RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 LRPPRCP42704 1394 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-210ENST00000578557 PIK3C2GO75747 1445 aa12.34□□□□□ -0.43
PPP4R1-210ENST00000578557 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
PPP4R1-210ENST00000578557 PIP4K2BP78356 416 aa12.33□□□□□ -0.44
PPP4R1-210ENST00000578557 NRXN1Q9ULB1 1477 aa12.33□□□□□ -0.44
PPP4R1-210ENST00000578557 KIF1BO60333 1816 aa12.32□□□□□ -0.44
PPP4R1-210ENST00000578557 TECPR2O15040 1411 aa12.32□□□□□ -0.44
PPP4R1-210ENST00000578557 PTPRUQ92729 1446 aa12.31□□□□□ -0.44
PPP4R1-210ENST00000578557 KDM2AQ9Y2K7 1162 aa12.31□□□□□ -0.44
PPP4R1-210ENST00000578557 ALKQ9UM73 1620 aa12.3□□□□□ -0.44
PPP4R1-210ENST00000578557 CFAP70Q5T0N1 1121 aa12.3□□□□□ -0.44
PPP4R1-210ENST00000578557 REM2Q8IYK8 340 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-210ENST00000578557 POGKQ9P215 609 aa12.28□□□□□ -0.44
PPP4R1-210ENST00000578557 YTHDC2Q9H6S0 1430 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-210ENST00000578557 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
PPP4R1-210ENST00000578557 PROM2Q8N271 834 aa12.27□□□□□ -0.45
PPP4R1-210ENST00000578557 EIF3AQ14152 1382 aaKnown RBP12.27□□□□□ -0.45
PPP4R1-210ENST00000578557 HSPA1LP34931 641 aa12.26□□□□□ -0.45
PPP4R1-210ENST00000578557 TMEM132EQ6IEE7 984 aa12.26□□□□□ -0.45
PPP4R1-210ENST00000578557 L3MBTL2Q969R5 705 aa12.26□□□□□ -0.45
PPP4R1-210ENST00000578557 LRRC59Q96AG4 307 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-210ENST00000578557 STK26Q9P289 416 aa12.26□□□□□ -0.45
PPP4R1-210ENST00000578557 ROBO2Q9HCK4 1378 aa12.26□□□□□ -0.45
PPP4R1-210ENST00000578557 NEUROD1Q13562 356 aa12.25□□□□□ -0.45
PPP4R1-210ENST00000578557 CHD2O14647 1828 aaKnown RBP12.24□□□□□ -0.45
PPP4R1-210ENST00000578557 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
PPP4R1-210ENST00000578557 TONSLQ96HA7 1378 aa12.23□□□□□ -0.45
PPP4R1-210ENST00000578557 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
PPP4R1-210ENST00000578557 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
PPP4R1-210ENST00000578557 DLC1Q96QB1 1528 aa12.22□□□□□ -0.45
PPP4R1-210ENST00000578557 WAPLQ7Z5K2 1190 aa12.22□□□□□ -0.45
PPP4R1-210ENST00000578557 PRAM1Q96QH2 718 aa12.22□□□□□ -0.45
PPP4R1-210ENST00000578557 SIN3AQ96ST3 1273 aa12.22□□□□□ -0.45
PPP4R1-210ENST00000578557 PCGF6Q9BYE7 350 aa12.22□□□□□ -0.45
PPP4R1-210ENST00000578557 TRAK1Q9UPV9 953 aa12.22□□□□□ -0.45
PPP4R1-210ENST00000578557 PPLO60437 1756 aa12.21□□□□□ -0.45
PPP4R1-210ENST00000578557 SPATA31A6Q5VVP1 1343 aa12.21□□□□□ -0.45
PPP4R1-210ENST00000578557 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.45
PPP4R1-210ENST00000578557 PSME1Q06323 249 aa12.21□□□□□ -0.45
PPP4R1-210ENST00000578557 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-210ENST00000578557 LAMC1P11047 1609 aa12.21□□□□□ -0.46
PPP4R1-210ENST00000578557 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-210ENST00000578557 JCADQ9P266 1359 aa12.2□□□□□ -0.46
PPP4R1-210ENST00000578557 MST1RQ04912 1400 aa12.2□□□□□ -0.46
PPP4R1-210ENST00000578557 MYO5BQ9ULV0 1848 aa12.19□□□□□ -0.46
PPP4R1-210ENST00000578557 ESCO1Q5FWF5 840 aa12.19□□□□□ -0.46
PPP4R1-210ENST00000578557 C1orf167Q5SNV9 1468 aa12.19□□□□□ -0.46
PPP4R1-210ENST00000578557 WASLO00401 505 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-210ENST00000578557 PUS7Q96PZ0 661 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-210ENST00000578557 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
PPP4R1-210ENST00000578557 ANKARQ7Z5J8 1434 aa12.17□□□□□ -0.46
PPP4R1-210ENST00000578557 SOS2Q07890 1332 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-210ENST00000578557 CENPJQ9HC77 1338 aaPredicted RBP12.15□□□□□ -0.46
PPP4R1-210ENST00000578557 ADGRB1O14514 1584 aa12.15□□□□□ -0.46
PPP4R1-210ENST00000578557 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
PPP4R1-210ENST00000578557 NBPF1Q3BBV0 1214 aa12.15□□□□□ -0.46
PPP4R1-210ENST00000578557 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
PPP4R1-210ENST00000578557 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.46
PPP4R1-210ENST00000578557 ROCK2O75116 1388 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-210ENST00000578557 GPRASP1Q5JY77 1395 aa12.15□□□□□ -0.46
PPP4R1-210ENST00000578557 ORAI2Q96SN7 254 aa12.14□□□□□ -0.47
PPP4R1-210ENST00000578557 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-210ENST00000578557 IFT172Q9UG01 1749 aa12.14□□□□□ -0.47
PPP4R1-210ENST00000578557 EVC2Q86UK5 1308 aa12.13□□□□□ -0.47
PPP4R1-210ENST00000578557 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-210ENST00000578557 CARD11Q9BXL7 1154 aa12.13□□□□□ -0.47
PPP4R1-210ENST00000578557 CDC42BPGQ6DT37 1551 aa12.13□□□□□ -0.47
PPP4R1-210ENST00000578557 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
PPP4R1-210ENST00000578557 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
PPP4R1-210ENST00000578557 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-210ENST00000578557 SBNO2Q9Y2G9 1366 aa12.11□□□□□ -0.47
PPP4R1-210ENST00000578557 FOXO3O43524 673 aa12.11□□□□□ -0.47
PPP4R1-210ENST00000578557 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
PPP4R1-210ENST00000578557 KRT28Q7Z3Y7 464 aa12.11□□□□□ -0.47
PPP4R1-210ENST00000578557 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
PPP4R1-210ENST00000578557 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
PPP4R1-210ENST00000578557 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-210ENST00000578557 AHDC1Q5TGY3 1603 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-210ENST00000578557 SBNO1A3KN83 1393 aa12.1□□□□□ -0.47
PPP4R1-210ENST00000578557 DISP3Q9P2K9 1392 aa12.1□□□□□ -0.47
PPP4R1-210ENST00000578557 CDCA8Q53HL2 280 aa12.1□□□□□ -0.47
PPP4R1-210ENST00000578557 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-210ENST00000578557 NUDT16Q96DE0 195 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-210ENST00000578557 KIAA1210Q9ULL0 1709 aa12.1□□□□□ -0.47
PPP4R1-210ENST00000578557 ASXL1Q8IXJ9 1541 aa12.1□□□□□ -0.47
PPP4R1-210ENST00000578557 MINK1Q8N4C8 1332 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-210ENST00000578557 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
PPP4R1-210ENST00000578557 NGDNQ8NEJ9 315 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-210ENST00000578557 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.47
PPP4R1-210ENST00000578557 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
PPP4R1-210ENST00000578557 SRPK2P78362 688 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-210ENST00000578557 NBPF8Q3BBV2 869 aa12.08□□□□□ -0.48
PPP4R1-210ENST00000578557 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
PPP4R1-210ENST00000578557 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-210ENST00000578557 HIRIP3Q9BW71 556 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-210ENST00000578557 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
PPP4R1-210ENST00000578557 XIRP1Q702N8 1843 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-210ENST00000578557 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
PPP4R1-210ENST00000578557 NUTM2FA1L443 756 aa12.05□□□□□ -0.48
PPP4R1-210ENST00000578557 ADGRB2O60241 1585 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms