RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 C14orf37Q86TY3 774 aa17.09■□□□□ 0.33
IFT20-207ENST00000578547 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
IFT20-207ENST00000578547 ST20-MTHFSA0A0A6YYL1 179 aa17.08■□□□□ 0.32
IFT20-207ENST00000578547 HIRIP3Q9BW71 556 aaPredicted RBP17.08■□□□□ 0.32
IFT20-207ENST00000578547 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
IFT20-207ENST00000578547 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
IFT20-207ENST00000578547 C19orf44Q9H6X5 657 aa17.06■□□□□ 0.32
IFT20-207ENST00000578547 NALCNQ8IZF0 1738 aa17.06■□□□□ 0.32
IFT20-207ENST00000578547 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
IFT20-207ENST00000578547 ADGRL3Q9HAR2 1447 aa17.04■□□□□ 0.32
IFT20-207ENST00000578547 MSH6P52701 1360 aa17.02■□□□□ 0.32
IFT20-207ENST00000578547 IQSEC2Q5JU85 1478 aa17.02■□□□□ 0.32
IFT20-207ENST00000578547 ADGRB2O60241 1585 aa17.01■□□□□ 0.31
IFT20-207ENST00000578547 ATF3P18847 181 aa17■□□□□ 0.31
IFT20-207ENST00000578547 TESK2Q96S53 571 aa17■□□□□ 0.31
IFT20-207ENST00000578547 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
IFT20-207ENST00000578547 SBNO2Q9Y2G9 1366 aa17■□□□□ 0.31
IFT20-207ENST00000578547 CDC42BPGQ6DT37 1551 aa16.99■□□□□ 0.31
IFT20-207ENST00000578547 UBAP1LF5GYI3 381 aa16.98■□□□□ 0.31
IFT20-207ENST00000578547 CADPS2Q86UW7 1296 aa16.98■□□□□ 0.31
IFT20-207ENST00000578547 DISP3Q9P2K9 1392 aa16.98■□□□□ 0.31
IFT20-207ENST00000578547 EVC2Q86UK5 1308 aa16.97■□□□□ 0.31
IFT20-207ENST00000578547 TOM1O60784 492 aa16.97■□□□□ 0.31
IFT20-207ENST00000578547 TMF1P82094 1093 aa16.97■□□□□ 0.31
IFT20-207ENST00000578547 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
IFT20-207ENST00000578547 DCCP43146 1447 aa16.96■□□□□ 0.31
IFT20-207ENST00000578547 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
IFT20-207ENST00000578547 SRPK2P78362 688 aaKnown RBP16.96■□□□□ 0.31
IFT20-207ENST00000578547 NUTM2FA1L443 756 aa16.95■□□□□ 0.3
IFT20-207ENST00000578547 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
IFT20-207ENST00000578547 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
IFT20-207ENST00000578547 FMN2Q9NZ56 1722 aa16.95■□□□□ 0.3
IFT20-207ENST00000578547 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
IFT20-207ENST00000578547 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
IFT20-207ENST00000578547 MST1RQ04912 1400 aa16.93■□□□□ 0.3
IFT20-207ENST00000578547 PIP4K2BP78356 416 aa16.92■□□□□ 0.3
IFT20-207ENST00000578547 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
IFT20-207ENST00000578547 C1orf167Q5SNV9 1468 aa16.91■□□□□ 0.3
IFT20-207ENST00000578547 USP32Q8NFA0 1604 aa16.9■□□□□ 0.3
IFT20-207ENST00000578547 ORAI2Q96SN7 254 aa16.9■□□□□ 0.3
IFT20-207ENST00000578547 ATP7BP35670 1465 aa16.9■□□□□ 0.3
IFT20-207ENST00000578547 PRR36Q9H6K5 1346 aa16.9■□□□□ 0.3
IFT20-207ENST00000578547 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
IFT20-207ENST00000578547 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
IFT20-207ENST00000578547 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
IFT20-207ENST00000578547 KIF7Q2M1P5 1343 aa16.89■□□□□ 0.29
IFT20-207ENST00000578547 ANKARQ7Z5J8 1434 aa16.88■□□□□ 0.29
IFT20-207ENST00000578547 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
IFT20-207ENST00000578547 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
IFT20-207ENST00000578547 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
IFT20-207ENST00000578547 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
IFT20-207ENST00000578547 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
IFT20-207ENST00000578547 TOPAZ1Q8N9V7 1692 aa16.87■□□□□ 0.29
IFT20-207ENST00000578547 CCDC7Q96M83 1385 aa16.87■□□□□ 0.29
IFT20-207ENST00000578547 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
IFT20-207ENST00000578547 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
IFT20-207ENST00000578547 TMC1Q8TDI8 760 aa16.86■□□□□ 0.29
IFT20-207ENST00000578547 FBXO41Q8TF61 875 aa16.86■□□□□ 0.29
IFT20-207ENST00000578547 PPIP5K1Q6PFW1 1433 aa16.86■□□□□ 0.29
IFT20-207ENST00000578547 MYOM1P52179 1685 aa16.85■□□□□ 0.29
IFT20-207ENST00000578547 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
IFT20-207ENST00000578547 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
IFT20-207ENST00000578547 PUS7Q96PZ0 661 aaKnown RBP16.83■□□□□ 0.28
IFT20-207ENST00000578547 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
IFT20-207ENST00000578547 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
IFT20-207ENST00000578547 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
IFT20-207ENST00000578547 ROBO1Q9Y6N7 1651 aa16.81■□□□□ 0.28
IFT20-207ENST00000578547 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
IFT20-207ENST00000578547 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
IFT20-207ENST00000578547 FOXO3O43524 673 aa16.8■□□□□ 0.28
IFT20-207ENST00000578547 SLC12A5Q9H2X9 1139 aa16.8■□□□□ 0.28
IFT20-207ENST00000578547 NINLQ9Y2I6 1382 aa16.79■□□□□ 0.28
IFT20-207ENST00000578547 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
IFT20-207ENST00000578547 ACEP12821 1306 aa16.77■□□□□ 0.28
IFT20-207ENST00000578547 HSPA1LP34931 641 aa16.77■□□□□ 0.28
IFT20-207ENST00000578547 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
IFT20-207ENST00000578547 PSME1Q06323 249 aa16.76■□□□□ 0.27
IFT20-207ENST00000578547 HDGFL2Q7Z4V5 671 aaPredicted RBP16.76■□□□□ 0.27
IFT20-207ENST00000578547 A0A1W2PP64 1363 aa16.76■□□□□ 0.27
IFT20-207ENST00000578547 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
IFT20-207ENST00000578547 CD163L1Q9NR16 1453 aa16.75■□□□□ 0.27
IFT20-207ENST00000578547 AKAP12Q02952 1782 aa16.75■□□□□ 0.27
IFT20-207ENST00000578547 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
IFT20-207ENST00000578547 TERF2IPQ9NYB0 399 aa16.75■□□□□ 0.27
IFT20-207ENST00000578547 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
IFT20-207ENST00000578547 ANKRD36BQ8N2N9 1353 aa16.75■□□□□ 0.27
IFT20-207ENST00000578547 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
IFT20-207ENST00000578547 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
IFT20-207ENST00000578547 SOS2Q07890 1332 aaPredicted RBP16.73■□□□□ 0.27
IFT20-207ENST00000578547 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
IFT20-207ENST00000578547 PANK3Q9H999 370 aa16.73■□□□□ 0.27
IFT20-207ENST00000578547 AHDC1Q5TGY3 1603 aaPredicted RBP16.73■□□□□ 0.27
IFT20-207ENST00000578547 MON2Q7Z3U7 1717 aa16.73■□□□□ 0.27
IFT20-207ENST00000578547 CPSF1Q10570 1443 aaKnown RBP16.72■□□□□ 0.27
IFT20-207ENST00000578547 NHSL1Q5SYE7 1610 aa16.72■□□□□ 0.27
IFT20-207ENST00000578547 USP6P35125 1406 aa16.71■□□□□ 0.27
IFT20-207ENST00000578547 NSD3Q9BZ95 1437 aa16.71■□□□□ 0.27
IFT20-207ENST00000578547 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
IFT20-207ENST00000578547 PXDNQ92626 1479 aa16.71■□□□□ 0.27
IFT20-207ENST00000578547 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms