UBB-208ENST00000578706 FAM83GA6ND36 823 aa9.72□□□□□ -0.85
UBB-208ENST00000578706 TRIM37O94972 964 aa9.72□□□□□ -0.85
UBB-208ENST00000578706 RGPD8O14715 1765 aaPredicted RBP9.72□□□□□ -0.85
UBB-208ENST00000578706 CCDC144AA2RUR9 1427 aa9.72□□□□□ -0.85
UBB-208ENST00000578706 NAIPQ13075 1403 aa9.72□□□□□ -0.85
UBB-208ENST00000578706 DCAF8L1A6NGE4 600 aa9.71□□□□□ -0.86
UBB-208ENST00000578706 LRPPRCP42704 1394 aaKnown RBP9.71□□□□□ -0.86
UBB-208ENST00000578706 COL14A1Q05707 1796 aaKnown RBP9.7□□□□□ -0.86
UBB-208ENST00000578706 NUTM2FA1L443 756 aa9.7□□□□□ -0.86
UBB-208ENST00000578706 APBA3O96018 575 aa9.69□□□□□ -0.86
UBB-208ENST00000578706 ZNF326Q5BKZ1 582 aaKnown RBP9.69□□□□□ -0.86
UBB-208ENST00000578706 SPATA31A5Q5VU36 1347 aa9.69□□□□□ -0.86
UBB-208ENST00000578706 SPATA31A7Q8IWB4 1347 aa9.69□□□□□ -0.86
UBB-208ENST00000578706 CRYBG1Q9Y4K1 1723 aa9.69□□□□□ -0.86
UBB-208ENST00000578706 SHANK3Q9BYB0 1731 aa9.68□□□□□ -0.86
UBB-208ENST00000578706 PLEKHG5O94827 1062 aa9.68□□□□□ -0.86
UBB-208ENST00000578706 PDGFDQ9GZP0 370 aaPredicted RBP9.68□□□□□ -0.86
UBB-208ENST00000578706 BTG4Q9NY30 223 aa9.68□□□□□ -0.86
UBB-208ENST00000578706 PTGER2P43116 358 aa9.67□□□□□ -0.86
UBB-208ENST00000578706 KRT28Q7Z3Y7 464 aa9.67□□□□□ -0.86
UBB-208ENST00000578706 TRPM3Q9HCF6 1732 aaPredicted RBP9.67□□□□□ -0.86
UBB-208ENST00000578706 KIF1BO60333 1816 aa9.66□□□□□ -0.86
UBB-208ENST00000578706 RGPD3A6NKT7 1758 aaPredicted RBP9.66□□□□□ -0.86
UBB-208ENST00000578706 RGPD4Q7Z3J3 1758 aa9.66□□□□□ -0.86
UBB-208ENST00000578706 IFT172Q9UG01 1749 aa9.66□□□□□ -0.86
UBB-208ENST00000578706 HAP1P54257 671 aaPredicted RBP9.66□□□□□ -0.86
UBB-208ENST00000578706 FAM196AQ6ZSG2 479 aa9.66□□□□□ -0.86
UBB-208ENST00000578706 RRBP1Q9P2E9 1410 aaKnown RBP9.65□□□□□ -0.86
UBB-208ENST00000578706 SBNO1A3KN83 1393 aa9.65□□□□□ -0.86
UBB-208ENST00000578706 PLEKHH1Q9ULM0 1364 aa9.65□□□□□ -0.86
UBB-208ENST00000578706 ALS2Q96Q42 1657 aa9.65□□□□□ -0.86
UBB-208ENST00000578706 GOLGB1Q14789 3259 aaKnown RBP9.65□□□□□ -0.86
UBB-208ENST00000578706 NBPF8Q3BBV2 869 aa9.65□□□□□ -0.86
UBB-208ENST00000578706 NBPF14Q5TI25 921 aa9.65□□□□□ -0.86
UBB-208ENST00000578706 ANO8Q9HCE9 1232 aaPredicted RBP9.65□□□□□ -0.86
UBB-208ENST00000578706 PPLO60437 1756 aa9.65□□□□□ -0.87
UBB-208ENST00000578706 NRXN1Q9ULB1 1477 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms